Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 AL670379.9-201ENST00000605428 253 ntBASIC1.98□□□□□ -2.09
COL6A5A8TX70 AL670379.7-201ENST00000605823 252 ntBASIC1.98□□□□□ -2.09
COL6A5A8TX70 AC241377.1-201ENST00000619797 406 ntBASIC1.98□□□□□ -2.09
COL6A5A8TX70 YWHAEP7-203ENST00000622054 312 ntBASIC1.98□□□□□ -2.09
COL6A5A8TX70 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC1.98□□□□□ -2.09
COL6A5A8TX70 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
COL6A5A8TX70 AP006437.1-201ENST00000641440 3685 ntBASIC1.97□□□□□ -2.09
COL6A5A8TX70 RNU6-661P-201ENST00000362409 107 ntBASIC1.97□□□□□ -2.09
COL6A5A8TX70 RNU6-392P-201ENST00000364926 101 ntBASIC1.97□□□□□ -2.09
COL6A5A8TX70 RNA5SP88-201ENST00000365560 109 ntBASIC1.97□□□□□ -2.09
COL6A5A8TX70 ZNF603P-201ENST00000405613 487 ntBASIC1.97□□□□□ -2.09
COL6A5A8TX70 AC004987.3-201ENST00000413879 771 ntBASIC1.97□□□□□ -2.09
COL6A5A8TX70 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC1.97□□□□□ -2.09
COL6A5A8TX70 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC1.97□□□□□ -2.09
COL6A5A8TX70 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC1.97□□□□□ -2.09
COL6A5A8TX70 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC1.97□□□□□ -2.09
COL6A5A8TX70 RNA5SP217-201ENST00000515959 91 ntBASIC1.97□□□□□ -2.09
COL6A5A8TX70 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC1.97□□□□□ -2.09
COL6A5A8TX70 7SK.7-201ENST00000603504 247 ntBASIC1.97□□□□□ -2.09
COL6A5A8TX70 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
COL6A5A8TX70 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
COL6A5A8TX70 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
COL6A5A8TX70 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC1.97□□□□□ -2.09
COL6A5A8TX70 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
COL6A5A8TX70 MTND5P6-201ENST00000422338 1798 ntBASIC1.97□□□□□ -2.09
COL6A5A8TX70 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
COL6A5A8TX70 Y_RNA.224-201ENST00000364308 111 ntBASIC1.97□□□□□ -2.09
COL6A5A8TX70 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
COL6A5A8TX70 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
COL6A5A8TX70 RPS12P5-201ENST00000423449 371 ntBASIC1.97□□□□□ -2.09
COL6A5A8TX70 AC010881.1-201ENST00000433830 235 ntBASIC1.97□□□□□ -2.09
COL6A5A8TX70 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC1.97□□□□□ -2.09
COL6A5A8TX70 MTCO3P20-201ENST00000454926 688 ntBASIC1.97□□□□□ -2.09
COL6A5A8TX70 AL024509.2-201ENST00000493462 493 ntBASIC1.97□□□□□ -2.09
COL6A5A8TX70 AC106872.3-201ENST00000495104 446 ntBASIC1.97□□□□□ -2.09
COL6A5A8TX70 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC1.97□□□□□ -2.09
COL6A5A8TX70 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
COL6A5A8TX70 AL158196.1-201ENST00000616786 434 ntBASIC1.97□□□□□ -2.09
COL6A5A8TX70 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC1.97□□□□□ -2.09
COL6A5A8TX70 AC002543.1-201ENST00000299783 1954 ntBASIC1.97□□□□□ -2.09
COL6A5A8TX70 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC1.96□□□□□ -2.09
COL6A5A8TX70 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC1.96□□□□□ -2.1
COL6A5A8TX70 GABPAP-201ENST00000419271 1356 ntBASIC1.96□□□□□ -2.1
COL6A5A8TX70 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
COL6A5A8TX70 AC068587.2-201ENST00000478386 781 ntBASIC1.96□□□□□ -2.1
COL6A5A8TX70 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC1.96□□□□□ -2.1
COL6A5A8TX70 PSMA3P-201ENST00000555485 635 ntBASIC1.96□□□□□ -2.1
COL6A5A8TX70 MIR4738-201ENST00000579134 87 ntBASIC1.96□□□□□ -2.1
COL6A5A8TX70 AL359715.5-201ENST00000623431 443 ntBASIC1.96□□□□□ -2.1
COL6A5A8TX70 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
COL6A5A8TX70 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
COL6A5A8TX70 AL136964.1-201ENST00000622038 2990 ntBASIC1.96□□□□□ -2.1
COL6A5A8TX70 AL031985.3-201ENST00000565390 2449 ntBASIC1.96□□□□□ -2.1
COL6A5A8TX70 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
COL6A5A8TX70 SNORA68.2-201ENST00000391263 128 ntBASIC1.96□□□□□ -2.1
COL6A5A8TX70 AL359511.1-201ENST00000402970 211 ntBASIC1.96□□□□□ -2.1
COL6A5A8TX70 RNU6-1140P-201ENST00000410517 106 ntBASIC1.96□□□□□ -2.1
COL6A5A8TX70 RN7SKP58-201ENST00000411010 305 ntBASIC1.96□□□□□ -2.1
COL6A5A8TX70 RAC1P3-201ENST00000416129 580 ntBASIC1.96□□□□□ -2.1
COL6A5A8TX70 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC1.96□□□□□ -2.1
COL6A5A8TX70 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.96□□□□□ -2.1
COL6A5A8TX70 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.96□□□□□ -2.1
COL6A5A8TX70 TVP23BP2-201ENST00000455082 615 ntBASIC1.96□□□□□ -2.1
COL6A5A8TX70 AC087385.1-201ENST00000475062 312 ntBASIC1.96□□□□□ -2.1
COL6A5A8TX70 MIR2276-201ENST00000516886 89 ntBASIC1.96□□□□□ -2.1
COL6A5A8TX70 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC1.96□□□□□ -2.1
COL6A5A8TX70 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC1.96□□□□□ -2.1
COL6A5A8TX70 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC1.96□□□□□ -2.1
COL6A5A8TX70 AC092628.2-201ENST00000622492 339 ntBASIC1.96□□□□□ -2.1
COL6A5A8TX70 MAPK10-362ENST00000641864 4484 ntBASIC1.96□□□□□ -2.1
COL6A5A8TX70 AC026241.1-201ENST00000517873 2142 ntBASIC1.96□□□□□ -2.1
COL6A5A8TX70 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
COL6A5A8TX70 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
COL6A5A8TX70 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC1.95□□□□□ -2.1
COL6A5A8TX70 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
COL6A5A8TX70 MIR708-201ENST00000390708 88 ntBASIC1.95□□□□□ -2.1
COL6A5A8TX70 AL024474.1-201ENST00000404655 591 ntBASIC1.95□□□□□ -2.1
COL6A5A8TX70 AL023807.1-201ENST00000407932 359 ntBASIC1.95□□□□□ -2.1
COL6A5A8TX70 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
COL6A5A8TX70 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.95□□□□□ -2.1
COL6A5A8TX70 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC1.95□□□□□ -2.1
COL6A5A8TX70 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC1.95□□□□□ -2.1
COL6A5A8TX70 HMGN1P18-201ENST00000457642 277 ntBASIC1.95□□□□□ -2.1
COL6A5A8TX70 AC005840.1-201ENST00000498412 377 ntBASIC1.95□□□□□ -2.1
COL6A5A8TX70 AF186190.1-201ENST00000517470 480 ntBASIC1.95□□□□□ -2.1
COL6A5A8TX70 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC1.95□□□□□ -2.1
COL6A5A8TX70 OR5AK3P-201ENST00000527486 1297 ntBASIC1.95□□□□□ -2.1
COL6A5A8TX70 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.95□□□□□ -2.1
COL6A5A8TX70 AC135628.1-201ENST00000568867 534 ntBASIC1.95□□□□□ -2.1
COL6A5A8TX70 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC1.95□□□□□ -2.1
COL6A5A8TX70 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.95□□□□□ -2.1
COL6A5A8TX70 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.95□□□□□ -2.1
COL6A5A8TX70 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC1.95□□□□□ -2.1
COL6A5A8TX70 MFSD8-245ENST00000641743 948 ntBASIC1.95□□□□□ -2.1
COL6A5A8TX70 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
COL6A5A8TX70 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
COL6A5A8TX70 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
COL6A5A8TX70 RNU6-249P-201ENST00000363016 102 ntBASIC1.95□□□□□ -2.1
COL6A5A8TX70 TRBV26-201ENST00000456572 344 ntBASIC1.95□□□□□ -2.1
COL6A5A8TX70 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 195.1 ms