Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
PCDHGC4Q9Y5F7 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC5.82□□□□□ -1.48
PCDHGC4Q9Y5F7 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PCDHGC4Q9Y5F7 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PCDHGC4Q9Y5F7 NXPH1-205ENST00000602349 1953 ntBASIC5.82□□□□□ -1.48
PCDHGC4Q9Y5F7 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
PCDHGC4Q9Y5F7 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PCDHGC4Q9Y5F7 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.81□□□□□ -1.48
PCDHGC4Q9Y5F7 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
PCDHGC4Q9Y5F7 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
PCDHGC4Q9Y5F7 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PCDHGC4Q9Y5F7 Y_RNA.106-201ENST00000363189 100 ntBASIC5.81□□□□□ -1.48
PCDHGC4Q9Y5F7 SNORA20.1-201ENST00000364790 130 ntBASIC5.81□□□□□ -1.48
PCDHGC4Q9Y5F7 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC5.81□□□□□ -1.48
PCDHGC4Q9Y5F7 HMGB1P20-201ENST00000402555 677 ntBASIC5.81□□□□□ -1.48
PCDHGC4Q9Y5F7 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.81□□□□□ -1.48
PCDHGC4Q9Y5F7 AC234781.4-201ENST00000419384 244 ntBASIC5.81□□□□□ -1.48
PCDHGC4Q9Y5F7 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.81□□□□□ -1.48
PCDHGC4Q9Y5F7 CRIP1P1-201ENST00000427567 185 ntBASIC5.81□□□□□ -1.48
PCDHGC4Q9Y5F7 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.81□□□□□ -1.48
PCDHGC4Q9Y5F7 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC5.81□□□□□ -1.48
PCDHGC4Q9Y5F7 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.81□□□□□ -1.48
PCDHGC4Q9Y5F7 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC5.81□□□□□ -1.48
PCDHGC4Q9Y5F7 RPS15AP27-201ENST00000449183 343 ntBASIC5.81□□□□□ -1.48
PCDHGC4Q9Y5F7 AC112492.4-201ENST00000456549 352 ntBASIC5.81□□□□□ -1.48
PCDHGC4Q9Y5F7 RPS3AP41-201ENST00000462701 778 ntBASIC5.81□□□□□ -1.48
PCDHGC4Q9Y5F7 RPS23P6-201ENST00000466136 431 ntBASIC5.81□□□□□ -1.48
PCDHGC4Q9Y5F7 AL136126.1-201ENST00000473603 402 ntBASIC5.81□□□□□ -1.48
PCDHGC4Q9Y5F7 AC090686.1-201ENST00000481577 749 ntBASIC5.81□□□□□ -1.48
PCDHGC4Q9Y5F7 AC022215.1-201ENST00000481770 362 ntBASIC5.81□□□□□ -1.48
PCDHGC4Q9Y5F7 RN7SKP67-201ENST00000515905 235 ntBASIC5.81□□□□□ -1.48
PCDHGC4Q9Y5F7 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC5.81□□□□□ -1.48
PCDHGC4Q9Y5F7 FAM60DP-201ENST00000524174 632 ntBASIC5.81□□□□□ -1.48
PCDHGC4Q9Y5F7 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.81□□□□□ -1.48
PCDHGC4Q9Y5F7 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.81□□□□□ -1.48
PCDHGC4Q9Y5F7 HSBP1P1-201ENST00000555205 166 ntBASIC5.81□□□□□ -1.48
PCDHGC4Q9Y5F7 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PCDHGC4Q9Y5F7 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC5.81□□□□□ -1.48
PCDHGC4Q9Y5F7 AC008521.2-201ENST00000591021 259 ntBASIC5.81□□□□□ -1.48
PCDHGC4Q9Y5F7 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.81□□□□□ -1.48
PCDHGC4Q9Y5F7 RN7SL544P-201ENST00000617232 284 ntBASIC5.81□□□□□ -1.48
PCDHGC4Q9Y5F7 RN7SL763P-201ENST00000620922 284 ntBASIC5.81□□□□□ -1.48
PCDHGC4Q9Y5F7 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
PCDHGC4Q9Y5F7 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
PCDHGC4Q9Y5F7 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.81□□□□□ -1.48
PCDHGC4Q9Y5F7 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
PCDHGC4Q9Y5F7 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PCDHGC4Q9Y5F7 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PCDHGC4Q9Y5F7 GTF2IP4-201ENST00000453092 2054 ntBASIC5.81□□□□□ -1.48
PCDHGC4Q9Y5F7 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
PCDHGC4Q9Y5F7 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PCDHGC4Q9Y5F7 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PCDHGC4Q9Y5F7 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
PCDHGC4Q9Y5F7 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHGC4Q9Y5F7 SOCS5P3-201ENST00000425115 1576 ntBASIC5.8□□□□□ -1.48
PCDHGC4Q9Y5F7 DNM1P47-203ENST00000571780 12667 ntBASIC5.8□□□□□ -1.48
PCDHGC4Q9Y5F7 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHGC4Q9Y5F7 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.8□□□□□ -1.48
PCDHGC4Q9Y5F7 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.8□□□□□ -1.48
PCDHGC4Q9Y5F7 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.8□□□□□ -1.48
PCDHGC4Q9Y5F7 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHGC4Q9Y5F7 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
PCDHGC4Q9Y5F7 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHGC4Q9Y5F7 Y_RNA.39-201ENST00000362620 98 ntBASIC5.8□□□□□ -1.48
PCDHGC4Q9Y5F7 RNU6-188P-201ENST00000364207 107 ntBASIC5.8□□□□□ -1.48
PCDHGC4Q9Y5F7 RNA5SP284-201ENST00000384547 118 ntBASIC5.8□□□□□ -1.48
PCDHGC4Q9Y5F7 MT-TW-201ENST00000387382 68 ntBASIC5.8□□□□□ -1.48
PCDHGC4Q9Y5F7 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
PCDHGC4Q9Y5F7 RPL21P1-201ENST00000399532 476 ntBASIC5.8□□□□□ -1.48
PCDHGC4Q9Y5F7 MIR1302-6-201ENST00000408466 90 ntBASIC5.8□□□□□ -1.48
PCDHGC4Q9Y5F7 BX682237.1-201ENST00000415016 335 ntBASIC5.8□□□□□ -1.48
PCDHGC4Q9Y5F7 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC5.8□□□□□ -1.48
PCDHGC4Q9Y5F7 USMG5P1-201ENST00000425964 177 ntBASIC5.8□□□□□ -1.48
PCDHGC4Q9Y5F7 MTND6P12-201ENST00000428247 522 ntBASIC5.8□□□□□ -1.48
PCDHGC4Q9Y5F7 RPL36AP6-201ENST00000435770 321 ntBASIC5.8□□□□□ -1.48
PCDHGC4Q9Y5F7 RPL36AP39-201ENST00000445859 318 ntBASIC5.8□□□□□ -1.48
PCDHGC4Q9Y5F7 AL353752.1-201ENST00000454946 260 ntBASIC5.8□□□□□ -1.48
PCDHGC4Q9Y5F7 RPL12P39-201ENST00000455456 496 ntBASIC5.8□□□□□ -1.48
PCDHGC4Q9Y5F7 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.8□□□□□ -1.48
PCDHGC4Q9Y5F7 AC005726.1-201ENST00000494679 427 ntBASIC5.8□□□□□ -1.48
PCDHGC4Q9Y5F7 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.8□□□□□ -1.48
PCDHGC4Q9Y5F7 RNU6-1023P-201ENST00000516137 106 ntBASIC5.8□□□□□ -1.48
PCDHGC4Q9Y5F7 RNA5SP384-201ENST00000516615 116 ntBASIC5.8□□□□□ -1.48
PCDHGC4Q9Y5F7 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.8□□□□□ -1.48
PCDHGC4Q9Y5F7 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.8□□□□□ -1.48
PCDHGC4Q9Y5F7 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC5.8□□□□□ -1.48
PCDHGC4Q9Y5F7 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.8□□□□□ -1.48
PCDHGC4Q9Y5F7 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHGC4Q9Y5F7 MIR3614-201ENST00000581261 86 ntBASIC5.8□□□□□ -1.48
PCDHGC4Q9Y5F7 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC5.8□□□□□ -1.48
PCDHGC4Q9Y5F7 AC243654.2-201ENST00000612843 443 ntBASIC5.8□□□□□ -1.48
PCDHGC4Q9Y5F7 AL136313.1-201ENST00000624804 202 ntBASIC5.8□□□□□ -1.48
PCDHGC4Q9Y5F7 AC130650.2-201ENST00000618736 2403 ntBASIC5.8□□□□□ -1.48
PCDHGC4Q9Y5F7 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
PCDHGC4Q9Y5F7 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
PCDHGC4Q9Y5F7 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHGC4Q9Y5F7 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
PCDHGC4Q9Y5F7 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PCDHGC4Q9Y5F7 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
PCDHGC4Q9Y5F7 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms