Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 RN7SL722P-201ENST00000617780 284 ntBASIC4.11□□□□□ -1.75
TCRBV7S3A2A0A539 RN7SL565P-201ENST00000618246 284 ntBASIC4.11□□□□□ -1.75
TCRBV7S3A2A0A539 AL392088.2-201ENST00000637607 285 ntBASIC4.11□□□□□ -1.75
TCRBV7S3A2A0A539 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.11□□□□□ -1.75
TCRBV7S3A2A0A539 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
TCRBV7S3A2A0A539 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TCRBV7S3A2A0A539 LARP1BP1-201ENST00000506036 1359 ntBASIC4.11□□□□□ -1.75
TCRBV7S3A2A0A539 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TCRBV7S3A2A0A539 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.11□□□□□ -1.75
TCRBV7S3A2A0A539 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.11□□□□□ -1.75
TCRBV7S3A2A0A539 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TCRBV7S3A2A0A539 AC006378.2-201ENST00000623178 2476 ntBASIC4.11□□□□□ -1.75
TCRBV7S3A2A0A539 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.1□□□□□ -1.75
TCRBV7S3A2A0A539 AC097714.1-201ENST00000511272 1647 ntBASIC4.1□□□□□ -1.75
TCRBV7S3A2A0A539 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TCRBV7S3A2A0A539 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.1□□□□□ -1.75
TCRBV7S3A2A0A539 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TCRBV7S3A2A0A539 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TCRBV7S3A2A0A539 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC4.1□□□□□ -1.75
TCRBV7S3A2A0A539 SNORA75-201ENST00000384158 137 ntBASIC4.1□□□□□ -1.75
TCRBV7S3A2A0A539 AC025750.1-201ENST00000399891 379 ntBASIC4.1□□□□□ -1.75
TCRBV7S3A2A0A539 DEFB108C-201ENST00000400154 252 ntBASIC4.1□□□□□ -1.75
TCRBV7S3A2A0A539 AL031679.1-201ENST00000400616 525 ntBASIC4.1□□□□□ -1.75
TCRBV7S3A2A0A539 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC4.1□□□□□ -1.75
TCRBV7S3A2A0A539 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.1□□□□□ -1.75
TCRBV7S3A2A0A539 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.1□□□□□ -1.75
TCRBV7S3A2A0A539 AC012065.2-201ENST00000421295 375 ntBASIC4.1□□□□□ -1.75
TCRBV7S3A2A0A539 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.1□□□□□ -1.75
TCRBV7S3A2A0A539 AC087650.1-201ENST00000431445 468 ntBASIC4.1□□□□□ -1.75
TCRBV7S3A2A0A539 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC4.1□□□□□ -1.75
TCRBV7S3A2A0A539 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.1□□□□□ -1.75
TCRBV7S3A2A0A539 AC092641.1-201ENST00000440229 772 ntBASIC4.1□□□□□ -1.75
TCRBV7S3A2A0A539 SSXP1-201ENST00000453640 473 ntBASIC4.1□□□□□ -1.75
TCRBV7S3A2A0A539 RPL5P32-201ENST00000454085 879 ntBASIC4.1□□□□□ -1.75
TCRBV7S3A2A0A539 PLGLA-201ENST00000465668 449 ntBASIC4.1□□□□□ -1.75
TCRBV7S3A2A0A539 AC022034.3-201ENST00000471393 478 ntBASIC4.1□□□□□ -1.75
TCRBV7S3A2A0A539 RPL7P24-201ENST00000493052 752 ntBASIC4.1□□□□□ -1.75
TCRBV7S3A2A0A539 RPL29P14-201ENST00000495837 428 ntBASIC4.1□□□□□ -1.75
TCRBV7S3A2A0A539 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.1□□□□□ -1.75
TCRBV7S3A2A0A539 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.1□□□□□ -1.75
TCRBV7S3A2A0A539 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.1□□□□□ -1.75
TCRBV7S3A2A0A539 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TCRBV7S3A2A0A539 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TCRBV7S3A2A0A539 AC116347.2-201ENST00000514912 523 ntBASIC4.1□□□□□ -1.75
TCRBV7S3A2A0A539 FABP5P5-201ENST00000515537 406 ntBASIC4.1□□□□□ -1.75
TCRBV7S3A2A0A539 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.1□□□□□ -1.75
TCRBV7S3A2A0A539 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC4.1□□□□□ -1.75
TCRBV7S3A2A0A539 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.1□□□□□ -1.75
TCRBV7S3A2A0A539 OR5AP1P-201ENST00000529730 940 ntBASIC4.1□□□□□ -1.75
TCRBV7S3A2A0A539 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.1□□□□□ -1.75
TCRBV7S3A2A0A539 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
TCRBV7S3A2A0A539 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC4.1□□□□□ -1.75
TCRBV7S3A2A0A539 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.1□□□□□ -1.75
TCRBV7S3A2A0A539 AL161713.1-201ENST00000555538 145 ntBASIC4.1□□□□□ -1.75
TCRBV7S3A2A0A539 AC025627.2-201ENST00000576220 160 ntBASIC4.1□□□□□ -1.75
TCRBV7S3A2A0A539 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.1□□□□□ -1.75
TCRBV7S3A2A0A539 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC4.1□□□□□ -1.75
TCRBV7S3A2A0A539 AP001180.3-201ENST00000582221 145 ntBASIC4.1□□□□□ -1.75
TCRBV7S3A2A0A539 MIR544B-201ENST00000582372 78 ntBASIC4.1□□□□□ -1.75
TCRBV7S3A2A0A539 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC4.1□□□□□ -1.75
TCRBV7S3A2A0A539 BCRP9-201ENST00000605312 388 ntBASIC4.1□□□□□ -1.75
TCRBV7S3A2A0A539 AL590240.3-201ENST00000621416 943 ntBASIC4.1□□□□□ -1.75
TCRBV7S3A2A0A539 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC4.1□□□□□ -1.75
TCRBV7S3A2A0A539 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.1□□□□□ -1.75
TCRBV7S3A2A0A539 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
TCRBV7S3A2A0A539 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
TCRBV7S3A2A0A539 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
TCRBV7S3A2A0A539 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
TCRBV7S3A2A0A539 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
TCRBV7S3A2A0A539 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
TCRBV7S3A2A0A539 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.09□□□□□ -1.75
TCRBV7S3A2A0A539 RNU6-1119P-201ENST00000384349 108 ntBASIC4.09□□□□□ -1.75
TCRBV7S3A2A0A539 RNU11-4P-201ENST00000391149 133 ntBASIC4.09□□□□□ -1.75
TCRBV7S3A2A0A539 RNU4-25P-201ENST00000410569 230 ntBASIC4.09□□□□□ -1.75
TCRBV7S3A2A0A539 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC4.09□□□□□ -1.75
TCRBV7S3A2A0A539 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.09□□□□□ -1.75
TCRBV7S3A2A0A539 AC007899.1-201ENST00000412776 775 ntBASIC4.09□□□□□ -1.75
TCRBV7S3A2A0A539 AC109780.2-201ENST00000413467 845 ntBASIC4.09□□□□□ -1.75
TCRBV7S3A2A0A539 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
TCRBV7S3A2A0A539 AC109583.1-201ENST00000432156 268 ntBASIC4.09□□□□□ -1.75
TCRBV7S3A2A0A539 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC4.09□□□□□ -1.75
TCRBV7S3A2A0A539 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC4.09□□□□□ -1.75
TCRBV7S3A2A0A539 HSPE1P28-201ENST00000443139 211 ntBASIC4.09□□□□□ -1.75
TCRBV7S3A2A0A539 PAXBP1P1-201ENST00000449315 447 ntBASIC4.09□□□□□ -1.75
TCRBV7S3A2A0A539 SUMO2P2-201ENST00000456482 255 ntBASIC4.09□□□□□ -1.75
TCRBV7S3A2A0A539 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.09□□□□□ -1.75
TCRBV7S3A2A0A539 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC4.09□□□□□ -1.75
TCRBV7S3A2A0A539 RPL37P6-202ENST00000464216 403 ntBASIC4.09□□□□□ -1.75
TCRBV7S3A2A0A539 RN7SL738P-201ENST00000470264 297 ntBASIC4.09□□□□□ -1.75
TCRBV7S3A2A0A539 RPS29P22-201ENST00000472363 168 ntBASIC4.09□□□□□ -1.75
TCRBV7S3A2A0A539 AC069499.1-201ENST00000489433 509 ntBASIC4.09□□□□□ -1.75
TCRBV7S3A2A0A539 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.09□□□□□ -1.75
TCRBV7S3A2A0A539 AC091167.1-201ENST00000492017 396 ntBASIC4.09□□□□□ -1.75
TCRBV7S3A2A0A539 ARL2BPP4-201ENST00000506854 471 ntBASIC4.09□□□□□ -1.75
TCRBV7S3A2A0A539 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC4.09□□□□□ -1.75
TCRBV7S3A2A0A539 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC4.09□□□□□ -1.75
TCRBV7S3A2A0A539 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.09□□□□□ -1.75
TCRBV7S3A2A0A539 MTCYBP20-201ENST00000524239 1129 ntBASIC4.09□□□□□ -1.75
TCRBV7S3A2A0A539 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.09□□□□□ -1.75
TCRBV7S3A2A0A539 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 149.1 ms