Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 RNA5SP383-201ENST00000362934 120 ntBASIC3.83□□□□□ -1.8
CTNNA3Q9UI47 Y_RNA.510-201ENST00000384511 114 ntBASIC3.83□□□□□ -1.8
CTNNA3Q9UI47 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
CTNNA3Q9UI47 AL357075.1-201ENST00000404107 726 ntBASIC3.83□□□□□ -1.8
CTNNA3Q9UI47 RNU4-47P-201ENST00000410876 114 ntBASIC3.83□□□□□ -1.8
CTNNA3Q9UI47 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.83□□□□□ -1.8
CTNNA3Q9UI47 NDUFB4P5-201ENST00000415445 361 ntBASIC3.83□□□□□ -1.8
CTNNA3Q9UI47 AC063979.1-201ENST00000415539 377 ntBASIC3.83□□□□□ -1.8
CTNNA3Q9UI47 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.83□□□□□ -1.8
CTNNA3Q9UI47 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.83□□□□□ -1.8
CTNNA3Q9UI47 HMGN2P20-201ENST00000437531 273 ntBASIC3.83□□□□□ -1.8
CTNNA3Q9UI47 AC004865.1-201ENST00000442276 1003 ntBASIC3.83□□□□□ -1.8
CTNNA3Q9UI47 RSL24D1P2-201ENST00000445584 366 ntBASIC3.83□□□□□ -1.8
CTNNA3Q9UI47 SSXP4-201ENST00000451349 245 ntBASIC3.83□□□□□ -1.8
CTNNA3Q9UI47 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.83□□□□□ -1.8
CTNNA3Q9UI47 AC008885.2-201ENST00000509506 930 ntBASIC3.83□□□□□ -1.8
CTNNA3Q9UI47 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.83□□□□□ -1.8
CTNNA3Q9UI47 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.83□□□□□ -1.8
CTNNA3Q9UI47 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.83□□□□□ -1.8
CTNNA3Q9UI47 AC091488.1-201ENST00000604239 660 ntBASIC3.83□□□□□ -1.8
CTNNA3Q9UI47 AC018926.3-201ENST00000618841 406 ntBASIC3.83□□□□□ -1.8
CTNNA3Q9UI47 AC104820.1-201ENST00000624183 307 ntBASIC3.83□□□□□ -1.8
CTNNA3Q9UI47 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.83□□□□□ -1.8
CTNNA3Q9UI47 AC104446.1-201ENST00000613728 1321 ntBASIC3.83□□□□□ -1.8
CTNNA3Q9UI47 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CTNNA3Q9UI47 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
CTNNA3Q9UI47 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.83□□□□□ -1.8
CTNNA3Q9UI47 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.83□□□□□ -1.8
CTNNA3Q9UI47 SAGE4P-201ENST00000442271 3381 ntBASIC3.83□□□□□ -1.8
CTNNA3Q9UI47 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CTNNA3Q9UI47 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CTNNA3Q9UI47 AC116096.1-201ENST00000566804 2314 ntBASIC3.82□□□□□ -1.8
CTNNA3Q9UI47 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
CTNNA3Q9UI47 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CTNNA3Q9UI47 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CTNNA3Q9UI47 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CTNNA3Q9UI47 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
CTNNA3Q9UI47 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
CTNNA3Q9UI47 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CTNNA3Q9UI47 TAF9BP2-201ENST00000400856 499 ntBASIC3.82□□□□□ -1.8
CTNNA3Q9UI47 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.82□□□□□ -1.8
CTNNA3Q9UI47 Z75741.1-201ENST00000446793 314 ntBASIC3.82□□□□□ -1.8
CTNNA3Q9UI47 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.82□□□□□ -1.8
CTNNA3Q9UI47 AC108078.3-201ENST00000502633 489 ntBASIC3.82□□□□□ -1.8
CTNNA3Q9UI47 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC3.82□□□□□ -1.8
CTNNA3Q9UI47 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.82□□□□□ -1.8
CTNNA3Q9UI47 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.82□□□□□ -1.8
CTNNA3Q9UI47 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.82□□□□□ -1.8
CTNNA3Q9UI47 AC067805.1-201ENST00000559344 470 ntBASIC3.82□□□□□ -1.8
CTNNA3Q9UI47 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.82□□□□□ -1.8
CTNNA3Q9UI47 MIR4474-201ENST00000579189 78 ntBASIC3.82□□□□□ -1.8
CTNNA3Q9UI47 AL137843.1-201ENST00000605078 385 ntBASIC3.82□□□□□ -1.8
CTNNA3Q9UI47 MIR7112-201ENST00000616126 65 ntBASIC3.82□□□□□ -1.8
CTNNA3Q9UI47 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.82□□□□□ -1.8
CTNNA3Q9UI47 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CTNNA3Q9UI47 AC004944.1-201ENST00000517807 3059 ntBASIC3.82□□□□□ -1.8
CTNNA3Q9UI47 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CTNNA3Q9UI47 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CTNNA3Q9UI47 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CTNNA3Q9UI47 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CTNNA3Q9UI47 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.82□□□□□ -1.8
CTNNA3Q9UI47 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
CTNNA3Q9UI47 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
CTNNA3Q9UI47 AL353743.1-202ENST00000431724 1695 ntBASIC3.81□□□□□ -1.8
CTNNA3Q9UI47 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.81□□□□□ -1.8
CTNNA3Q9UI47 OR1S2-201ENST00000302592 978 ntBASIC3.81□□□□□ -1.8
CTNNA3Q9UI47 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CTNNA3Q9UI47 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.81□□□□□ -1.8
CTNNA3Q9UI47 RNU6-629P-201ENST00000384061 103 ntBASIC3.81□□□□□ -1.8
CTNNA3Q9UI47 AL590623.1-201ENST00000427864 105 ntBASIC3.81□□□□□ -1.8
CTNNA3Q9UI47 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.81□□□□□ -1.8
CTNNA3Q9UI47 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.81□□□□□ -1.8
CTNNA3Q9UI47 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.81□□□□□ -1.8
CTNNA3Q9UI47 PTGES3P5-201ENST00000455109 434 ntBASIC3.81□□□□□ -1.8
CTNNA3Q9UI47 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.81□□□□□ -1.8
CTNNA3Q9UI47 ARPC3P2-201ENST00000457786 533 ntBASIC3.81□□□□□ -1.8
CTNNA3Q9UI47 AC109925.1-201ENST00000478069 331 ntBASIC3.81□□□□□ -1.8
CTNNA3Q9UI47 RN7SL283P-201ENST00000489055 303 ntBASIC3.81□□□□□ -1.8
CTNNA3Q9UI47 AL024509.2-201ENST00000493462 493 ntBASIC3.81□□□□□ -1.8
CTNNA3Q9UI47 KCTD9P5-201ENST00000504141 1170 ntBASIC3.81□□□□□ -1.8
CTNNA3Q9UI47 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.81□□□□□ -1.8
CTNNA3Q9UI47 MIR5680-201ENST00000577577 84 ntBASIC3.81□□□□□ -1.8
CTNNA3Q9UI47 LARP7P3-201ENST00000579888 337 ntBASIC3.81□□□□□ -1.8
CTNNA3Q9UI47 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.81□□□□□ -1.8
CTNNA3Q9UI47 AC125494.3-201ENST00000602759 455 ntBASIC3.81□□□□□ -1.8
CTNNA3Q9UI47 AL606834.2-201ENST00000602954 668 ntBASIC3.81□□□□□ -1.8
CTNNA3Q9UI47 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.81□□□□□ -1.8
CTNNA3Q9UI47 AL591516.1-201ENST00000611326 274 ntBASIC3.81□□□□□ -1.8
CTNNA3Q9UI47 uc_338.25-201ENST00000613756 156 ntBASIC3.81□□□□□ -1.8
CTNNA3Q9UI47 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC3.81□□□□□ -1.8
CTNNA3Q9UI47 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC3.81□□□□□ -1.8
CTNNA3Q9UI47 SNORA50A-202ENST00000629536 136 ntBASIC3.81□□□□□ -1.8
CTNNA3Q9UI47 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.81□□□□□ -1.8
CTNNA3Q9UI47 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CTNNA3Q9UI47 AL136164.4-201ENST00000625013 2135 ntBASIC3.8□□□□□ -1.8
CTNNA3Q9UI47 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.8□□□□□ -1.8
CTNNA3Q9UI47 RPL7P26-201ENST00000333817 754 ntBASIC3.8□□□□□ -1.8
CTNNA3Q9UI47 RNU6-50P-201ENST00000362356 103 ntBASIC3.8□□□□□ -1.8
CTNNA3Q9UI47 DEFB109C-201ENST00000382575 264 ntBASIC3.8□□□□□ -1.8
CTNNA3Q9UI47 DEFB109B-201ENST00000382656 264 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms