Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.8□□□□□ -1.8
SMAD9O15198 AC111000.2-201ENST00000507775 550 ntBASIC3.8□□□□□ -1.8
SMAD9O15198 PARP4P3-201ENST00000510265 317 ntBASIC3.8□□□□□ -1.8
SMAD9O15198 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC3.8□□□□□ -1.8
SMAD9O15198 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SMAD9O15198 RNU6-27P-201ENST00000516146 107 ntBASIC3.8□□□□□ -1.8
SMAD9O15198 SNORA31.9-201ENST00000516429 84 ntBASIC3.8□□□□□ -1.8
SMAD9O15198 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC3.8□□□□□ -1.8
SMAD9O15198 AC008802.1-201ENST00000519121 791 ntBASIC3.8□□□□□ -1.8
SMAD9O15198 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.8□□□□□ -1.8
SMAD9O15198 OR4P1P-201ENST00000530808 1136 ntBASIC3.8□□□□□ -1.8
SMAD9O15198 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.8□□□□□ -1.8
SMAD9O15198 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.8□□□□□ -1.8
SMAD9O15198 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.8□□□□□ -1.8
SMAD9O15198 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.8□□□□□ -1.8
SMAD9O15198 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.8□□□□□ -1.8
SMAD9O15198 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.8□□□□□ -1.8
SMAD9O15198 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.8□□□□□ -1.8
SMAD9O15198 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.8□□□□□ -1.8
SMAD9O15198 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.8□□□□□ -1.8
SMAD9O15198 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.8□□□□□ -1.8
SMAD9O15198 AL161729.3-201ENST00000603533 673 ntBASIC3.8□□□□□ -1.8
SMAD9O15198 AL139395.1-201ENST00000603662 160 ntBASIC3.8□□□□□ -1.8
SMAD9O15198 AC072039.2-201ENST00000608883 439 ntBASIC3.8□□□□□ -1.8
SMAD9O15198 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.8□□□□□ -1.8
SMAD9O15198 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
SMAD9O15198 AF246928.1-201ENST00000623768 87 ntBASIC3.8□□□□□ -1.8
SMAD9O15198 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SMAD9O15198 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.8□□□□□ -1.8
SMAD9O15198 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SMAD9O15198 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.8□□□□□ -1.8
SMAD9O15198 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
SMAD9O15198 AC097714.1-201ENST00000511272 1647 ntBASIC3.8□□□□□ -1.8
SMAD9O15198 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SMAD9O15198 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SMAD9O15198 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.8□□□□□ -1.8
SMAD9O15198 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
SMAD9O15198 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
SMAD9O15198 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.79□□□□□ -1.8
SMAD9O15198 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SMAD9O15198 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
SMAD9O15198 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SMAD9O15198 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SMAD9O15198 RNU1-15P-201ENST00000353977 144 ntBASIC3.79□□□□□ -1.8
SMAD9O15198 RNU6-553P-201ENST00000364047 96 ntBASIC3.79□□□□□ -1.8
SMAD9O15198 RNU6-289P-201ENST00000364093 107 ntBASIC3.79□□□□□ -1.8
SMAD9O15198 Y_RNA.560-201ENST00000384689 102 ntBASIC3.79□□□□□ -1.8
SMAD9O15198 RNU6-821P-201ENST00000390995 107 ntBASIC3.79□□□□□ -1.8
SMAD9O15198 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.79□□□□□ -1.8
SMAD9O15198 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.79□□□□□ -1.8
SMAD9O15198 AL161631.1-201ENST00000417933 486 ntBASIC3.79□□□□□ -1.8
SMAD9O15198 AC244098.2-201ENST00000422068 99 ntBASIC3.79□□□□□ -1.8
SMAD9O15198 PRELID3BP10-201ENST00000431957 584 ntBASIC3.79□□□□□ -1.8
SMAD9O15198 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SMAD9O15198 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC3.79□□□□□ -1.8
SMAD9O15198 AL445567.1-201ENST00000439121 144 ntBASIC3.79□□□□□ -1.8
SMAD9O15198 MTND5P14-201ENST00000441481 1267 ntBASIC3.79□□□□□ -1.8
SMAD9O15198 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.79□□□□□ -1.8
SMAD9O15198 RPL31P50-201ENST00000471002 296 ntBASIC3.79□□□□□ -1.8
SMAD9O15198 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
SMAD9O15198 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.79□□□□□ -1.8
SMAD9O15198 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SMAD9O15198 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.79□□□□□ -1.8
SMAD9O15198 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.79□□□□□ -1.8
SMAD9O15198 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.79□□□□□ -1.8
SMAD9O15198 AC093824.1-201ENST00000508796 343 ntBASIC3.79□□□□□ -1.8
SMAD9O15198 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.79□□□□□ -1.8
SMAD9O15198 AC010486.3-201ENST00000511602 785 ntBASIC3.79□□□□□ -1.8
SMAD9O15198 KCTD9P2-201ENST00000512203 1013 ntBASIC3.79□□□□□ -1.8
SMAD9O15198 MTCO1P35-201ENST00000515270 228 ntBASIC3.79□□□□□ -1.8
SMAD9O15198 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.79□□□□□ -1.8
SMAD9O15198 AC087373.1-201ENST00000524920 491 ntBASIC3.79□□□□□ -1.8
SMAD9O15198 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.79□□□□□ -1.8
SMAD9O15198 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SMAD9O15198 AC007224.1-201ENST00000564410 144 ntBASIC3.79□□□□□ -1.8
SMAD9O15198 MIR3160-1-201ENST00000577972 85 ntBASIC3.79□□□□□ -1.8
SMAD9O15198 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.79□□□□□ -1.8
SMAD9O15198 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.79□□□□□ -1.8
SMAD9O15198 Z99497.2-201ENST00000603634 310 ntBASIC3.79□□□□□ -1.8
SMAD9O15198 AL031666.3-201ENST00000609320 1006 ntBASIC3.79□□□□□ -1.8
SMAD9O15198 AC004908.3-201ENST00000610248 625 ntBASIC3.79□□□□□ -1.8
SMAD9O15198 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.79□□□□□ -1.8
SMAD9O15198 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.79□□□□□ -1.8
SMAD9O15198 AL445567.2-201ENST00000618935 498 ntBASIC3.79□□□□□ -1.8
SMAD9O15198 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SMAD9O15198 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.79□□□□□ -1.8
SMAD9O15198 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.79□□□□□ -1.8
SMAD9O15198 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
SMAD9O15198 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SMAD9O15198 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
SMAD9O15198 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.79□□□□□ -1.8
SMAD9O15198 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.79□□□□□ -1.8
SMAD9O15198 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SMAD9O15198 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SMAD9O15198 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.79□□□□□ -1.8
SMAD9O15198 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.78□□□□□ -1.8
SMAD9O15198 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.78□□□□□ -1.8
SMAD9O15198 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SMAD9O15198 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SMAD9O15198 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms