Protein–RNA interactions for Protein: O00257

CBX4, E3 SUMO-protein ligase CBX4, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4O00257 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CBX4O00257 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
CBX4O00257 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.94□□□□□ -1.62
CBX4O00257 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CBX4O00257 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC4.94□□□□□ -1.62
CBX4O00257 SNORA62-201ENST00000365493 153 ntBASIC4.94□□□□□ -1.62
CBX4O00257 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CBX4O00257 RPS4XP9-201ENST00000405151 780 ntBASIC4.94□□□□□ -1.62
CBX4O00257 CTSL3P-202ENST00000412179 788 ntBASIC4.94□□□□□ -1.62
CBX4O00257 AC127526.1-201ENST00000417526 366 ntBASIC4.94□□□□□ -1.62
CBX4O00257 AC104333.2-201ENST00000422630 192 ntBASIC4.94□□□□□ -1.62
CBX4O00257 AC009480.2-201ENST00000422916 432 ntBASIC4.94□□□□□ -1.62
CBX4O00257 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.94□□□□□ -1.62
CBX4O00257 VN1R34P-201ENST00000447387 883 ntBASIC4.94□□□□□ -1.62
CBX4O00257 TPT1P12-201ENST00000448968 492 ntBASIC4.94□□□□□ -1.62
CBX4O00257 IFNWP4-201ENST00000453148 294 ntBASIC4.94□□□□□ -1.62
CBX4O00257 MTND2P24-201ENST00000453434 806 ntBASIC4.94□□□□□ -1.62
CBX4O00257 AC104308.1-201ENST00000454621 333 ntBASIC4.94□□□□□ -1.62
CBX4O00257 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC4.94□□□□□ -1.62
CBX4O00257 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.94□□□□□ -1.62
CBX4O00257 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.94□□□□□ -1.62
CBX4O00257 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
CBX4O00257 RPL38P1-201ENST00000460914 211 ntBASIC4.94□□□□□ -1.62
CBX4O00257 RN7SL385P-201ENST00000468873 276 ntBASIC4.94□□□□□ -1.62
CBX4O00257 AC079382.1-201ENST00000493346 557 ntBASIC4.94□□□□□ -1.62
CBX4O00257 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.94□□□□□ -1.62
CBX4O00257 ARL4AP2-201ENST00000507378 601 ntBASIC4.94□□□□□ -1.62
CBX4O00257 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC4.94□□□□□ -1.62
CBX4O00257 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.94□□□□□ -1.62
CBX4O00257 HIGD1AP3-201ENST00000515857 278 ntBASIC4.94□□□□□ -1.62
CBX4O00257 AP003497.1-201ENST00000528472 562 ntBASIC4.94□□□□□ -1.62
CBX4O00257 AC109635.3-201ENST00000529536 185 ntBASIC4.94□□□□□ -1.62
CBX4O00257 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC4.94□□□□□ -1.62
CBX4O00257 AP003034.1-201ENST00000534621 422 ntBASIC4.94□□□□□ -1.62
CBX4O00257 AC133555.2-201ENST00000550213 292 ntBASIC4.94□□□□□ -1.62
CBX4O00257 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.94□□□□□ -1.62
CBX4O00257 AL157687.1-201ENST00000554853 619 ntBASIC4.94□□□□□ -1.62
CBX4O00257 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.94□□□□□ -1.62
CBX4O00257 AC091042.1-201ENST00000579213 173 ntBASIC4.94□□□□□ -1.62
CBX4O00257 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC4.94□□□□□ -1.62
CBX4O00257 AL512782.1-201ENST00000603093 364 ntBASIC4.94□□□□□ -1.62
CBX4O00257 AP000907.4-201ENST00000604143 237 ntBASIC4.94□□□□□ -1.62
CBX4O00257 AL451044.1-201ENST00000604867 238 ntBASIC4.94□□□□□ -1.62
CBX4O00257 AL121932.1-201ENST00000605542 214 ntBASIC4.94□□□□□ -1.62
CBX4O00257 AL357078.3-201ENST00000607528 618 ntBASIC4.94□□□□□ -1.62
CBX4O00257 AC006329.2-201ENST00000611491 394 ntBASIC4.94□□□□□ -1.62
CBX4O00257 MIR6780A-201ENST00000615089 68 ntBASIC4.94□□□□□ -1.62
CBX4O00257 AL590099.1-201ENST00000615276 138 ntBASIC4.94□□□□□ -1.62
CBX4O00257 AP006248.2-201ENST00000623309 592 ntBASIC4.94□□□□□ -1.62
CBX4O00257 AC091925.2-201ENST00000625059 256 ntBASIC4.94□□□□□ -1.62
CBX4O00257 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
CBX4O00257 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CBX4O00257 PCAT14-202ENST00000627127 3935 ntBASIC4.94□□□□□ -1.62
CBX4O00257 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.94□□□□□ -1.62
CBX4O00257 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CBX4O00257 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CBX4O00257 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
CBX4O00257 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CBX4O00257 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
CBX4O00257 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.93□□□□□ -1.62
CBX4O00257 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CBX4O00257 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CBX4O00257 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
CBX4O00257 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
CBX4O00257 RNU5E-4P-201ENST00000364931 120 ntBASIC4.93□□□□□ -1.62
CBX4O00257 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CBX4O00257 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
CBX4O00257 SNORA20.2-201ENST00000383922 131 ntBASIC4.93□□□□□ -1.62
CBX4O00257 SNORD51-201ENST00000384320 80 ntBASIC4.93□□□□□ -1.62
CBX4O00257 RNA5SP332-201ENST00000391063 115 ntBASIC4.93□□□□□ -1.62
CBX4O00257 U3.30-201ENST00000391308 210 ntBASIC4.93□□□□□ -1.62
CBX4O00257 FGFR1OP2P1-201ENST00000395943 500 ntBASIC4.93□□□□□ -1.62
CBX4O00257 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CBX4O00257 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.93□□□□□ -1.62
CBX4O00257 AC006548.1-201ENST00000427470 102 ntBASIC4.93□□□□□ -1.62
CBX4O00257 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC4.93□□□□□ -1.62
CBX4O00257 AC068287.1-201ENST00000430283 295 ntBASIC4.93□□□□□ -1.62
CBX4O00257 RPS17P8-201ENST00000434525 335 ntBASIC4.93□□□□□ -1.62
CBX4O00257 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
CBX4O00257 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CBX4O00257 NFU1P2-201ENST00000448700 469 ntBASIC4.93□□□□□ -1.62
CBX4O00257 AL353691.1-201ENST00000451332 387 ntBASIC4.93□□□□□ -1.62
CBX4O00257 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.93□□□□□ -1.62
CBX4O00257 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC4.93□□□□□ -1.62
CBX4O00257 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC4.93□□□□□ -1.62
CBX4O00257 AC055855.1-201ENST00000489563 579 ntBASIC4.93□□□□□ -1.62
CBX4O00257 AL139099.1-201ENST00000497398 403 ntBASIC4.93□□□□□ -1.62
CBX4O00257 RN7SL558P-201ENST00000497468 299 ntBASIC4.93□□□□□ -1.62
CBX4O00257 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.93□□□□□ -1.62
CBX4O00257 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.93□□□□□ -1.62
CBX4O00257 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.93□□□□□ -1.62
CBX4O00257 RPL23AP53-201ENST00000521854 457 ntBASIC4.93□□□□□ -1.62
CBX4O00257 AC107934.1-201ENST00000522215 217 ntBASIC4.93□□□□□ -1.62
CBX4O00257 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.93□□□□□ -1.62
CBX4O00257 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.93□□□□□ -1.62
CBX4O00257 AC005868.1-201ENST00000536421 331 ntBASIC4.93□□□□□ -1.62
CBX4O00257 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.93□□□□□ -1.62
CBX4O00257 AL512310.1-201ENST00000548639 172 ntBASIC4.93□□□□□ -1.62
CBX4O00257 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.93□□□□□ -1.62
CBX4O00257 AL512360.1-201ENST00000555346 234 ntBASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms