Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
HDGFL3Q9Y3E1 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
HDGFL3Q9Y3E1 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
HDGFL3Q9Y3E1 AL512646.1-201ENST00000269395 1077 ntBASIC2.7□□□□□ -1.98
HDGFL3Q9Y3E1 MIR422A-201ENST00000362286 90 ntBASIC2.7□□□□□ -1.98
HDGFL3Q9Y3E1 RNU6-629P-201ENST00000384061 103 ntBASIC2.7□□□□□ -1.98
HDGFL3Q9Y3E1 SNORA54-201ENST00000384281 123 ntBASIC2.7□□□□□ -1.98
HDGFL3Q9Y3E1 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
HDGFL3Q9Y3E1 AL138885.1-201ENST00000405921 675 ntBASIC2.7□□□□□ -1.98
HDGFL3Q9Y3E1 AL024507.1-201ENST00000412741 274 ntBASIC2.7□□□□□ -1.98
HDGFL3Q9Y3E1 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.7□□□□□ -1.98
HDGFL3Q9Y3E1 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.7□□□□□ -1.98
HDGFL3Q9Y3E1 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.7□□□□□ -1.98
HDGFL3Q9Y3E1 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC2.7□□□□□ -1.98
HDGFL3Q9Y3E1 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC2.7□□□□□ -1.98
HDGFL3Q9Y3E1 AP001992.1-205ENST00000462248 379 ntBASIC2.7□□□□□ -1.98
HDGFL3Q9Y3E1 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
HDGFL3Q9Y3E1 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC2.7□□□□□ -1.98
HDGFL3Q9Y3E1 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC2.7□□□□□ -1.98
HDGFL3Q9Y3E1 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.7□□□□□ -1.98
HDGFL3Q9Y3E1 RN7SKP57-201ENST00000517248 293 ntBASIC2.7□□□□□ -1.98
HDGFL3Q9Y3E1 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.7□□□□□ -1.98
HDGFL3Q9Y3E1 HAUS1P3-201ENST00000523909 662 ntBASIC2.7□□□□□ -1.98
HDGFL3Q9Y3E1 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC2.7□□□□□ -1.98
HDGFL3Q9Y3E1 AC139103.1-201ENST00000534696 1030 ntBASIC2.7□□□□□ -1.98
HDGFL3Q9Y3E1 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC2.7□□□□□ -1.98
HDGFL3Q9Y3E1 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.7□□□□□ -1.98
HDGFL3Q9Y3E1 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.7□□□□□ -1.98
HDGFL3Q9Y3E1 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.7□□□□□ -1.98
HDGFL3Q9Y3E1 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC2.7□□□□□ -1.98
HDGFL3Q9Y3E1 IGHV3-29-201ENST00000604817 344 ntBASIC2.7□□□□□ -1.98
HDGFL3Q9Y3E1 AC020923.1-201ENST00000624021 917 ntBASIC2.7□□□□□ -1.98
HDGFL3Q9Y3E1 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
HDGFL3Q9Y3E1 AC139713.2-210ENST00000641741 992 ntBASIC2.7□□□□□ -1.98
HDGFL3Q9Y3E1 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.7□□□□□ -1.98
HDGFL3Q9Y3E1 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
HDGFL3Q9Y3E1 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.7□□□□□ -1.98
HDGFL3Q9Y3E1 AC000403.1-201ENST00000613696 3585 ntBASIC2.7□□□□□ -1.98
HDGFL3Q9Y3E1 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.7□□□□□ -1.98
HDGFL3Q9Y3E1 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.7□□□□□ -1.98
HDGFL3Q9Y3E1 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
HDGFL3Q9Y3E1 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.7□□□□□ -1.98
HDGFL3Q9Y3E1 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
HDGFL3Q9Y3E1 AC004925.1-201ENST00000624256 2706 ntBASIC2.7□□□□□ -1.98
HDGFL3Q9Y3E1 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.69□□□□□ -1.98
HDGFL3Q9Y3E1 MAPK6PS3-201ENST00000403865 2162 ntBASIC2.69□□□□□ -1.98
HDGFL3Q9Y3E1 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
HDGFL3Q9Y3E1 RNU6-1243P-201ENST00000364028 107 ntBASIC2.69□□□□□ -1.98
HDGFL3Q9Y3E1 RNU6-851P-201ENST00000384565 107 ntBASIC2.69□□□□□ -1.98
HDGFL3Q9Y3E1 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.69□□□□□ -1.98
HDGFL3Q9Y3E1 AL031121.1-201ENST00000406553 254 ntBASIC2.69□□□□□ -1.98
HDGFL3Q9Y3E1 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.69□□□□□ -1.98
HDGFL3Q9Y3E1 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC2.69□□□□□ -1.98
HDGFL3Q9Y3E1 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC2.69□□□□□ -1.98
HDGFL3Q9Y3E1 AL445528.1-201ENST00000426330 420 ntBASIC2.69□□□□□ -1.98
HDGFL3Q9Y3E1 RPL21P66-201ENST00000426566 466 ntBASIC2.69□□□□□ -1.98
HDGFL3Q9Y3E1 MTCO1P57-201ENST00000432182 261 ntBASIC2.69□□□□□ -1.98
HDGFL3Q9Y3E1 HSPE1P28-201ENST00000443139 211 ntBASIC2.69□□□□□ -1.98
HDGFL3Q9Y3E1 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC2.69□□□□□ -1.98
HDGFL3Q9Y3E1 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.69□□□□□ -1.98
HDGFL3Q9Y3E1 RPL7P59-201ENST00000447700 943 ntBASIC2.69□□□□□ -1.98
HDGFL3Q9Y3E1 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.69□□□□□ -1.98
HDGFL3Q9Y3E1 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC2.69□□□□□ -1.98
HDGFL3Q9Y3E1 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.69□□□□□ -1.98
HDGFL3Q9Y3E1 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC2.69□□□□□ -1.98
HDGFL3Q9Y3E1 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.69□□□□□ -1.98
HDGFL3Q9Y3E1 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.69□□□□□ -1.98
HDGFL3Q9Y3E1 AC117440.1-201ENST00000474107 571 ntBASIC2.69□□□□□ -1.98
HDGFL3Q9Y3E1 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC2.69□□□□□ -1.98
HDGFL3Q9Y3E1 MTCO3P35-201ENST00000485582 781 ntBASIC2.69□□□□□ -1.98
HDGFL3Q9Y3E1 AC006483.1-201ENST00000487308 313 ntBASIC2.69□□□□□ -1.98
HDGFL3Q9Y3E1 AC090543.1-201ENST00000492168 485 ntBASIC2.69□□□□□ -1.98
HDGFL3Q9Y3E1 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC2.69□□□□□ -1.98
HDGFL3Q9Y3E1 AC108157.1-201ENST00000510511 539 ntBASIC2.69□□□□□ -1.98
HDGFL3Q9Y3E1 RPL7L1P13-201ENST00000511702 739 ntBASIC2.69□□□□□ -1.98
HDGFL3Q9Y3E1 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC2.69□□□□□ -1.98
HDGFL3Q9Y3E1 RNU6-1073P-201ENST00000517182 106 ntBASIC2.69□□□□□ -1.98
HDGFL3Q9Y3E1 HMGB1P46-201ENST00000520062 610 ntBASIC2.69□□□□□ -1.98
HDGFL3Q9Y3E1 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC2.69□□□□□ -1.98
HDGFL3Q9Y3E1 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.69□□□□□ -1.98
HDGFL3Q9Y3E1 AC007536.1-201ENST00000533382 349 ntBASIC2.69□□□□□ -1.98
HDGFL3Q9Y3E1 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC2.69□□□□□ -1.98
HDGFL3Q9Y3E1 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.69□□□□□ -1.98
HDGFL3Q9Y3E1 AC055876.1-202ENST00000567053 138 ntBASIC2.69□□□□□ -1.98
HDGFL3Q9Y3E1 AC125494.3-201ENST00000602759 455 ntBASIC2.69□□□□□ -1.98
HDGFL3Q9Y3E1 AL109653.1-201ENST00000603091 248 ntBASIC2.69□□□□□ -1.98
HDGFL3Q9Y3E1 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.69□□□□□ -1.98
HDGFL3Q9Y3E1 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC2.69□□□□□ -1.98
HDGFL3Q9Y3E1 CYCSP41-201ENST00000616920 296 ntBASIC2.69□□□□□ -1.98
HDGFL3Q9Y3E1 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC2.69□□□□□ -1.98
HDGFL3Q9Y3E1 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC2.69□□□□□ -1.98
HDGFL3Q9Y3E1 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC2.69□□□□□ -1.98
HDGFL3Q9Y3E1 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
HDGFL3Q9Y3E1 MTND5P28-201ENST00000438005 1594 ntBASIC2.69□□□□□ -1.98
HDGFL3Q9Y3E1 AL359893.1-201ENST00000447628 1580 ntBASIC2.69□□□□□ -1.98
HDGFL3Q9Y3E1 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
HDGFL3Q9Y3E1 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.69□□□□□ -1.98
HDGFL3Q9Y3E1 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.69□□□□□ -1.98
HDGFL3Q9Y3E1 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
HDGFL3Q9Y3E1 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms