Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.84□□□□□ -1.79
DDX39AO00148 AL358832.1-201ENST00000497800 389 ntBASIC3.84□□□□□ -1.79
DDX39AO00148 BOLA3P3-201ENST00000505182 232 ntBASIC3.84□□□□□ -1.79
DDX39AO00148 AC004062.1-201ENST00000509926 645 ntBASIC3.84□□□□□ -1.79
DDX39AO00148 FCF1P8-201ENST00000510322 597 ntBASIC3.84□□□□□ -1.79
DDX39AO00148 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.84□□□□□ -1.79
DDX39AO00148 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.84□□□□□ -1.79
DDX39AO00148 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC3.84□□□□□ -1.79
DDX39AO00148 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.84□□□□□ -1.79
DDX39AO00148 MTCYBP27-201ENST00000555160 670 ntBASIC3.84□□□□□ -1.79
DDX39AO00148 XIAPP1-201ENST00000603162 600 ntBASIC3.84□□□□□ -1.79
DDX39AO00148 AL161756.2-201ENST00000604597 246 ntBASIC3.84□□□□□ -1.79
DDX39AO00148 HMGB1P50-201ENST00000605814 607 ntBASIC3.84□□□□□ -1.79
DDX39AO00148 AC022149.2-201ENST00000621061 203 ntBASIC3.84□□□□□ -1.79
DDX39AO00148 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.84□□□□□ -1.79
DDX39AO00148 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.84□□□□□ -1.79
DDX39AO00148 ZNF663P-202ENST00000641770 1131 ntBASIC3.84□□□□□ -1.79
DDX39AO00148 MTND5P1-201ENST00000445440 1375 ntBASIC3.84□□□□□ -1.79
DDX39AO00148 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
DDX39AO00148 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.84□□□□□ -1.8
DDX39AO00148 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
DDX39AO00148 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.8
DDX39AO00148 AC032011.1-201ENST00000611703 1549 ntBASIC3.84□□□□□ -1.8
DDX39AO00148 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.84□□□□□ -1.8
DDX39AO00148 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.84□□□□□ -1.8
DDX39AO00148 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.84□□□□□ -1.8
DDX39AO00148 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.84□□□□□ -1.8
DDX39AO00148 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
DDX39AO00148 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
DDX39AO00148 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
DDX39AO00148 MIR217-201ENST00000384817 110 ntBASIC3.83□□□□□ -1.8
DDX39AO00148 AL603865.2-201ENST00000401679 213 ntBASIC3.83□□□□□ -1.8
DDX39AO00148 AL136116.1-201ENST00000403591 381 ntBASIC3.83□□□□□ -1.8
DDX39AO00148 RSL24D1P1-201ENST00000404972 493 ntBASIC3.83□□□□□ -1.8
DDX39AO00148 RNA5SP129-201ENST00000410276 118 ntBASIC3.83□□□□□ -1.8
DDX39AO00148 AC092634.6-201ENST00000418558 192 ntBASIC3.83□□□□□ -1.8
DDX39AO00148 AL158156.1-201ENST00000422509 473 ntBASIC3.83□□□□□ -1.8
DDX39AO00148 AC013262.1-201ENST00000426710 252 ntBASIC3.83□□□□□ -1.8
DDX39AO00148 AC092393.1-201ENST00000439625 742 ntBASIC3.83□□□□□ -1.8
DDX39AO00148 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
DDX39AO00148 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.83□□□□□ -1.8
DDX39AO00148 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC3.83□□□□□ -1.8
DDX39AO00148 AC244505.3-201ENST00000454598 187 ntBASIC3.83□□□□□ -1.8
DDX39AO00148 NIPA2P2-201ENST00000496376 1083 ntBASIC3.83□□□□□ -1.8
DDX39AO00148 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.83□□□□□ -1.8
DDX39AO00148 DYNLL1P6-201ENST00000503440 264 ntBASIC3.83□□□□□ -1.8
DDX39AO00148 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.83□□□□□ -1.8
DDX39AO00148 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
DDX39AO00148 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.83□□□□□ -1.8
DDX39AO00148 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.83□□□□□ -1.8
DDX39AO00148 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.83□□□□□ -1.8
DDX39AO00148 AC008127.2-201ENST00000549925 1075 ntBASIC3.83□□□□□ -1.8
DDX39AO00148 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.83□□□□□ -1.8
DDX39AO00148 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.83□□□□□ -1.8
DDX39AO00148 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.83□□□□□ -1.8
DDX39AO00148 MIR4276-201ENST00000584832 70 ntBASIC3.83□□□□□ -1.8
DDX39AO00148 AC020914.4-201ENST00000597690 277 ntBASIC3.83□□□□□ -1.8
DDX39AO00148 AC092650.2-201ENST00000619984 902 ntBASIC3.83□□□□□ -1.8
DDX39AO00148 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.83□□□□□ -1.8
DDX39AO00148 AC006249.1-201ENST00000621223 471 ntBASIC3.83□□□□□ -1.8
DDX39AO00148 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
DDX39AO00148 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.83□□□□□ -1.8
DDX39AO00148 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.83□□□□□ -1.8
DDX39AO00148 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
DDX39AO00148 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
DDX39AO00148 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.83□□□□□ -1.8
DDX39AO00148 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
DDX39AO00148 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
DDX39AO00148 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.82□□□□□ -1.8
DDX39AO00148 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.82□□□□□ -1.8
DDX39AO00148 AC244517.1-201ENST00000606030 2086 ntBASIC3.82□□□□□ -1.8
DDX39AO00148 NUP58P1-201ENST00000502546 1738 ntBASIC3.82□□□□□ -1.8
DDX39AO00148 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
DDX39AO00148 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.82□□□□□ -1.8
DDX39AO00148 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
DDX39AO00148 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
DDX39AO00148 UBE2Q2P1-202ENST00000354771 883 ntBASIC3.82□□□□□ -1.8
DDX39AO00148 RNU6-50P-201ENST00000362356 103 ntBASIC3.82□□□□□ -1.8
DDX39AO00148 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
DDX39AO00148 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.82□□□□□ -1.8
DDX39AO00148 PTMAP5-201ENST00000393073 333 ntBASIC3.82□□□□□ -1.8
DDX39AO00148 AMD1P2-201ENST00000412936 992 ntBASIC3.82□□□□□ -1.8
DDX39AO00148 BOLA3P4-201ENST00000418151 400 ntBASIC3.82□□□□□ -1.8
DDX39AO00148 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.82□□□□□ -1.8
DDX39AO00148 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.82□□□□□ -1.8
DDX39AO00148 MTCO3P1-205ENST00000422088 832 ntBASIC3.82□□□□□ -1.8
DDX39AO00148 Z93242.1-201ENST00000427102 353 ntBASIC3.82□□□□□ -1.8
DDX39AO00148 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.82□□□□□ -1.8
DDX39AO00148 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
DDX39AO00148 MRPL42P4-201ENST00000453267 443 ntBASIC3.82□□□□□ -1.8
DDX39AO00148 MTCO3P16-201ENST00000454456 754 ntBASIC3.82□□□□□ -1.8
DDX39AO00148 snoU13.4-201ENST00000458916 104 ntBASIC3.82□□□□□ -1.8
DDX39AO00148 RN7SL601P-201ENST00000471221 293 ntBASIC3.82□□□□□ -1.8
DDX39AO00148 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.82□□□□□ -1.8
DDX39AO00148 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC3.82□□□□□ -1.8
DDX39AO00148 FCF1P3-201ENST00000496394 590 ntBASIC3.82□□□□□ -1.8
DDX39AO00148 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.82□□□□□ -1.8
DDX39AO00148 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
DDX39AO00148 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.82□□□□□ -1.8
DDX39AO00148 IGKV2-23-201ENST00000518729 323 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms