Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
PDLIM1O00151 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PDLIM1O00151 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
PDLIM1O00151 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PDLIM1O00151 U8.9-201ENST00000365667 134 ntBASIC3.42□□□□□ -1.86
PDLIM1O00151 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
PDLIM1O00151 RNU6-921P-201ENST00000384361 107 ntBASIC3.42□□□□□ -1.86
PDLIM1O00151 SOD2P1-201ENST00000396543 562 ntBASIC3.42□□□□□ -1.86
PDLIM1O00151 AL121972.1-201ENST00000402023 252 ntBASIC3.42□□□□□ -1.86
PDLIM1O00151 AL136133.1-201ENST00000413694 376 ntBASIC3.42□□□□□ -1.86
PDLIM1O00151 RPL31P2-201ENST00000413849 377 ntBASIC3.42□□□□□ -1.86
PDLIM1O00151 AC244098.2-201ENST00000422068 99 ntBASIC3.42□□□□□ -1.86
PDLIM1O00151 DPRXP1-201ENST00000426312 460 ntBASIC3.42□□□□□ -1.86
PDLIM1O00151 Z93242.1-201ENST00000427102 353 ntBASIC3.42□□□□□ -1.86
PDLIM1O00151 MTCO1P3-201ENST00000429327 192 ntBASIC3.42□□□□□ -1.86
PDLIM1O00151 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.42□□□□□ -1.86
PDLIM1O00151 RPS29P7-201ENST00000439662 171 ntBASIC3.42□□□□□ -1.86
PDLIM1O00151 RPL21P2-201ENST00000440049 481 ntBASIC3.42□□□□□ -1.86
PDLIM1O00151 MTCO1P53-201ENST00000441633 699 ntBASIC3.42□□□□□ -1.86
PDLIM1O00151 AC006480.1-201ENST00000449887 378 ntBASIC3.42□□□□□ -1.86
PDLIM1O00151 AC099563.1-201ENST00000456086 418 ntBASIC3.42□□□□□ -1.86
PDLIM1O00151 FTH1P2-201ENST00000466086 412 ntBASIC3.42□□□□□ -1.86
PDLIM1O00151 AC084357.1-201ENST00000473404 255 ntBASIC3.42□□□□□ -1.86
PDLIM1O00151 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.42□□□□□ -1.86
PDLIM1O00151 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.42□□□□□ -1.86
PDLIM1O00151 NPM1P41-201ENST00000512920 831 ntBASIC3.42□□□□□ -1.86
PDLIM1O00151 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.42□□□□□ -1.86
PDLIM1O00151 AC026402.1-201ENST00000513642 170 ntBASIC3.42□□□□□ -1.86
PDLIM1O00151 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC3.42□□□□□ -1.86
PDLIM1O00151 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.42□□□□□ -1.86
PDLIM1O00151 FABP5P12-201ENST00000515543 389 ntBASIC3.42□□□□□ -1.86
PDLIM1O00151 RNU6-352P-201ENST00000516908 107 ntBASIC3.42□□□□□ -1.86
PDLIM1O00151 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.42□□□□□ -1.86
PDLIM1O00151 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.42□□□□□ -1.86
PDLIM1O00151 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.42□□□□□ -1.86
PDLIM1O00151 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.42□□□□□ -1.86
PDLIM1O00151 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.42□□□□□ -1.86
PDLIM1O00151 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.42□□□□□ -1.86
PDLIM1O00151 CYCSP30-201ENST00000546447 172 ntBASIC3.42□□□□□ -1.86
PDLIM1O00151 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.42□□□□□ -1.86
PDLIM1O00151 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.42□□□□□ -1.86
PDLIM1O00151 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.42□□□□□ -1.86
PDLIM1O00151 HSPE1P5-201ENST00000561489 272 ntBASIC3.42□□□□□ -1.86
PDLIM1O00151 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.42□□□□□ -1.86
PDLIM1O00151 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
PDLIM1O00151 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.42□□□□□ -1.86
PDLIM1O00151 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.42□□□□□ -1.86
PDLIM1O00151 AC015726.1-201ENST00000602353 681 ntBASIC3.42□□□□□ -1.86
PDLIM1O00151 AL163642.2-201ENST00000604722 1019 ntBASIC3.42□□□□□ -1.86
PDLIM1O00151 AC144521.1-201ENST00000607148 956 ntBASIC3.42□□□□□ -1.86
PDLIM1O00151 AC090425.2-201ENST00000608818 501 ntBASIC3.42□□□□□ -1.86
PDLIM1O00151 AC009237.15-201ENST00000610252 501 ntBASIC3.42□□□□□ -1.86
PDLIM1O00151 PART1_2.1-201ENST00000612397 250 ntBASIC3.42□□□□□ -1.86
PDLIM1O00151 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PDLIM1O00151 AL357559.1-201ENST00000622228 274 ntBASIC3.42□□□□□ -1.86
PDLIM1O00151 AC112200.1-201ENST00000625015 234 ntBASIC3.42□□□□□ -1.86
PDLIM1O00151 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.42□□□□□ -1.86
PDLIM1O00151 AF001550.2-201ENST00000636643 217 ntBASIC3.42□□□□□ -1.86
PDLIM1O00151 AL732372.2-225ENST00000642124 456 ntBASIC3.42□□□□□ -1.86
PDLIM1O00151 PABPC1P7-201ENST00000413177 1513 ntBASIC3.42□□□□□ -1.86
PDLIM1O00151 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
PDLIM1O00151 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
PDLIM1O00151 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.42□□□□□ -1.86
PDLIM1O00151 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.42□□□□□ -1.86
PDLIM1O00151 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PDLIM1O00151 API5P2-201ENST00000397055 1498 ntBASIC3.41□□□□□ -1.86
PDLIM1O00151 Z99496.1-201ENST00000469424 1477 ntBASIC3.41□□□□□ -1.86
PDLIM1O00151 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
PDLIM1O00151 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
PDLIM1O00151 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
PDLIM1O00151 RNU6-600P-201ENST00000362524 99 ntBASIC3.41□□□□□ -1.86
PDLIM1O00151 RNU6-492P-201ENST00000363035 104 ntBASIC3.41□□□□□ -1.86
PDLIM1O00151 U3.11-201ENST00000364476 212 ntBASIC3.41□□□□□ -1.86
PDLIM1O00151 SNORA51.4-201ENST00000364993 124 ntBASIC3.41□□□□□ -1.86
PDLIM1O00151 MIR217-201ENST00000384817 110 ntBASIC3.41□□□□□ -1.86
PDLIM1O00151 RNA5SP424-201ENST00000390988 115 ntBASIC3.41□□□□□ -1.86
PDLIM1O00151 RNU6-1300P-201ENST00000391046 108 ntBASIC3.41□□□□□ -1.86
PDLIM1O00151 ZNF602P-201ENST00000405929 924 ntBASIC3.41□□□□□ -1.86
PDLIM1O00151 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.41□□□□□ -1.86
PDLIM1O00151 CRYBB2P1-203ENST00000415709 538 ntBASIC3.41□□□□□ -1.86
PDLIM1O00151 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.41□□□□□ -1.86
PDLIM1O00151 BOLA3P4-201ENST00000418151 400 ntBASIC3.41□□□□□ -1.86
PDLIM1O00151 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.41□□□□□ -1.86
PDLIM1O00151 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
PDLIM1O00151 AC005517.2-201ENST00000424673 553 ntBASIC3.41□□□□□ -1.86
PDLIM1O00151 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
PDLIM1O00151 RAC1P8-201ENST00000427086 527 ntBASIC3.41□□□□□ -1.86
PDLIM1O00151 AC005345.1-201ENST00000431868 217 ntBASIC3.41□□□□□ -1.86
PDLIM1O00151 SEPT7P5-201ENST00000434048 306 ntBASIC3.41□□□□□ -1.86
PDLIM1O00151 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.41□□□□□ -1.86
PDLIM1O00151 YWHAZP7-201ENST00000436906 631 ntBASIC3.41□□□□□ -1.86
PDLIM1O00151 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.41□□□□□ -1.86
PDLIM1O00151 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
PDLIM1O00151 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.41□□□□□ -1.86
PDLIM1O00151 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
PDLIM1O00151 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.41□□□□□ -1.86
PDLIM1O00151 HMGN1P18-201ENST00000457642 277 ntBASIC3.41□□□□□ -1.86
PDLIM1O00151 RPL5P24-201ENST00000463742 885 ntBASIC3.41□□□□□ -1.86
PDLIM1O00151 RPL21P104-201ENST00000464143 478 ntBASIC3.41□□□□□ -1.86
PDLIM1O00151 VPS26AP1-201ENST00000483197 979 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms