Protein–RNA interactions for Protein: O00287

RFXAP, Regulatory factor X-associated protein, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAPO00287 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
RFXAPO00287 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.58
RFXAPO00287 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.58
RFXAPO00287 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
RFXAPO00287 AP001284.1-201ENST00000528393 2118 ntBASIC5.15□□□□□ -1.58
RFXAPO00287 AC083899.1-201ENST00000454465 3819 ntBASIC5.15□□□□□ -1.58
RFXAPO00287 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
RFXAPO00287 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
RFXAPO00287 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.15□□□□□ -1.58
RFXAPO00287 MTND4P1-201ENST00000457501 1466 ntBASIC5.15□□□□□ -1.58
RFXAPO00287 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
RFXAPO00287 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
RFXAPO00287 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
RFXAPO00287 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.15□□□□□ -1.58
RFXAPO00287 RNU6-289P-201ENST00000364093 107 ntBASIC5.15□□□□□ -1.59
RFXAPO00287 Y_RNA.384-201ENST00000383909 102 ntBASIC5.15□□□□□ -1.59
RFXAPO00287 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
RFXAPO00287 RPS20P2-201ENST00000402520 389 ntBASIC5.15□□□□□ -1.59
RFXAPO00287 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC5.15□□□□□ -1.59
RFXAPO00287 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
RFXAPO00287 MRPL50P2-201ENST00000416821 482 ntBASIC5.15□□□□□ -1.59
RFXAPO00287 MTATP6P18-201ENST00000417994 673 ntBASIC5.15□□□□□ -1.59
RFXAPO00287 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC5.15□□□□□ -1.59
RFXAPO00287 SETP9-201ENST00000423837 832 ntBASIC5.15□□□□□ -1.59
RFXAPO00287 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.15□□□□□ -1.59
RFXAPO00287 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC5.15□□□□□ -1.59
RFXAPO00287 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC5.15□□□□□ -1.59
RFXAPO00287 SKP1P1-201ENST00000438081 489 ntBASIC5.15□□□□□ -1.59
RFXAPO00287 GTF2IP13-201ENST00000438487 386 ntBASIC5.15□□□□□ -1.59
RFXAPO00287 MTND6P18-201ENST00000439477 513 ntBASIC5.15□□□□□ -1.59
RFXAPO00287 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC5.15□□□□□ -1.59
RFXAPO00287 MTND5P22-201ENST00000458380 195 ntBASIC5.15□□□□□ -1.59
RFXAPO00287 MRPS17P3-201ENST00000465453 385 ntBASIC5.15□□□□□ -1.59
RFXAPO00287 AC023194.1-201ENST00000493084 308 ntBASIC5.15□□□□□ -1.59
RFXAPO00287 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC5.15□□□□□ -1.59
RFXAPO00287 RNU4-49P-201ENST00000516080 140 ntBASIC5.15□□□□□ -1.59
RFXAPO00287 RNA5SP216-201ENST00000516111 123 ntBASIC5.15□□□□□ -1.59
RFXAPO00287 RNU6-794P-201ENST00000517261 64 ntBASIC5.15□□□□□ -1.59
RFXAPO00287 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC5.15□□□□□ -1.59
RFXAPO00287 AC068587.4-201ENST00000533893 186 ntBASIC5.15□□□□□ -1.59
RFXAPO00287 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC5.15□□□□□ -1.59
RFXAPO00287 FRG2DP-202ENST00000566967 323 ntBASIC5.15□□□□□ -1.59
RFXAPO00287 AC005668.1-201ENST00000571142 476 ntBASIC5.15□□□□□ -1.59
RFXAPO00287 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.15□□□□□ -1.59
RFXAPO00287 7SK.7-201ENST00000603504 247 ntBASIC5.15□□□□□ -1.59
RFXAPO00287 AC115621.1-201ENST00000604653 858 ntBASIC5.15□□□□□ -1.59
RFXAPO00287 AC245389.1-201ENST00000605141 529 ntBASIC5.15□□□□□ -1.59
RFXAPO00287 AC015712.7-201ENST00000615211 635 ntBASIC5.15□□□□□ -1.59
RFXAPO00287 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC5.15□□□□□ -1.59
RFXAPO00287 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
RFXAPO00287 AC009951.1-201ENST00000623674 2614 ntBASIC5.15□□□□□ -1.59
RFXAPO00287 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.15□□□□□ -1.59
RFXAPO00287 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC5.15□□□□□ -1.59
RFXAPO00287 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.15□□□□□ -1.59
RFXAPO00287 AC025031.4-201ENST00000621248 3271 ntBASIC5.15□□□□□ -1.59
RFXAPO00287 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
RFXAPO00287 LARP1BP1-201ENST00000506036 1359 ntBASIC5.15□□□□□ -1.59
RFXAPO00287 MTND4P35-201ENST00000604257 1375 ntBASIC5.15□□□□□ -1.59
RFXAPO00287 TCP11X1-202ENST00000622971 1372 ntBASIC5.15□□□□□ -1.59
RFXAPO00287 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC5.15□□□□□ -1.59
RFXAPO00287 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.15□□□□□ -1.59
RFXAPO00287 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RFXAPO00287 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RFXAPO00287 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.14□□□□□ -1.59
RFXAPO00287 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.14□□□□□ -1.59
RFXAPO00287 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RFXAPO00287 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.14□□□□□ -1.59
RFXAPO00287 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.14□□□□□ -1.59
RFXAPO00287 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RFXAPO00287 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.14□□□□□ -1.59
RFXAPO00287 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RFXAPO00287 RPL7P26-201ENST00000333817 754 ntBASIC5.14□□□□□ -1.59
RFXAPO00287 RNU6-223P-201ENST00000362830 107 ntBASIC5.14□□□□□ -1.59
RFXAPO00287 RNU6-657P-201ENST00000383904 107 ntBASIC5.14□□□□□ -1.59
RFXAPO00287 Y_RNA.387-201ENST00000383918 102 ntBASIC5.14□□□□□ -1.59
RFXAPO00287 Y_RNA.445-201ENST00000384168 102 ntBASIC5.14□□□□□ -1.59
RFXAPO00287 SNORA70C-201ENST00000384538 135 ntBASIC5.14□□□□□ -1.59
RFXAPO00287 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
RFXAPO00287 RNU6-1304P-201ENST00000411374 106 ntBASIC5.14□□□□□ -1.59
RFXAPO00287 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC5.14□□□□□ -1.59
RFXAPO00287 OR51AB1P-201ENST00000429046 620 ntBASIC5.14□□□□□ -1.59
RFXAPO00287 IFNA20P-201ENST00000436840 528 ntBASIC5.14□□□□□ -1.59
RFXAPO00287 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC5.14□□□□□ -1.59
RFXAPO00287 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.14□□□□□ -1.59
RFXAPO00287 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.14□□□□□ -1.59
RFXAPO00287 RPL23AP24-201ENST00000458203 385 ntBASIC5.14□□□□□ -1.59
RFXAPO00287 ABCC13-202ENST00000463099 3842 ntBASIC5.14□□□□□ -1.59
RFXAPO00287 AC015724.1-201ENST00000478577 156 ntBASIC5.14□□□□□ -1.59
RFXAPO00287 AC012123.2-201ENST00000485809 248 ntBASIC5.14□□□□□ -1.59
RFXAPO00287 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.14□□□□□ -1.59
RFXAPO00287 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC5.14□□□□□ -1.59
RFXAPO00287 AC091868.1-201ENST00000508746 304 ntBASIC5.14□□□□□ -1.59
RFXAPO00287 PCBP2P3-201ENST00000509726 843 ntBASIC5.14□□□□□ -1.59
RFXAPO00287 AC006499.2-201ENST00000513470 337 ntBASIC5.14□□□□□ -1.59
RFXAPO00287 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC5.14□□□□□ -1.59
RFXAPO00287 RNU6-1170P-201ENST00000515974 106 ntBASIC5.14□□□□□ -1.59
RFXAPO00287 SNORA40.12-201ENST00000516329 111 ntBASIC5.14□□□□□ -1.59
RFXAPO00287 RNU6-1137P-201ENST00000517073 99 ntBASIC5.14□□□□□ -1.59
RFXAPO00287 IGLVIV-65-201ENST00000517313 360 ntBASIC5.14□□□□□ -1.59
RFXAPO00287 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 130.7 ms