Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 AC006020.1-201ENST00000420179 1854 ntBASIC3.78□□□□□ -1.8
SHANK2Q9UPX8 AC087565.3-202ENST00000642085 1603 ntBASIC3.78□□□□□ -1.8
SHANK2Q9UPX8 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
SHANK2Q9UPX8 RPL21P132-201ENST00000331267 462 ntBASIC3.78□□□□□ -1.8
SHANK2Q9UPX8 AC069218.2-201ENST00000411665 344 ntBASIC3.78□□□□□ -1.8
SHANK2Q9UPX8 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.78□□□□□ -1.8
SHANK2Q9UPX8 PTP4A1P5-201ENST00000420305 455 ntBASIC3.78□□□□□ -1.8
SHANK2Q9UPX8 UBE2V2P4-201ENST00000447495 259 ntBASIC3.78□□□□□ -1.8
SHANK2Q9UPX8 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC3.78□□□□□ -1.8
SHANK2Q9UPX8 IGKV2-36-201ENST00000519999 223 ntBASIC3.78□□□□□ -1.8
SHANK2Q9UPX8 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.78□□□□□ -1.8
SHANK2Q9UPX8 AC007938.3-201ENST00000604965 623 ntBASIC3.78□□□□□ -1.8
SHANK2Q9UPX8 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
SHANK2Q9UPX8 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SHANK2Q9UPX8 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SHANK2Q9UPX8 RPS20P25-201ENST00000412447 352 ntBASIC3.77□□□□□ -1.81
SHANK2Q9UPX8 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.77□□□□□ -1.81
SHANK2Q9UPX8 AL137014.1-201ENST00000420490 1226 ntBASIC3.77□□□□□ -1.81
SHANK2Q9UPX8 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC3.77□□□□□ -1.81
SHANK2Q9UPX8 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.77□□□□□ -1.81
SHANK2Q9UPX8 SNORA70.14-201ENST00000516205 110 ntBASIC3.77□□□□□ -1.81
SHANK2Q9UPX8 AC128657.1-201ENST00000549459 145 ntBASIC3.77□□□□□ -1.81
SHANK2Q9UPX8 AL845331.3-202ENST00000562856 261 ntBASIC3.77□□□□□ -1.81
SHANK2Q9UPX8 MIR1273D-201ENST00000577266 86 ntBASIC3.77□□□□□ -1.81
SHANK2Q9UPX8 AC123768.4-201ENST00000616244 701 ntBASIC3.77□□□□□ -1.81
SHANK2Q9UPX8 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.77□□□□□ -1.81
SHANK2Q9UPX8 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
SHANK2Q9UPX8 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SHANK2Q9UPX8 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.76□□□□□ -1.81
SHANK2Q9UPX8 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
SHANK2Q9UPX8 Y_RNA.508-201ENST00000384502 114 ntBASIC3.76□□□□□ -1.81
SHANK2Q9UPX8 AL450338.1-201ENST00000407987 512 ntBASIC3.76□□□□□ -1.81
SHANK2Q9UPX8 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.76□□□□□ -1.81
SHANK2Q9UPX8 DPH3P2-201ENST00000422618 250 ntBASIC3.76□□□□□ -1.81
SHANK2Q9UPX8 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.76□□□□□ -1.81
SHANK2Q9UPX8 AC005921.1-201ENST00000510589 286 ntBASIC3.76□□□□□ -1.81
SHANK2Q9UPX8 AP001207.1-201ENST00000524051 481 ntBASIC3.76□□□□□ -1.81
SHANK2Q9UPX8 AC010928.3-201ENST00000587712 541 ntBASIC3.76□□□□□ -1.81
SHANK2Q9UPX8 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.76□□□□□ -1.81
SHANK2Q9UPX8 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SHANK2Q9UPX8 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
SHANK2Q9UPX8 AC009487.2-201ENST00000420969 6821 ntBASIC3.76□□□□□ -1.81
SHANK2Q9UPX8 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.75□□□□□ -1.81
SHANK2Q9UPX8 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SHANK2Q9UPX8 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
SHANK2Q9UPX8 SNORD114-30-201ENST00000364448 72 ntBASIC3.75□□□□□ -1.81
SHANK2Q9UPX8 Y_RNA.338-201ENST00000365320 114 ntBASIC3.75□□□□□ -1.81
SHANK2Q9UPX8 EI24P2-201ENST00000397776 1076 ntBASIC3.75□□□□□ -1.81
SHANK2Q9UPX8 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.75□□□□□ -1.81
SHANK2Q9UPX8 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.75□□□□□ -1.81
SHANK2Q9UPX8 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC3.75□□□□□ -1.81
SHANK2Q9UPX8 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.75□□□□□ -1.81
SHANK2Q9UPX8 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.75□□□□□ -1.81
SHANK2Q9UPX8 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.75□□□□□ -1.81
SHANK2Q9UPX8 AC007423.1-201ENST00000605009 627 ntBASIC3.75□□□□□ -1.81
SHANK2Q9UPX8 AC103710.3-201ENST00000608157 948 ntBASIC3.75□□□□□ -1.81
SHANK2Q9UPX8 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
SHANK2Q9UPX8 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
SHANK2Q9UPX8 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
SHANK2Q9UPX8 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SHANK2Q9UPX8 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
SHANK2Q9UPX8 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SHANK2Q9UPX8 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SHANK2Q9UPX8 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SHANK2Q9UPX8 HIGD1AP2-201ENST00000446367 280 ntBASIC3.74□□□□□ -1.81
SHANK2Q9UPX8 ST13P20-201ENST00000447996 1065 ntBASIC3.74□□□□□ -1.81
SHANK2Q9UPX8 RANP3-201ENST00000530970 276 ntBASIC3.74□□□□□ -1.81
SHANK2Q9UPX8 AP000867.2-201ENST00000532468 320 ntBASIC3.74□□□□□ -1.81
SHANK2Q9UPX8 AC123904.3-201ENST00000547218 814 ntBASIC3.74□□□□□ -1.81
SHANK2Q9UPX8 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC3.74□□□□□ -1.81
SHANK2Q9UPX8 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC3.74□□□□□ -1.81
SHANK2Q9UPX8 MIR5092-201ENST00000583139 88 ntBASIC3.74□□□□□ -1.81
SHANK2Q9UPX8 FRG1DP-201ENST00000635586 771 ntBASIC3.74□□□□□ -1.81
SHANK2Q9UPX8 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SHANK2Q9UPX8 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
SHANK2Q9UPX8 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.74□□□□□ -1.81
SHANK2Q9UPX8 AC066616.2-201ENST00000559334 1481 ntBASIC3.74□□□□□ -1.81
SHANK2Q9UPX8 AL161781.1-201ENST00000354277 403 ntBASIC3.73□□□□□ -1.81
SHANK2Q9UPX8 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
SHANK2Q9UPX8 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC3.73□□□□□ -1.81
SHANK2Q9UPX8 AC008280.2-201ENST00000455473 307 ntBASIC3.73□□□□□ -1.81
SHANK2Q9UPX8 AC091544.1-201ENST00000484702 348 ntBASIC3.73□□□□□ -1.81
SHANK2Q9UPX8 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC3.73□□□□□ -1.81
SHANK2Q9UPX8 RN7SKP219-201ENST00000516825 296 ntBASIC3.73□□□□□ -1.81
SHANK2Q9UPX8 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.73□□□□□ -1.81
SHANK2Q9UPX8 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC3.73□□□□□ -1.81
SHANK2Q9UPX8 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
SHANK2Q9UPX8 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SHANK2Q9UPX8 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC3.73□□□□□ -1.81
SHANK2Q9UPX8 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SHANK2Q9UPX8 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SHANK2Q9UPX8 AC090229.1-201ENST00000590983 1609 ntBASIC3.73□□□□□ -1.81
SHANK2Q9UPX8 RN7SKP44-201ENST00000363602 316 ntBASIC3.73□□□□□ -1.81
SHANK2Q9UPX8 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.73□□□□□ -1.81
SHANK2Q9UPX8 RNA5SP129-201ENST00000410276 118 ntBASIC3.73□□□□□ -1.81
SHANK2Q9UPX8 NANOGP5-201ENST00000424456 877 ntBASIC3.73□□□□□ -1.81
SHANK2Q9UPX8 AL009174.1-201ENST00000426577 416 ntBASIC3.73□□□□□ -1.81
SHANK2Q9UPX8 AC124916.1-201ENST00000444020 547 ntBASIC3.73□□□□□ -1.81
SHANK2Q9UPX8 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.73□□□□□ -1.81
SHANK2Q9UPX8 HMGB1P25-201ENST00000468402 607 ntBASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms