Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
CLDN16Q9Y5I7 RNU6-730P-201ENST00000383954 104 ntBASIC4.03□□□□□ -1.76
CLDN16Q9Y5I7 Y_RNA.493-201ENST00000384422 102 ntBASIC4.03□□□□□ -1.76
CLDN16Q9Y5I7 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC4.03□□□□□ -1.76
CLDN16Q9Y5I7 RN7SKP235-201ENST00000410662 305 ntBASIC4.03□□□□□ -1.76
CLDN16Q9Y5I7 RNA5SP146-201ENST00000410743 123 ntBASIC4.03□□□□□ -1.76
CLDN16Q9Y5I7 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.03□□□□□ -1.76
CLDN16Q9Y5I7 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.03□□□□□ -1.76
CLDN16Q9Y5I7 AL590233.1-201ENST00000430017 456 ntBASIC4.03□□□□□ -1.76
CLDN16Q9Y5I7 RPL37P21-201ENST00000435890 276 ntBASIC4.03□□□□□ -1.76
CLDN16Q9Y5I7 MUPP-201ENST00000438111 566 ntBASIC4.03□□□□□ -1.76
CLDN16Q9Y5I7 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.03□□□□□ -1.76
CLDN16Q9Y5I7 ABCF2P2-201ENST00000450549 296 ntBASIC4.03□□□□□ -1.76
CLDN16Q9Y5I7 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC4.03□□□□□ -1.76
CLDN16Q9Y5I7 SUMO2P2-201ENST00000456482 255 ntBASIC4.03□□□□□ -1.76
CLDN16Q9Y5I7 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.03□□□□□ -1.76
CLDN16Q9Y5I7 RPS20P24-201ENST00000457473 361 ntBASIC4.03□□□□□ -1.76
CLDN16Q9Y5I7 RAP1BP2-201ENST00000478270 544 ntBASIC4.03□□□□□ -1.76
CLDN16Q9Y5I7 RPL35P6-201ENST00000490024 372 ntBASIC4.03□□□□□ -1.76
CLDN16Q9Y5I7 AC104164.2-201ENST00000496953 495 ntBASIC4.03□□□□□ -1.76
CLDN16Q9Y5I7 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
CLDN16Q9Y5I7 AC010625.1-201ENST00000511296 403 ntBASIC4.03□□□□□ -1.76
CLDN16Q9Y5I7 AC093840.1-201ENST00000511599 336 ntBASIC4.03□□□□□ -1.76
CLDN16Q9Y5I7 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CLDN16Q9Y5I7 RNA5SP49-201ENST00000516450 115 ntBASIC4.03□□□□□ -1.76
CLDN16Q9Y5I7 RNA5SP309-201ENST00000516670 106 ntBASIC4.03□□□□□ -1.76
CLDN16Q9Y5I7 RNA5SP73-201ENST00000516744 108 ntBASIC4.03□□□□□ -1.76
CLDN16Q9Y5I7 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.03□□□□□ -1.76
CLDN16Q9Y5I7 AC025881.1-201ENST00000518851 512 ntBASIC4.03□□□□□ -1.76
CLDN16Q9Y5I7 IGHV3-32-201ENST00000519182 355 ntBASIC4.03□□□□□ -1.76
CLDN16Q9Y5I7 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC4.03□□□□□ -1.76
CLDN16Q9Y5I7 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.03□□□□□ -1.76
CLDN16Q9Y5I7 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.03□□□□□ -1.76
CLDN16Q9Y5I7 AL109766.1-201ENST00000555080 552 ntBASIC4.03□□□□□ -1.76
CLDN16Q9Y5I7 AC006362.1-201ENST00000567392 174 ntBASIC4.03□□□□□ -1.76
CLDN16Q9Y5I7 ABBA01006766.1-201ENST00000584728 294 ntBASIC4.03□□□□□ -1.76
CLDN16Q9Y5I7 AC008759.1-201ENST00000589783 983 ntBASIC4.03□□□□□ -1.76
CLDN16Q9Y5I7 RSL24D1P11-201ENST00000591045 491 ntBASIC4.03□□□□□ -1.76
CLDN16Q9Y5I7 AL161729.3-201ENST00000603533 673 ntBASIC4.03□□□□□ -1.76
CLDN16Q9Y5I7 AL451064.1-201ENST00000607718 471 ntBASIC4.03□□□□□ -1.76
CLDN16Q9Y5I7 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.03□□□□□ -1.76
CLDN16Q9Y5I7 MLECP1-201ENST00000615893 709 ntBASIC4.03□□□□□ -1.76
CLDN16Q9Y5I7 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC4.03□□□□□ -1.76
CLDN16Q9Y5I7 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CLDN16Q9Y5I7 AC139713.2-215ENST00000641428 5037 ntBASIC4.03□□□□□ -1.76
CLDN16Q9Y5I7 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.03□□□□□ -1.76
CLDN16Q9Y5I7 SAGE4P-201ENST00000442271 3381 ntBASIC4.03□□□□□ -1.76
CLDN16Q9Y5I7 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
CLDN16Q9Y5I7 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.03□□□□□ -1.76
CLDN16Q9Y5I7 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
CLDN16Q9Y5I7 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
CLDN16Q9Y5I7 AC097714.1-201ENST00000511272 1647 ntBASIC4.03□□□□□ -1.77
CLDN16Q9Y5I7 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CLDN16Q9Y5I7 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
CLDN16Q9Y5I7 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.02□□□□□ -1.77
CLDN16Q9Y5I7 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CLDN16Q9Y5I7 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.02□□□□□ -1.77
CLDN16Q9Y5I7 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
CLDN16Q9Y5I7 RPL32P3-201ENST00000359025 275 ntBASIC4.02□□□□□ -1.77
CLDN16Q9Y5I7 RNU1-14P-201ENST00000362759 152 ntBASIC4.02□□□□□ -1.77
CLDN16Q9Y5I7 RNU5F-6P-201ENST00000362979 116 ntBASIC4.02□□□□□ -1.77
CLDN16Q9Y5I7 RNA5SP175-201ENST00000364275 119 ntBASIC4.02□□□□□ -1.77
CLDN16Q9Y5I7 RNU4-24P-201ENST00000364565 139 ntBASIC4.02□□□□□ -1.77
CLDN16Q9Y5I7 RNA5SP189-201ENST00000364920 115 ntBASIC4.02□□□□□ -1.77
CLDN16Q9Y5I7 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
CLDN16Q9Y5I7 U8.14-201ENST00000390843 143 ntBASIC4.02□□□□□ -1.77
CLDN16Q9Y5I7 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.02□□□□□ -1.77
CLDN16Q9Y5I7 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.02□□□□□ -1.77
CLDN16Q9Y5I7 AC011933.1-201ENST00000413334 321 ntBASIC4.02□□□□□ -1.77
CLDN16Q9Y5I7 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CLDN16Q9Y5I7 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.02□□□□□ -1.77
CLDN16Q9Y5I7 OFD1P18Y-201ENST00000420889 959 ntBASIC4.02□□□□□ -1.77
CLDN16Q9Y5I7 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.02□□□□□ -1.77
CLDN16Q9Y5I7 RPS27AP12-201ENST00000429552 465 ntBASIC4.02□□□□□ -1.77
CLDN16Q9Y5I7 OFD1P13Y-201ENST00000431179 1232 ntBASIC4.02□□□□□ -1.77
CLDN16Q9Y5I7 SDCBPP1-201ENST00000440192 890 ntBASIC4.02□□□□□ -1.77
CLDN16Q9Y5I7 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.02□□□□□ -1.77
CLDN16Q9Y5I7 AL512326.1-201ENST00000443050 721 ntBASIC4.02□□□□□ -1.77
CLDN16Q9Y5I7 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.02□□□□□ -1.77
CLDN16Q9Y5I7 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.02□□□□□ -1.77
CLDN16Q9Y5I7 AC116533.1-201ENST00000459748 321 ntBASIC4.02□□□□□ -1.77
CLDN16Q9Y5I7 RPS23P7-201ENST00000466210 444 ntBASIC4.02□□□□□ -1.77
CLDN16Q9Y5I7 RN7SL860P-201ENST00000473738 223 ntBASIC4.02□□□□□ -1.77
CLDN16Q9Y5I7 AC078817.1-201ENST00000492623 435 ntBASIC4.02□□□□□ -1.77
CLDN16Q9Y5I7 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC4.02□□□□□ -1.77
CLDN16Q9Y5I7 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CLDN16Q9Y5I7 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC4.02□□□□□ -1.77
CLDN16Q9Y5I7 RN7SKP122-201ENST00000515923 296 ntBASIC4.02□□□□□ -1.77
CLDN16Q9Y5I7 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.02□□□□□ -1.77
CLDN16Q9Y5I7 OR5AP1P-201ENST00000529730 940 ntBASIC4.02□□□□□ -1.77
CLDN16Q9Y5I7 CYCSP29-201ENST00000533731 318 ntBASIC4.02□□□□□ -1.77
CLDN16Q9Y5I7 AP000873.5-201ENST00000533906 236 ntBASIC4.02□□□□□ -1.77
CLDN16Q9Y5I7 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC4.02□□□□□ -1.77
CLDN16Q9Y5I7 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC4.02□□□□□ -1.77
CLDN16Q9Y5I7 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.02□□□□□ -1.77
CLDN16Q9Y5I7 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC4.02□□□□□ -1.77
CLDN16Q9Y5I7 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC4.02□□□□□ -1.77
CLDN16Q9Y5I7 MIR544B-201ENST00000582372 78 ntBASIC4.02□□□□□ -1.77
CLDN16Q9Y5I7 AC083760.1-201ENST00000589621 670 ntBASIC4.02□□□□□ -1.77
CLDN16Q9Y5I7 AL355812.1-201ENST00000603215 216 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms