Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 AC092013.1-201ENST00000438795 332 ntBASIC3.2□□□□□ -1.9
SCN11AQ9UI33 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.2□□□□□ -1.9
SCN11AQ9UI33 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.2□□□□□ -1.9
SCN11AQ9UI33 RNA5SP458-201ENST00000516188 119 ntBASIC3.2□□□□□ -1.9
SCN11AQ9UI33 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.2□□□□□ -1.9
SCN11AQ9UI33 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
SCN11AQ9UI33 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.19□□□□□ -1.9
SCN11AQ9UI33 OR10AB1P-202ENST00000641219 1686 ntBASIC3.19□□□□□ -1.9
SCN11AQ9UI33 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SCN11AQ9UI33 Y_RNA.4-201ENST00000362333 112 ntBASIC3.19□□□□□ -1.9
SCN11AQ9UI33 SNORD114-30-201ENST00000364448 72 ntBASIC3.19□□□□□ -1.9
SCN11AQ9UI33 RNU6-482P-201ENST00000391068 107 ntBASIC3.19□□□□□ -1.9
SCN11AQ9UI33 EIF5P1-201ENST00000400019 1231 ntBASIC3.19□□□□□ -1.9
SCN11AQ9UI33 AL590290.1-201ENST00000405336 380 ntBASIC3.19□□□□□ -1.9
SCN11AQ9UI33 RNA5SP239-201ENST00000410218 129 ntBASIC3.19□□□□□ -1.9
SCN11AQ9UI33 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.19□□□□□ -1.9
SCN11AQ9UI33 AC133134.1-201ENST00000466800 359 ntBASIC3.19□□□□□ -1.9
SCN11AQ9UI33 RPL23AP45-201ENST00000476406 468 ntBASIC3.19□□□□□ -1.9
SCN11AQ9UI33 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
SCN11AQ9UI33 RPL23AP84-201ENST00000571193 464 ntBASIC3.19□□□□□ -1.9
SCN11AQ9UI33 MIR4648-201ENST00000580107 72 ntBASIC3.19□□□□□ -1.9
SCN11AQ9UI33 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.19□□□□□ -1.9
SCN11AQ9UI33 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SCN11AQ9UI33 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SCN11AQ9UI33 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
SCN11AQ9UI33 XIAPP3-201ENST00000312918 795 ntBASIC3.18□□□□□ -1.9
SCN11AQ9UI33 Y_RNA.238-201ENST00000364441 102 ntBASIC3.18□□□□□ -1.9
SCN11AQ9UI33 5S_rRNA.2-201ENST00000391293 112 ntBASIC3.18□□□□□ -1.9
SCN11AQ9UI33 AIMP1P1-201ENST00000418670 937 ntBASIC3.18□□□□□ -1.9
SCN11AQ9UI33 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC3.18□□□□□ -1.9
SCN11AQ9UI33 AC103975.1-201ENST00000482506 483 ntBASIC3.18□□□□□ -1.9
SCN11AQ9UI33 OR5H5P-201ENST00000503164 928 ntBASIC3.18□□□□□ -1.9
SCN11AQ9UI33 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC3.18□□□□□ -1.9
SCN11AQ9UI33 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC3.18□□□□□ -1.9
SCN11AQ9UI33 AL845331.3-202ENST00000562856 261 ntBASIC3.18□□□□□ -1.9
SCN11AQ9UI33 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.18□□□□□ -1.9
SCN11AQ9UI33 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC3.18□□□□□ -1.9
SCN11AQ9UI33 AC007938.3-201ENST00000604965 623 ntBASIC3.18□□□□□ -1.9
SCN11AQ9UI33 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
SCN11AQ9UI33 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.18□□□□□ -1.9
SCN11AQ9UI33 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
SCN11AQ9UI33 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SCN11AQ9UI33 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SCN11AQ9UI33 RNU4-26P-201ENST00000410270 107 ntBASIC3.17□□□□□ -1.9
SCN11AQ9UI33 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.17□□□□□ -1.9
SCN11AQ9UI33 RPL23AP62-201ENST00000463396 453 ntBASIC3.17□□□□□ -1.9
SCN11AQ9UI33 RPL23AP11-201ENST00000475260 469 ntBASIC3.17□□□□□ -1.9
SCN11AQ9UI33 AP000926.1-201ENST00000479573 241 ntBASIC3.17□□□□□ -1.9
SCN11AQ9UI33 RPL9P33-201ENST00000484311 566 ntBASIC3.17□□□□□ -1.9
SCN11AQ9UI33 AC034244.2-201ENST00000514668 858 ntBASIC3.17□□□□□ -1.9
SCN11AQ9UI33 SEC11B-201ENST00000518383 499 ntBASIC3.17□□□□□ -1.9
SCN11AQ9UI33 CKS1BP7-201ENST00000522230 235 ntBASIC3.17□□□□□ -1.9
SCN11AQ9UI33 OR4A45P-201ENST00000529954 901 ntBASIC3.17□□□□□ -1.9
SCN11AQ9UI33 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.17□□□□□ -1.9
SCN11AQ9UI33 AC010928.3-201ENST00000587712 541 ntBASIC3.17□□□□□ -1.9
SCN11AQ9UI33 AC010680.4-201ENST00000605334 543 ntBASIC3.17□□□□□ -1.9
SCN11AQ9UI33 AL450489.1-201ENST00000612071 468 ntBASIC3.17□□□□□ -1.9
SCN11AQ9UI33 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
SCN11AQ9UI33 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
SCN11AQ9UI33 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
SCN11AQ9UI33 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
SCN11AQ9UI33 RNU6-618P-201ENST00000363518 112 ntBASIC3.17□□□□□ -1.9
SCN11AQ9UI33 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.17□□□□□ -1.9
SCN11AQ9UI33 RNA5SP129-201ENST00000410276 118 ntBASIC3.17□□□□□ -1.9
SCN11AQ9UI33 AL590103.1-201ENST00000434488 307 ntBASIC3.17□□□□□ -1.9
SCN11AQ9UI33 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.17□□□□□ -1.9
SCN11AQ9UI33 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SCN11AQ9UI33 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.17□□□□□ -1.9
SCN11AQ9UI33 AC132942.1-201ENST00000486753 483 ntBASIC3.17□□□□□ -1.9
SCN11AQ9UI33 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.17□□□□□ -1.9
SCN11AQ9UI33 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.17□□□□□ -1.9
SCN11AQ9UI33 BNIP3P8-201ENST00000597863 560 ntBASIC3.17□□□□□ -1.9
SCN11AQ9UI33 AC007423.1-201ENST00000605009 627 ntBASIC3.17□□□□□ -1.9
SCN11AQ9UI33 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC3.17□□□□□ -1.9
SCN11AQ9UI33 AC090229.1-201ENST00000590983 1609 ntBASIC3.17□□□□□ -1.9
SCN11AQ9UI33 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SCN11AQ9UI33 SYT14P1-202ENST00000600441 1448 ntBASIC3.16□□□□□ -1.9
SCN11AQ9UI33 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
SCN11AQ9UI33 RNA5SP99-201ENST00000364020 114 ntBASIC3.16□□□□□ -1.9
SCN11AQ9UI33 Y_RNA.226-201ENST00000364337 114 ntBASIC3.16□□□□□ -1.9
SCN11AQ9UI33 VTA1P1-201ENST00000414044 866 ntBASIC3.16□□□□□ -1.9
SCN11AQ9UI33 TRGV5P-201ENST00000419915 354 ntBASIC3.16□□□□□ -1.9
SCN11AQ9UI33 VN1R17P-201ENST00000472048 1090 ntBASIC3.16□□□□□ -1.9
SCN11AQ9UI33 POU5F1P7-201ENST00000508759 541 ntBASIC3.16□□□□□ -1.9
SCN11AQ9UI33 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SCN11AQ9UI33 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
SCN11AQ9UI33 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC3.16□□□□□ -1.9
SCN11AQ9UI33 AC107871.2-201ENST00000612894 502 ntBASIC3.16□□□□□ -1.9
SCN11AQ9UI33 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
SCN11AQ9UI33 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.15□□□□□ -1.9
SCN11AQ9UI33 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC3.15□□□□□ -1.9
SCN11AQ9UI33 AL162578.1-201ENST00000406202 378 ntBASIC3.15□□□□□ -1.9
SCN11AQ9UI33 AL135786.1-201ENST00000415892 214 ntBASIC3.15□□□□□ -1.9
SCN11AQ9UI33 Z98742.3-201ENST00000418637 326 ntBASIC3.15□□□□□ -1.9
SCN11AQ9UI33 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC3.15□□□□□ -1.9
SCN11AQ9UI33 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.15□□□□□ -1.9
SCN11AQ9UI33 AP001207.1-201ENST00000524051 481 ntBASIC3.15□□□□□ -1.9
SCN11AQ9UI33 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3.15□□□□□ -1.9
SCN11AQ9UI33 CKS1BP1-201ENST00000555221 240 ntBASIC3.15□□□□□ -1.9
SCN11AQ9UI33 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms