Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 RNA5SP124-201ENST00000362739 110 ntBASIC3.53□□□□□ -1.84
NPIPA3F8WFD2 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.53□□□□□ -1.84
NPIPA3F8WFD2 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
NPIPA3F8WFD2 RNU6-837P-201ENST00000391056 108 ntBASIC3.53□□□□□ -1.84
NPIPA3F8WFD2 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.53□□□□□ -1.84
NPIPA3F8WFD2 RAB9AP3-201ENST00000412737 573 ntBASIC3.53□□□□□ -1.84
NPIPA3F8WFD2 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.53□□□□□ -1.84
NPIPA3F8WFD2 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
NPIPA3F8WFD2 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
NPIPA3F8WFD2 GLRXP1-201ENST00000423261 334 ntBASIC3.53□□□□□ -1.84
NPIPA3F8WFD2 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.53□□□□□ -1.84
NPIPA3F8WFD2 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.53□□□□□ -1.84
NPIPA3F8WFD2 MTND3P1-201ENST00000441336 220 ntBASIC3.53□□□□□ -1.84
NPIPA3F8WFD2 RANP8-201ENST00000444720 713 ntBASIC3.53□□□□□ -1.84
NPIPA3F8WFD2 Z73417.1-201ENST00000447373 778 ntBASIC3.53□□□□□ -1.84
NPIPA3F8WFD2 AL358232.1-201ENST00000448030 501 ntBASIC3.53□□□□□ -1.84
NPIPA3F8WFD2 RAB9AP1-201ENST00000449393 573 ntBASIC3.53□□□□□ -1.84
NPIPA3F8WFD2 ZNF736P8Y-201ENST00000451913 669 ntBASIC3.53□□□□□ -1.84
NPIPA3F8WFD2 AC026410.2-201ENST00000460281 156 ntBASIC3.53□□□□□ -1.84
NPIPA3F8WFD2 TMEM251P1-201ENST00000503717 318 ntBASIC3.53□□□□□ -1.84
NPIPA3F8WFD2 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.53□□□□□ -1.84
NPIPA3F8WFD2 PAICSP4-201ENST00000517543 1253 ntBASIC3.53□□□□□ -1.84
NPIPA3F8WFD2 NDUFA5P2-201ENST00000519723 344 ntBASIC3.53□□□□□ -1.84
NPIPA3F8WFD2 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
NPIPA3F8WFD2 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.53□□□□□ -1.84
NPIPA3F8WFD2 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.53□□□□□ -1.84
NPIPA3F8WFD2 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.53□□□□□ -1.84
NPIPA3F8WFD2 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC3.53□□□□□ -1.84
NPIPA3F8WFD2 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.53□□□□□ -1.84
NPIPA3F8WFD2 AC006270.2-201ENST00000578523 652 ntBASIC3.53□□□□□ -1.84
NPIPA3F8WFD2 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.53□□□□□ -1.84
NPIPA3F8WFD2 AL139395.1-201ENST00000603662 160 ntBASIC3.53□□□□□ -1.84
NPIPA3F8WFD2 BNIP3P11-201ENST00000603878 563 ntBASIC3.53□□□□□ -1.84
NPIPA3F8WFD2 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
NPIPA3F8WFD2 AL158042.1-201ENST00000605338 460 ntBASIC3.53□□□□□ -1.84
NPIPA3F8WFD2 AC107952.2-201ENST00000606048 486 ntBASIC3.53□□□□□ -1.84
NPIPA3F8WFD2 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
NPIPA3F8WFD2 AC005344.1-201ENST00000613391 459 ntBASIC3.53□□□□□ -1.84
NPIPA3F8WFD2 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
NPIPA3F8WFD2 MIR6075-201ENST00000620782 95 ntBASIC3.53□□□□□ -1.84
NPIPA3F8WFD2 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
NPIPA3F8WFD2 AP002782.1-201ENST00000623107 614 ntBASIC3.53□□□□□ -1.84
NPIPA3F8WFD2 AC231657.1-201ENST00000624313 397 ntBASIC3.53□□□□□ -1.84
NPIPA3F8WFD2 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC3.53□□□□□ -1.84
NPIPA3F8WFD2 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.53□□□□□ -1.84
NPIPA3F8WFD2 AC012442.3-202ENST00000636742 206 ntBASIC3.53□□□□□ -1.84
NPIPA3F8WFD2 AC006927.4-201ENST00000639187 543 ntBASIC3.53□□□□□ -1.84
NPIPA3F8WFD2 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
NPIPA3F8WFD2 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
NPIPA3F8WFD2 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
NPIPA3F8WFD2 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.53□□□□□ -1.84
NPIPA3F8WFD2 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.53□□□□□ -1.84
NPIPA3F8WFD2 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
NPIPA3F8WFD2 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
NPIPA3F8WFD2 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
NPIPA3F8WFD2 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
NPIPA3F8WFD2 AP000776.1-201ENST00000530032 1663 ntBASIC3.52□□□□□ -1.85
NPIPA3F8WFD2 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.52□□□□□ -1.85
NPIPA3F8WFD2 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
NPIPA3F8WFD2 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
NPIPA3F8WFD2 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
NPIPA3F8WFD2 RNU6-1249P-201ENST00000363237 111 ntBASIC3.52□□□□□ -1.85
NPIPA3F8WFD2 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.52□□□□□ -1.85
NPIPA3F8WFD2 RNU6-83P-201ENST00000384568 112 ntBASIC3.52□□□□□ -1.85
NPIPA3F8WFD2 RNU6-821P-201ENST00000390995 107 ntBASIC3.52□□□□□ -1.85
NPIPA3F8WFD2 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.52□□□□□ -1.85
NPIPA3F8WFD2 RNA5SP306-201ENST00000411087 107 ntBASIC3.52□□□□□ -1.85
NPIPA3F8WFD2 AL008987.1-201ENST00000415528 237 ntBASIC3.52□□□□□ -1.85
NPIPA3F8WFD2 HMGB1P49-201ENST00000418882 569 ntBASIC3.52□□□□□ -1.85
NPIPA3F8WFD2 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.52□□□□□ -1.85
NPIPA3F8WFD2 AC069157.1-201ENST00000421749 137 ntBASIC3.52□□□□□ -1.85
NPIPA3F8WFD2 AC006548.1-201ENST00000427470 102 ntBASIC3.52□□□□□ -1.85
NPIPA3F8WFD2 PSMA6P3-201ENST00000428242 164 ntBASIC3.52□□□□□ -1.85
NPIPA3F8WFD2 NANOGP6-201ENST00000429190 847 ntBASIC3.52□□□□□ -1.85
NPIPA3F8WFD2 MRPS18BP2-201ENST00000434310 759 ntBASIC3.52□□□□□ -1.85
NPIPA3F8WFD2 RPL23AP74-201ENST00000437246 471 ntBASIC3.52□□□□□ -1.85
NPIPA3F8WFD2 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.52□□□□□ -1.85
NPIPA3F8WFD2 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.52□□□□□ -1.85
NPIPA3F8WFD2 USP9YP34-201ENST00000453983 808 ntBASIC3.52□□□□□ -1.85
NPIPA3F8WFD2 BTF3P5-201ENST00000457252 467 ntBASIC3.52□□□□□ -1.85
NPIPA3F8WFD2 RPL7P15-201ENST00000461190 712 ntBASIC3.52□□□□□ -1.85
NPIPA3F8WFD2 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.52□□□□□ -1.85
NPIPA3F8WFD2 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC3.52□□□□□ -1.85
NPIPA3F8WFD2 RPL31P61-201ENST00000496160 376 ntBASIC3.52□□□□□ -1.85
NPIPA3F8WFD2 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.52□□□□□ -1.85
NPIPA3F8WFD2 AC010587.2-201ENST00000511727 448 ntBASIC3.52□□□□□ -1.85
NPIPA3F8WFD2 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC3.52□□□□□ -1.85
NPIPA3F8WFD2 HNRNPKP5-201ENST00000515300 253 ntBASIC3.52□□□□□ -1.85
NPIPA3F8WFD2 RNU6-27P-201ENST00000516146 107 ntBASIC3.52□□□□□ -1.85
NPIPA3F8WFD2 AC008802.1-201ENST00000519121 791 ntBASIC3.52□□□□□ -1.85
NPIPA3F8WFD2 OR5AK1P-201ENST00000524837 922 ntBASIC3.52□□□□□ -1.85
NPIPA3F8WFD2 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
NPIPA3F8WFD2 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC3.52□□□□□ -1.85
NPIPA3F8WFD2 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.52□□□□□ -1.85
NPIPA3F8WFD2 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.52□□□□□ -1.85
NPIPA3F8WFD2 YPEL5P3-201ENST00000547227 352 ntBASIC3.52□□□□□ -1.85
NPIPA3F8WFD2 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC3.52□□□□□ -1.85
NPIPA3F8WFD2 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC3.52□□□□□ -1.85
NPIPA3F8WFD2 AC245036.5-201ENST00000596330 847 ntBASIC3.52□□□□□ -1.85
NPIPA3F8WFD2 AC024220.1-201ENST00000603675 484 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms