Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 RN7SKP86-201ENST00000410454 332 ntBASIC4.88□□□□□ -1.63
SHISA3A0PJX4 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC4.88□□□□□ -1.63
SHISA3A0PJX4 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC4.88□□□□□ -1.63
SHISA3A0PJX4 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.88□□□□□ -1.63
SHISA3A0PJX4 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.88□□□□□ -1.63
SHISA3A0PJX4 RPL7AP49-201ENST00000429522 581 ntBASIC4.88□□□□□ -1.63
SHISA3A0PJX4 FABP7P2-201ENST00000429946 379 ntBASIC4.88□□□□□ -1.63
SHISA3A0PJX4 AL591438.1-201ENST00000433508 581 ntBASIC4.88□□□□□ -1.63
SHISA3A0PJX4 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC4.88□□□□□ -1.63
SHISA3A0PJX4 MTCO3P10-201ENST00000455912 772 ntBASIC4.88□□□□□ -1.63
SHISA3A0PJX4 AC053481.1-201ENST00000467217 306 ntBASIC4.88□□□□□ -1.63
SHISA3A0PJX4 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC4.88□□□□□ -1.63
SHISA3A0PJX4 AC135721.1-201ENST00000497954 479 ntBASIC4.88□□□□□ -1.63
SHISA3A0PJX4 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.88□□□□□ -1.63
SHISA3A0PJX4 AC006499.3-201ENST00000506077 748 ntBASIC4.88□□□□□ -1.63
SHISA3A0PJX4 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC4.88□□□□□ -1.63
SHISA3A0PJX4 MTCO2P24-201ENST00000515611 426 ntBASIC4.88□□□□□ -1.63
SHISA3A0PJX4 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC4.88□□□□□ -1.63
SHISA3A0PJX4 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.88□□□□□ -1.63
SHISA3A0PJX4 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.88□□□□□ -1.63
SHISA3A0PJX4 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.88□□□□□ -1.63
SHISA3A0PJX4 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.88□□□□□ -1.63
SHISA3A0PJX4 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC4.88□□□□□ -1.63
SHISA3A0PJX4 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
SHISA3A0PJX4 CASC22-201ENST00000569713 386 ntTSL 5 BASIC4.88□□□□□ -1.63
SHISA3A0PJX4 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC4.88□□□□□ -1.63
SHISA3A0PJX4 MIR4271-201ENST00000582451 67 ntBASIC4.88□□□□□ -1.63
SHISA3A0PJX4 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC4.88□□□□□ -1.63
SHISA3A0PJX4 AC012409.4-201ENST00000612923 249 ntBASIC4.88□□□□□ -1.63
SHISA3A0PJX4 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
SHISA3A0PJX4 AL591926.1-201ENST00000620542 217 ntBASIC4.88□□□□□ -1.63
SHISA3A0PJX4 AL445363.3-201ENST00000623080 671 ntBASIC4.88□□□□□ -1.63
SHISA3A0PJX4 AP001052.1-201ENST00000626421 99 ntBASIC4.88□□□□□ -1.63
SHISA3A0PJX4 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SHISA3A0PJX4 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.88□□□□□ -1.63
SHISA3A0PJX4 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
SHISA3A0PJX4 AL137003.2-201ENST00000606924 2538 ntBASIC4.88□□□□□ -1.63
SHISA3A0PJX4 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SHISA3A0PJX4 GABPAP-201ENST00000419271 1356 ntBASIC4.88□□□□□ -1.63
SHISA3A0PJX4 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SHISA3A0PJX4 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SHISA3A0PJX4 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC4.88□□□□□ -1.63
SHISA3A0PJX4 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
SHISA3A0PJX4 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
SHISA3A0PJX4 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC4.88□□□□□ -1.63
SHISA3A0PJX4 AC020656.2-201ENST00000613291 5309 ntBASIC4.87□□□□□ -1.63
SHISA3A0PJX4 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
SHISA3A0PJX4 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SHISA3A0PJX4 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
SHISA3A0PJX4 GTF2IP4-201ENST00000453092 2054 ntBASIC4.87□□□□□ -1.63
SHISA3A0PJX4 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
SHISA3A0PJX4 AC144833.1-201ENST00000567953 4089 ntBASIC4.87□□□□□ -1.63
SHISA3A0PJX4 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC4.87□□□□□ -1.63
SHISA3A0PJX4 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SHISA3A0PJX4 RNA5SP232-201ENST00000364144 119 ntBASIC4.87□□□□□ -1.63
SHISA3A0PJX4 RNU6-1040P-201ENST00000383974 107 ntBASIC4.87□□□□□ -1.63
SHISA3A0PJX4 MIR188-201ENST00000385034 86 ntBASIC4.87□□□□□ -1.63
SHISA3A0PJX4 RNU6-550P-201ENST00000391057 101 ntBASIC4.87□□□□□ -1.63
SHISA3A0PJX4 AC016739.1-201ENST00000405359 345 ntBASIC4.87□□□□□ -1.63
SHISA3A0PJX4 COX5BP7-201ENST00000414780 274 ntBASIC4.87□□□□□ -1.63
SHISA3A0PJX4 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.87□□□□□ -1.63
SHISA3A0PJX4 AL590609.2-201ENST00000421430 368 ntBASIC4.87□□□□□ -1.63
SHISA3A0PJX4 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC4.87□□□□□ -1.63
SHISA3A0PJX4 MTCYBP10-201ENST00000424905 650 ntBASIC4.87□□□□□ -1.63
SHISA3A0PJX4 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.87□□□□□ -1.63
SHISA3A0PJX4 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.87□□□□□ -1.63
SHISA3A0PJX4 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.87□□□□□ -1.63
SHISA3A0PJX4 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SHISA3A0PJX4 RPL23AP89-201ENST00000439324 255 ntBASIC4.87□□□□□ -1.63
SHISA3A0PJX4 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.87□□□□□ -1.63
SHISA3A0PJX4 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC4.87□□□□□ -1.63
SHISA3A0PJX4 snoU109.4-201ENST00000458953 143 ntBASIC4.87□□□□□ -1.63
SHISA3A0PJX4 RN7SL188P-201ENST00000469842 285 ntBASIC4.87□□□□□ -1.63
SHISA3A0PJX4 AC010683.1-201ENST00000473673 378 ntBASIC4.87□□□□□ -1.63
SHISA3A0PJX4 AC017037.1-201ENST00000508460 471 ntBASIC4.87□□□□□ -1.63
SHISA3A0PJX4 AC002456.2-201ENST00000509356 380 ntBASIC4.87□□□□□ -1.63
SHISA3A0PJX4 AC108078.2-201ENST00000510750 236 ntBASIC4.87□□□□□ -1.63
SHISA3A0PJX4 APOBEC3AP1-201ENST00000511396 287 ntBASIC4.87□□□□□ -1.63
SHISA3A0PJX4 AC098976.1-201ENST00000513014 541 ntBASIC4.87□□□□□ -1.63
SHISA3A0PJX4 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC4.87□□□□□ -1.63
SHISA3A0PJX4 RNU6-1137P-201ENST00000517073 99 ntBASIC4.87□□□□□ -1.63
SHISA3A0PJX4 RNU6-794P-201ENST00000517261 64 ntBASIC4.87□□□□□ -1.63
SHISA3A0PJX4 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC4.87□□□□□ -1.63
SHISA3A0PJX4 COX6CP5-201ENST00000527162 228 ntBASIC4.87□□□□□ -1.63
SHISA3A0PJX4 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.87□□□□□ -1.63
SHISA3A0PJX4 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.87□□□□□ -1.63
SHISA3A0PJX4 RANP3-201ENST00000530970 276 ntBASIC4.87□□□□□ -1.63
SHISA3A0PJX4 AC063949.1-201ENST00000552900 865 ntBASIC4.87□□□□□ -1.63
SHISA3A0PJX4 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.87□□□□□ -1.63
SHISA3A0PJX4 MIR4680-201ENST00000580906 66 ntBASIC4.87□□□□□ -1.63
SHISA3A0PJX4 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
SHISA3A0PJX4 PRPF19P1-201ENST00000584766 898 ntBASIC4.87□□□□□ -1.63
SHISA3A0PJX4 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC4.87□□□□□ -1.63
SHISA3A0PJX4 AL355812.1-201ENST00000603215 216 ntBASIC4.87□□□□□ -1.63
SHISA3A0PJX4 AL670379.6-201ENST00000603753 252 ntBASIC4.87□□□□□ -1.63
SHISA3A0PJX4 AC008162.1-201ENST00000604718 254 ntBASIC4.87□□□□□ -1.63
SHISA3A0PJX4 AL670379.1-201ENST00000604752 252 ntBASIC4.87□□□□□ -1.63
SHISA3A0PJX4 AL670379.5-201ENST00000605253 252 ntBASIC4.87□□□□□ -1.63
SHISA3A0PJX4 AL670379.8-201ENST00000605353 252 ntBASIC4.87□□□□□ -1.63
SHISA3A0PJX4 AL670379.7-201ENST00000605823 252 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms