Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC2.54□□□□□ -2
CACNA1AO00555 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC2.54□□□□□ -2
CACNA1AO00555 WISP1-OT1-201ENST00000602893 642 ntBASIC2.54□□□□□ -2
CACNA1AO00555 AC019080.5-201ENST00000624891 757 ntBASIC2.54□□□□□ -2
CACNA1AO00555 AL445437.1-201ENST00000623157 3087 ntBASIC2.54□□□□□ -2
CACNA1AO00555 AC012020.1-201ENST00000624541 1728 ntBASIC2.54□□□□□ -2
CACNA1AO00555 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.54□□□□□ -2
CACNA1AO00555 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.54□□□□□ -2
CACNA1AO00555 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CACNA1AO00555 AL138878.1-201ENST00000405131 347 ntBASIC2.53□□□□□ -2
CACNA1AO00555 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.53□□□□□ -2
CACNA1AO00555 AC108078.3-201ENST00000502633 489 ntBASIC2.53□□□□□ -2
CACNA1AO00555 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC2.53□□□□□ -2
CACNA1AO00555 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC2.53□□□□□ -2
CACNA1AO00555 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.53□□□□□ -2
CACNA1AO00555 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.53□□□□□ -2
CACNA1AO00555 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC2.53□□□□□ -2
CACNA1AO00555 METTL8-219ENST00000640734 726 ntTSL 2 BASIC2.53□□□□□ -2
CACNA1AO00555 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.53□□□□□ -2
CACNA1AO00555 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC2.53□□□□□ -2
CACNA1AO00555 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
CACNA1AO00555 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CACNA1AO00555 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CACNA1AO00555 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
CACNA1AO00555 RNA5SP270-201ENST00000411361 118 ntBASIC2.53□□□□□ -2
CACNA1AO00555 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC2.53□□□□□ -2
CACNA1AO00555 RN7SL442P-201ENST00000473804 320 ntBASIC2.53□□□□□ -2
CACNA1AO00555 AC069499.1-201ENST00000489433 509 ntBASIC2.53□□□□□ -2
CACNA1AO00555 RNA5SP320-201ENST00000516263 124 ntBASIC2.53□□□□□ -2
CACNA1AO00555 HSPE1P18-201ENST00000517602 280 ntBASIC2.53□□□□□ -2
CACNA1AO00555 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.53□□□□□ -2
CACNA1AO00555 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC2.53□□□□□ -2
CACNA1AO00555 AL391646.1-201ENST00000603860 190 ntBASIC2.53□□□□□ -2
CACNA1AO00555 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CACNA1AO00555 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
CACNA1AO00555 AC245291.1-201ENST00000419501 328 ntBASIC2.52□□□□□ -2.01
CACNA1AO00555 Z99127.2-201ENST00000441426 334 ntBASIC2.52□□□□□ -2.01
CACNA1AO00555 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.52□□□□□ -2.01
CACNA1AO00555 AL137159.1-201ENST00000452808 512 ntBASIC2.52□□□□□ -2.01
CACNA1AO00555 AP003102.1-201ENST00000525638 661 ntBASIC2.52□□□□□ -2.01
CACNA1AO00555 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.52□□□□□ -2.01
CACNA1AO00555 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CACNA1AO00555 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CACNA1AO00555 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
CACNA1AO00555 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC2.52□□□□□ -2.01
CACNA1AO00555 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CACNA1AO00555 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.52□□□□□ -2.01
CACNA1AO00555 RPS20P5-201ENST00000434808 360 ntBASIC2.52□□□□□ -2.01
CACNA1AO00555 NDUFB4P6-201ENST00000436819 366 ntBASIC2.52□□□□□ -2.01
CACNA1AO00555 AC004801.2-202ENST00000463559 283 ntBASIC2.52□□□□□ -2.01
CACNA1AO00555 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC2.52□□□□□ -2.01
CACNA1AO00555 LRRC37A5P-203ENST00000580181 585 ntBASIC2.52□□□□□ -2.01
CACNA1AO00555 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC2.52□□□□□ -2.01
CACNA1AO00555 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
CACNA1AO00555 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
CACNA1AO00555 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.52□□□□□ -2.01
CACNA1AO00555 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
CACNA1AO00555 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CACNA1AO00555 MIR26A1-201ENST00000362205 77 ntBASIC2.51□□□□□ -2.01
CACNA1AO00555 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.51□□□□□ -2.01
CACNA1AO00555 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.51□□□□□ -2.01
CACNA1AO00555 AC006539.3-201ENST00000454258 129 ntBASIC2.51□□□□□ -2.01
CACNA1AO00555 NIPA2P2-201ENST00000496376 1083 ntBASIC2.51□□□□□ -2.01
CACNA1AO00555 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CACNA1AO00555 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.51□□□□□ -2.01
CACNA1AO00555 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CACNA1AO00555 OR4R2P-201ENST00000530815 597 ntBASIC2.51□□□□□ -2.01
CACNA1AO00555 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC2.51□□□□□ -2.01
CACNA1AO00555 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CACNA1AO00555 AC004972.1-201ENST00000623934 2209 ntBASIC2.51□□□□□ -2.01
CACNA1AO00555 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
CACNA1AO00555 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CACNA1AO00555 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CACNA1AO00555 AL512646.1-201ENST00000269395 1077 ntBASIC2.51□□□□□ -2.01
CACNA1AO00555 SNORA31-201ENST00000362607 130 ntBASIC2.51□□□□□ -2.01
CACNA1AO00555 AC244033.1-201ENST00000426826 870 ntBASIC2.51□□□□□ -2.01
CACNA1AO00555 RPL23AP76-201ENST00000441860 458 ntBASIC2.51□□□□□ -2.01
CACNA1AO00555 SEPT14P1-201ENST00000458703 648 ntBASIC2.51□□□□□ -2.01
CACNA1AO00555 RN7SKP24-201ENST00000515888 284 ntBASIC2.51□□□□□ -2.01
CACNA1AO00555 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC2.51□□□□□ -2.01
CACNA1AO00555 AC131238.1-201ENST00000617135 328 ntBASIC2.51□□□□□ -2.01
CACNA1AO00555 AC138965.3-201ENST00000623875 498 ntBASIC2.51□□□□□ -2.01
CACNA1AO00555 AC107081.3-201ENST00000612715 2034 ntBASIC2.51□□□□□ -2.01
CACNA1AO00555 AC011978.2-201ENST00000569835 2054 ntBASIC2.51□□□□□ -2.01
CACNA1AO00555 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.51□□□□□ -2.01
CACNA1AO00555 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CACNA1AO00555 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CACNA1AO00555 AC007342.9-201ENST00000623877 1385 ntBASIC2.51□□□□□ -2.01
CACNA1AO00555 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
CACNA1AO00555 AC240504.1-201ENST00000395709 845 ntBASIC2.5□□□□□ -2.01
CACNA1AO00555 BTF3P7-201ENST00000407097 488 ntBASIC2.5□□□□□ -2.01
CACNA1AO00555 AC069218.2-201ENST00000411665 344 ntBASIC2.5□□□□□ -2.01
CACNA1AO00555 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.5□□□□□ -2.01
CACNA1AO00555 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CACNA1AO00555 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CACNA1AO00555 AC021087.2-201ENST00000504656 1203 ntBASIC2.5□□□□□ -2.01
CACNA1AO00555 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC2.5□□□□□ -2.01
CACNA1AO00555 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC2.5□□□□□ -2.01
CACNA1AO00555 ZNF861P-201ENST00000588126 639 ntBASIC2.5□□□□□ -2.01
CACNA1AO00555 AC011712.1-201ENST00000588959 234 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms