Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.82□□□□□ -1.96
UPK1AO00322 OR5T3-201ENST00000303059 1023 ntBASIC2.82□□□□□ -1.96
UPK1AO00322 ENSAP3-201ENST00000312710 333 ntBASIC2.82□□□□□ -1.96
UPK1AO00322 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.82□□□□□ -1.96
UPK1AO00322 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
UPK1AO00322 RNU6-543P-201ENST00000362576 108 ntBASIC2.82□□□□□ -1.96
UPK1AO00322 RNA5SP27-201ENST00000363839 119 ntBASIC2.82□□□□□ -1.96
UPK1AO00322 MIR607-201ENST00000385241 96 ntBASIC2.82□□□□□ -1.96
UPK1AO00322 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
UPK1AO00322 AP000567.1-201ENST00000406413 156 ntBASIC2.82□□□□□ -1.96
UPK1AO00322 RN7SKP220-201ENST00000410611 288 ntBASIC2.82□□□□□ -1.96
UPK1AO00322 RPL7P8-201ENST00000411964 730 ntBASIC2.82□□□□□ -1.96
UPK1AO00322 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC2.82□□□□□ -1.96
UPK1AO00322 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
UPK1AO00322 PNRC2P1-201ENST00000423940 420 ntBASIC2.82□□□□□ -1.96
UPK1AO00322 AL513175.1-201ENST00000431492 780 ntBASIC2.82□□□□□ -1.96
UPK1AO00322 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
UPK1AO00322 YWHAZP8-201ENST00000436935 731 ntBASIC2.82□□□□□ -1.96
UPK1AO00322 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.82□□□□□ -1.96
UPK1AO00322 AL035407.2-201ENST00000454090 378 ntBASIC2.82□□□□□ -1.96
UPK1AO00322 AC008280.2-201ENST00000455473 307 ntBASIC2.82□□□□□ -1.96
UPK1AO00322 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC2.82□□□□□ -1.96
UPK1AO00322 AC006483.1-201ENST00000487308 313 ntBASIC2.82□□□□□ -1.96
UPK1AO00322 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC2.82□□□□□ -1.96
UPK1AO00322 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC2.82□□□□□ -1.96
UPK1AO00322 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC2.82□□□□□ -1.96
UPK1AO00322 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC2.82□□□□□ -1.96
UPK1AO00322 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC2.82□□□□□ -1.96
UPK1AO00322 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.82□□□□□ -1.96
UPK1AO00322 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC2.82□□□□□ -1.96
UPK1AO00322 AC004832.5-201ENST00000608677 401 ntBASIC2.82□□□□□ -1.96
UPK1AO00322 AL159169.3-201ENST00000608871 561 ntBASIC2.82□□□□□ -1.96
UPK1AO00322 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.82□□□□□ -1.96
UPK1AO00322 AC005156.1-201ENST00000613371 573 ntBASIC2.82□□□□□ -1.96
UPK1AO00322 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC2.82□□□□□ -1.96
UPK1AO00322 FRG1DP-201ENST00000635586 771 ntBASIC2.82□□□□□ -1.96
UPK1AO00322 LRRC77P-213ENST00000637727 880 ntBASIC2.82□□□□□ -1.96
UPK1AO00322 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.82□□□□□ -1.96
UPK1AO00322 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC2.82□□□□□ -1.96
UPK1AO00322 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.82□□□□□ -1.96
UPK1AO00322 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
UPK1AO00322 MTND5P28-201ENST00000438005 1594 ntBASIC2.82□□□□□ -1.96
UPK1AO00322 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
UPK1AO00322 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.82□□□□□ -1.96
UPK1AO00322 MTND5P7-201ENST00000413558 1798 ntBASIC2.82□□□□□ -1.96
UPK1AO00322 MTND5P11-201ENST00000511037 1812 ntBASIC2.82□□□□□ -1.96
UPK1AO00322 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC2.82□□□□□ -1.96
UPK1AO00322 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
UPK1AO00322 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.81□□□□□ -1.96
UPK1AO00322 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.81□□□□□ -1.96
UPK1AO00322 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
UPK1AO00322 RNU6-600P-201ENST00000362524 99 ntBASIC2.81□□□□□ -1.96
UPK1AO00322 RNU6-1339P-201ENST00000363574 91 ntBASIC2.81□□□□□ -1.96
UPK1AO00322 RNU6-1243P-201ENST00000364028 107 ntBASIC2.81□□□□□ -1.96
UPK1AO00322 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
UPK1AO00322 AC073264.1-201ENST00000411508 416 ntBASIC2.81□□□□□ -1.96
UPK1AO00322 HMGB3P31-201ENST00000413333 595 ntBASIC2.81□□□□□ -1.96
UPK1AO00322 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC2.81□□□□□ -1.96
UPK1AO00322 AC005517.2-201ENST00000424673 553 ntBASIC2.81□□□□□ -1.96
UPK1AO00322 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC2.81□□□□□ -1.96
UPK1AO00322 AL691517.1-201ENST00000440833 1235 ntBASIC2.81□□□□□ -1.96
UPK1AO00322 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC2.81□□□□□ -1.96
UPK1AO00322 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC2.81□□□□□ -1.96
UPK1AO00322 AC093392.2-201ENST00000450682 337 ntBASIC2.81□□□□□ -1.96
UPK1AO00322 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.81□□□□□ -1.96
UPK1AO00322 RPL31P13-201ENST00000484151 370 ntBASIC2.81□□□□□ -1.96
UPK1AO00322 RPL9P33-201ENST00000484311 566 ntBASIC2.81□□□□□ -1.96
UPK1AO00322 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC2.81□□□□□ -1.96
UPK1AO00322 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.81□□□□□ -1.96
UPK1AO00322 DYNLL1P6-201ENST00000503440 264 ntBASIC2.81□□□□□ -1.96
UPK1AO00322 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
UPK1AO00322 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC2.81□□□□□ -1.96
UPK1AO00322 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.81□□□□□ -1.96
UPK1AO00322 AC016065.2-201ENST00000514530 444 ntBASIC2.81□□□□□ -1.96
UPK1AO00322 AC008885.1-201ENST00000514930 301 ntBASIC2.81□□□□□ -1.96
UPK1AO00322 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC2.81□□□□□ -1.96
UPK1AO00322 AP000857.1-201ENST00000532151 543 ntBASIC2.81□□□□□ -1.96
UPK1AO00322 AL163153.1-201ENST00000554223 283 ntBASIC2.81□□□□□ -1.96
UPK1AO00322 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC2.81□□□□□ -1.96
UPK1AO00322 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC2.81□□□□□ -1.96
UPK1AO00322 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC2.81□□□□□ -1.96
UPK1AO00322 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC2.81□□□□□ -1.96
UPK1AO00322 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC2.81□□□□□ -1.96
UPK1AO00322 MIR3944-201ENST00000581277 108 ntBASIC2.81□□□□□ -1.96
UPK1AO00322 SNRPGP15-201ENST00000600149 222 ntBASIC2.81□□□□□ -1.96
UPK1AO00322 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC2.81□□□□□ -1.96
UPK1AO00322 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC2.81□□□□□ -1.96
UPK1AO00322 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC2.81□□□□□ -1.96
UPK1AO00322 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC2.81□□□□□ -1.96
UPK1AO00322 AC139713.2-210ENST00000641741 992 ntBASIC2.81□□□□□ -1.96
UPK1AO00322 AL355578.1-201ENST00000607405 1328 ntBASIC2.81□□□□□ -1.96
UPK1AO00322 MTND4P8-201ENST00000514997 1362 ntBASIC2.81□□□□□ -1.96
UPK1AO00322 PABPC1P7-201ENST00000413177 1513 ntBASIC2.81□□□□□ -1.96
UPK1AO00322 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
UPK1AO00322 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
UPK1AO00322 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.8□□□□□ -1.96
UPK1AO00322 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.8□□□□□ -1.96
UPK1AO00322 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
UPK1AO00322 RNA5SP295-201ENST00000362655 121 ntBASIC2.8□□□□□ -1.96
UPK1AO00322 RNA5SP374-201ENST00000362939 125 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms