Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC2.35□□□□□ -2.03
AP4S1Q9Y587 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.35□□□□□ -2.03
AP4S1Q9Y587 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC2.35□□□□□ -2.03
AP4S1Q9Y587 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.35□□□□□ -2.03
AP4S1Q9Y587 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC2.35□□□□□ -2.03
AP4S1Q9Y587 AC016717.3-201ENST00000624730 554 ntBASIC2.35□□□□□ -2.03
AP4S1Q9Y587 ABBA01000935.2-201ENST00000637477 838 ntBASIC2.35□□□□□ -2.03
AP4S1Q9Y587 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
AP4S1Q9Y587 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
AP4S1Q9Y587 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
AP4S1Q9Y587 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
AP4S1Q9Y587 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.34□□□□□ -2.03
AP4S1Q9Y587 MIR21-201ENST00000362134 72 ntBASIC2.34□□□□□ -2.03
AP4S1Q9Y587 MIR422A-201ENST00000362286 90 ntBASIC2.34□□□□□ -2.03
AP4S1Q9Y587 RNA5SP456-201ENST00000364002 114 ntBASIC2.34□□□□□ -2.03
AP4S1Q9Y587 RNU1-51P-201ENST00000365345 176 ntBASIC2.34□□□□□ -2.03
AP4S1Q9Y587 SNORA41-201ENST00000384675 132 ntBASIC2.34□□□□□ -2.03
AP4S1Q9Y587 AL356057.3-201ENST00000402607 340 ntBASIC2.34□□□□□ -2.03
AP4S1Q9Y587 EEF1A1P41-201ENST00000414667 207 ntBASIC2.34□□□□□ -2.03
AP4S1Q9Y587 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC2.34□□□□□ -2.03
AP4S1Q9Y587 AC241520.1-201ENST00000422654 1099 ntBASIC2.34□□□□□ -2.03
AP4S1Q9Y587 RPS6P14-201ENST00000425165 719 ntBASIC2.34□□□□□ -2.03
AP4S1Q9Y587 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC2.34□□□□□ -2.03
AP4S1Q9Y587 PRDX3P3-201ENST00000447765 522 ntBASIC2.34□□□□□ -2.03
AP4S1Q9Y587 RPL7P52-201ENST00000449200 742 ntBASIC2.34□□□□□ -2.03
AP4S1Q9Y587 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC2.34□□□□□ -2.03
AP4S1Q9Y587 RPS4XP6-201ENST00000477670 797 ntBASIC2.34□□□□□ -2.03
AP4S1Q9Y587 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
AP4S1Q9Y587 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC2.34□□□□□ -2.03
AP4S1Q9Y587 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.34□□□□□ -2.03
AP4S1Q9Y587 RNA5SP82-201ENST00000516707 92 ntBASIC2.34□□□□□ -2.03
AP4S1Q9Y587 SNORA31.21-201ENST00000517180 77 ntBASIC2.34□□□□□ -2.03
AP4S1Q9Y587 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.34□□□□□ -2.03
AP4S1Q9Y587 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.34□□□□□ -2.03
AP4S1Q9Y587 OR5AK3P-201ENST00000527486 1297 ntBASIC2.34□□□□□ -2.03
AP4S1Q9Y587 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC2.34□□□□□ -2.03
AP4S1Q9Y587 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.34□□□□□ -2.03
AP4S1Q9Y587 AC093227.2-201ENST00000589357 285 ntBASIC2.34□□□□□ -2.03
AP4S1Q9Y587 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
AP4S1Q9Y587 AP000676.4-201ENST00000624659 623 ntBASIC2.34□□□□□ -2.03
AP4S1Q9Y587 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.03
AP4S1Q9Y587 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
AP4S1Q9Y587 FAT1P1-201ENST00000406588 507 ntBASIC2.33□□□□□ -2.04
AP4S1Q9Y587 DHFRP5-201ENST00000406944 564 ntBASIC2.33□□□□□ -2.04
AP4S1Q9Y587 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC2.33□□□□□ -2.04
AP4S1Q9Y587 AL158156.1-201ENST00000422509 473 ntBASIC2.33□□□□□ -2.04
AP4S1Q9Y587 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC2.33□□□□□ -2.04
AP4S1Q9Y587 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.33□□□□□ -2.04
AP4S1Q9Y587 Z96811.1-201ENST00000445880 108 ntBASIC2.33□□□□□ -2.04
AP4S1Q9Y587 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC2.33□□□□□ -2.04
AP4S1Q9Y587 RPL37P6-202ENST00000464216 403 ntBASIC2.33□□□□□ -2.04
AP4S1Q9Y587 NCOR1P1-202ENST00000486162 291 ntBASIC2.33□□□□□ -2.04
AP4S1Q9Y587 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC2.33□□□□□ -2.04
AP4S1Q9Y587 AC026427.2-201ENST00000506228 536 ntBASIC2.33□□□□□ -2.04
AP4S1Q9Y587 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC2.33□□□□□ -2.04
AP4S1Q9Y587 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.33□□□□□ -2.04
AP4S1Q9Y587 DUXAP2-201ENST00000519198 589 ntBASIC2.33□□□□□ -2.04
AP4S1Q9Y587 AC243972.3-201ENST00000539655 198 ntBASIC2.33□□□□□ -2.04
AP4S1Q9Y587 AC128657.1-201ENST00000549459 145 ntBASIC2.33□□□□□ -2.04
AP4S1Q9Y587 CYCSP39-201ENST00000565821 309 ntBASIC2.33□□□□□ -2.04
AP4S1Q9Y587 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.33□□□□□ -2.04
AP4S1Q9Y587 DUXAP4-201ENST00000603046 613 ntBASIC2.33□□□□□ -2.04
AP4S1Q9Y587 AC112503.1-201ENST00000608436 391 ntBASIC2.33□□□□□ -2.04
AP4S1Q9Y587 MIR6748-201ENST00000610433 71 ntBASIC2.33□□□□□ -2.04
AP4S1Q9Y587 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.33□□□□□ -2.04
AP4S1Q9Y587 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
AP4S1Q9Y587 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC2.33□□□□□ -2.04
AP4S1Q9Y587 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
AP4S1Q9Y587 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
AP4S1Q9Y587 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.32□□□□□ -2.04
AP4S1Q9Y587 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
AP4S1Q9Y587 RNA5SP479-201ENST00000364858 117 ntBASIC2.32□□□□□ -2.04
AP4S1Q9Y587 ARF4P3-201ENST00000397387 509 ntBASIC2.32□□□□□ -2.04
AP4S1Q9Y587 AL138885.1-201ENST00000405921 675 ntBASIC2.32□□□□□ -2.04
AP4S1Q9Y587 AC098592.2-201ENST00000413158 265 ntBASIC2.32□□□□□ -2.04
AP4S1Q9Y587 AL645937.1-202ENST00000421799 937 ntBASIC2.32□□□□□ -2.04
AP4S1Q9Y587 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.32□□□□□ -2.04
AP4S1Q9Y587 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC2.32□□□□□ -2.04
AP4S1Q9Y587 UBE2V1P1-201ENST00000430836 445 ntBASIC2.32□□□□□ -2.04
AP4S1Q9Y587 AL139132.1-201ENST00000431587 344 ntBASIC2.32□□□□□ -2.04
AP4S1Q9Y587 AC087499.2-201ENST00000432861 149 ntBASIC2.32□□□□□ -2.04
AP4S1Q9Y587 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.32□□□□□ -2.04
AP4S1Q9Y587 H2AFZP6-201ENST00000444403 394 ntBASIC2.32□□□□□ -2.04
AP4S1Q9Y587 AL031659.1-201ENST00000447075 539 ntBASIC2.32□□□□□ -2.04
AP4S1Q9Y587 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC2.32□□□□□ -2.04
AP4S1Q9Y587 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.32□□□□□ -2.04
AP4S1Q9Y587 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.32□□□□□ -2.04
AP4S1Q9Y587 HIGD1AP13-201ENST00000509878 289 ntBASIC2.32□□□□□ -2.04
AP4S1Q9Y587 AC010374.2-201ENST00000512933 535 ntBASIC2.32□□□□□ -2.04
AP4S1Q9Y587 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC2.32□□□□□ -2.04
AP4S1Q9Y587 AP003102.1-201ENST00000525638 661 ntBASIC2.32□□□□□ -2.04
AP4S1Q9Y587 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
AP4S1Q9Y587 OR4R2P-201ENST00000530815 597 ntBASIC2.32□□□□□ -2.04
AP4S1Q9Y587 PTP4A1P6-201ENST00000531034 478 ntBASIC2.32□□□□□ -2.04
AP4S1Q9Y587 AC007115.1-201ENST00000546853 234 ntBASIC2.32□□□□□ -2.04
AP4S1Q9Y587 AC078814.3-201ENST00000553036 491 ntBASIC2.32□□□□□ -2.04
AP4S1Q9Y587 AC007448.1-201ENST00000582714 234 ntBASIC2.32□□□□□ -2.04
AP4S1Q9Y587 MIR6895-201ENST00000613497 78 ntBASIC2.32□□□□□ -2.04
AP4S1Q9Y587 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
AP4S1Q9Y587 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms