Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC5.47□□□□□ -1.53
SRGAP3O43295 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC5.47□□□□□ -1.53
SRGAP3O43295 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC5.47□□□□□ -1.53
SRGAP3O43295 AF235103.2-201ENST00000525753 346 ntBASIC5.47□□□□□ -1.53
SRGAP3O43295 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC5.47□□□□□ -1.53
SRGAP3O43295 AC125611.2-201ENST00000551907 647 ntBASIC5.47□□□□□ -1.53
SRGAP3O43295 CBX3P5-201ENST00000552017 521 ntBASIC5.47□□□□□ -1.53
SRGAP3O43295 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SRGAP3O43295 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC5.47□□□□□ -1.53
SRGAP3O43295 RPL21P5-201ENST00000554662 472 ntBASIC5.47□□□□□ -1.53
SRGAP3O43295 ATP5J2P6-201ENST00000565203 266 ntBASIC5.47□□□□□ -1.53
SRGAP3O43295 MIR4284-201ENST00000578924 81 ntBASIC5.47□□□□□ -1.53
SRGAP3O43295 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC5.47□□□□□ -1.53
SRGAP3O43295 AC022916.3-201ENST00000592961 742 ntBASIC5.47□□□□□ -1.53
SRGAP3O43295 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC5.47□□□□□ -1.53
SRGAP3O43295 AC113403.1-201ENST00000604910 193 ntBASIC5.47□□□□□ -1.53
SRGAP3O43295 Z98200.1-201ENST00000607298 470 ntBASIC5.47□□□□□ -1.53
SRGAP3O43295 SNORD91B-202ENST00000608459 222 ntBASIC5.47□□□□□ -1.53
SRGAP3O43295 MIR378J-201ENST00000611988 109 ntBASIC5.47□□□□□ -1.53
SRGAP3O43295 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
SRGAP3O43295 uc_338.13-201ENST00000618243 179 ntBASIC5.47□□□□□ -1.53
SRGAP3O43295 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.47□□□□□ -1.53
SRGAP3O43295 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.47□□□□□ -1.53
SRGAP3O43295 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SRGAP3O43295 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
SRGAP3O43295 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SRGAP3O43295 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SRGAP3O43295 HSPA8P17-201ENST00000427029 1382 ntBASIC5.46□□□□□ -1.54
SRGAP3O43295 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC5.46□□□□□ -1.54
SRGAP3O43295 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.46□□□□□ -1.54
SRGAP3O43295 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SRGAP3O43295 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SRGAP3O43295 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
SRGAP3O43295 RNU1-44P-201ENST00000384453 163 ntBASIC5.46□□□□□ -1.54
SRGAP3O43295 Y_RNA.529-201ENST00000384586 119 ntBASIC5.46□□□□□ -1.54
SRGAP3O43295 RNU4-25P-201ENST00000410569 230 ntBASIC5.46□□□□□ -1.54
SRGAP3O43295 SNORA74C-2-201ENST00000411179 201 ntBASIC5.46□□□□□ -1.54
SRGAP3O43295 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.46□□□□□ -1.54
SRGAP3O43295 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC5.46□□□□□ -1.54
SRGAP3O43295 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC5.46□□□□□ -1.54
SRGAP3O43295 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC5.46□□□□□ -1.54
SRGAP3O43295 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC5.46□□□□□ -1.54
SRGAP3O43295 ISCA1P6-201ENST00000427740 390 ntBASIC5.46□□□□□ -1.54
SRGAP3O43295 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC5.46□□□□□ -1.54
SRGAP3O43295 AC002486.1-201ENST00000435098 391 ntBASIC5.46□□□□□ -1.54
SRGAP3O43295 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC5.46□□□□□ -1.54
SRGAP3O43295 RPS27AP15-201ENST00000447672 466 ntBASIC5.46□□□□□ -1.54
SRGAP3O43295 Z82190.1-201ENST00000454534 490 ntBASIC5.46□□□□□ -1.54
SRGAP3O43295 AP000942.1-201ENST00000463969 747 ntBASIC5.46□□□□□ -1.54
SRGAP3O43295 AC022795.1-201ENST00000473808 480 ntBASIC5.46□□□□□ -1.54
SRGAP3O43295 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.46□□□□□ -1.54
SRGAP3O43295 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC5.46□□□□□ -1.54
SRGAP3O43295 OR51K1P-201ENST00000510214 950 ntBASIC5.46□□□□□ -1.54
SRGAP3O43295 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC5.46□□□□□ -1.54
SRGAP3O43295 Y_RNA.701-201ENST00000516812 110 ntBASIC5.46□□□□□ -1.54
SRGAP3O43295 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.46□□□□□ -1.54
SRGAP3O43295 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC5.46□□□□□ -1.54
SRGAP3O43295 AL359212.1-201ENST00000556608 614 ntBASIC5.46□□□□□ -1.54
SRGAP3O43295 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC5.46□□□□□ -1.54
SRGAP3O43295 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.46□□□□□ -1.54
SRGAP3O43295 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC5.46□□□□□ -1.54
SRGAP3O43295 AC025678.1-201ENST00000567861 338 ntBASIC5.46□□□□□ -1.54
SRGAP3O43295 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.46□□□□□ -1.54
SRGAP3O43295 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC5.46□□□□□ -1.54
SRGAP3O43295 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC5.46□□□□□ -1.54
SRGAP3O43295 NRBF2P5-201ENST00000603087 788 ntBASIC5.46□□□□□ -1.54
SRGAP3O43295 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC5.46□□□□□ -1.54
SRGAP3O43295 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC5.46□□□□□ -1.54
SRGAP3O43295 AC097468.3-201ENST00000607956 456 ntBASIC5.46□□□□□ -1.54
SRGAP3O43295 AC011944.2-201ENST00000624440 683 ntBASIC5.46□□□□□ -1.54
SRGAP3O43295 AC026634.1-201ENST00000634369 198 ntBASIC5.46□□□□□ -1.54
SRGAP3O43295 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
SRGAP3O43295 MTCO1P7-201ENST00000419523 1542 ntBASIC5.46□□□□□ -1.54
SRGAP3O43295 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC5.46□□□□□ -1.54
SRGAP3O43295 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SRGAP3O43295 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SRGAP3O43295 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC5.46□□□□□ -1.54
SRGAP3O43295 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
SRGAP3O43295 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SRGAP3O43295 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.45□□□□□ -1.54
SRGAP3O43295 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
SRGAP3O43295 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.45□□□□□ -1.54
SRGAP3O43295 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC5.45□□□□□ -1.54
SRGAP3O43295 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.45□□□□□ -1.54
SRGAP3O43295 MIR195-201ENST00000385194 87 ntBASIC5.45□□□□□ -1.54
SRGAP3O43295 AL583835.1-201ENST00000399570 407 ntBASIC5.45□□□□□ -1.54
SRGAP3O43295 AC097374.1-203ENST00000400783 485 ntBASIC5.45□□□□□ -1.54
SRGAP3O43295 AL590290.1-201ENST00000405336 380 ntBASIC5.45□□□□□ -1.54
SRGAP3O43295 RNA5SP296-201ENST00000410523 111 ntBASIC5.45□□□□□ -1.54
SRGAP3O43295 RNU6-272P-201ENST00000411028 104 ntBASIC5.45□□□□□ -1.54
SRGAP3O43295 SPA17P1-201ENST00000416656 452 ntBASIC5.45□□□□□ -1.54
SRGAP3O43295 SDCBPP3-201ENST00000419629 891 ntBASIC5.45□□□□□ -1.54
SRGAP3O43295 AF228730.4-201ENST00000421457 183 ntBASIC5.45□□□□□ -1.54
SRGAP3O43295 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC5.45□□□□□ -1.54
SRGAP3O43295 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC5.45□□□□□ -1.54
SRGAP3O43295 AL158073.1-201ENST00000426848 1104 ntBASIC5.45□□□□□ -1.54
SRGAP3O43295 RPL23AP52-201ENST00000439311 478 ntBASIC5.45□□□□□ -1.54
SRGAP3O43295 AC079448.1-201ENST00000449377 373 ntBASIC5.45□□□□□ -1.54
SRGAP3O43295 KCTD9P5-201ENST00000504141 1170 ntBASIC5.45□□□□□ -1.54
SRGAP3O43295 POU5F1P7-201ENST00000508759 541 ntBASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms