Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.42□□□□□ -1.7
HDAC6Q9UBN7 LSM6P2-201ENST00000552208 177 ntBASIC4.42□□□□□ -1.7
HDAC6Q9UBN7 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC4.42□□□□□ -1.7
HDAC6Q9UBN7 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC4.42□□□□□ -1.7
HDAC6Q9UBN7 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.42□□□□□ -1.7
HDAC6Q9UBN7 Z99497.2-201ENST00000603634 310 ntBASIC4.42□□□□□ -1.7
HDAC6Q9UBN7 AC110741.2-201ENST00000605278 268 ntBASIC4.42□□□□□ -1.7
HDAC6Q9UBN7 AC006270.3-201ENST00000605967 1036 ntBASIC4.42□□□□□ -1.7
HDAC6Q9UBN7 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HDAC6Q9UBN7 AC079248.2-201ENST00000623779 326 ntBASIC4.42□□□□□ -1.7
HDAC6Q9UBN7 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.42□□□□□ -1.7
HDAC6Q9UBN7 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.42□□□□□ -1.7
HDAC6Q9UBN7 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HDAC6Q9UBN7 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.41□□□□□ -1.7
HDAC6Q9UBN7 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
HDAC6Q9UBN7 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.41□□□□□ -1.7
HDAC6Q9UBN7 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HDAC6Q9UBN7 ZNF285B-201ENST00000561698 1767 ntBASIC4.41□□□□□ -1.7
HDAC6Q9UBN7 RNA5SP399-201ENST00000364003 117 ntBASIC4.41□□□□□ -1.7
HDAC6Q9UBN7 RNU4-40P-201ENST00000364351 143 ntBASIC4.41□□□□□ -1.7
HDAC6Q9UBN7 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
HDAC6Q9UBN7 TRBV24OR9-2-201ENST00000416632 435 ntBASIC4.41□□□□□ -1.7
HDAC6Q9UBN7 NUP35P2-201ENST00000416748 943 ntBASIC4.41□□□□□ -1.7
HDAC6Q9UBN7 Z97055.1-201ENST00000419730 712 ntBASIC4.41□□□□□ -1.7
HDAC6Q9UBN7 PTP4A1P5-201ENST00000420305 455 ntBASIC4.41□□□□□ -1.7
HDAC6Q9UBN7 AL022400.1-201ENST00000423946 935 ntBASIC4.41□□□□□ -1.7
HDAC6Q9UBN7 SDCBPP2-201ENST00000424643 885 ntBASIC4.41□□□□□ -1.7
HDAC6Q9UBN7 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.41□□□□□ -1.7
HDAC6Q9UBN7 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC4.41□□□□□ -1.7
HDAC6Q9UBN7 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.41□□□□□ -1.7
HDAC6Q9UBN7 YWHAZP8-201ENST00000436935 731 ntBASIC4.41□□□□□ -1.7
HDAC6Q9UBN7 KATNBL1P3-201ENST00000443475 909 ntBASIC4.41□□□□□ -1.7
HDAC6Q9UBN7 NANOGP10-201ENST00000453325 895 ntBASIC4.41□□□□□ -1.7
HDAC6Q9UBN7 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC4.41□□□□□ -1.7
HDAC6Q9UBN7 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC4.41□□□□□ -1.7
HDAC6Q9UBN7 NAA50-206ENST00000493454 964 ntTSL 2 BASIC4.41□□□□□ -1.7
HDAC6Q9UBN7 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.41□□□□□ -1.7
HDAC6Q9UBN7 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC4.41□□□□□ -1.7
HDAC6Q9UBN7 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC4.41□□□□□ -1.7
HDAC6Q9UBN7 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.41□□□□□ -1.7
HDAC6Q9UBN7 IGKV2D-23-201ENST00000518179 286 ntBASIC4.41□□□□□ -1.7
HDAC6Q9UBN7 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.41□□□□□ -1.7
HDAC6Q9UBN7 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC4.41□□□□□ -1.7
HDAC6Q9UBN7 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.41□□□□□ -1.7
HDAC6Q9UBN7 AC092851.1-201ENST00000535964 478 ntBASIC4.41□□□□□ -1.7
HDAC6Q9UBN7 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.41□□□□□ -1.7
HDAC6Q9UBN7 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.41□□□□□ -1.7
HDAC6Q9UBN7 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC4.41□□□□□ -1.7
HDAC6Q9UBN7 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC4.41□□□□□ -1.7
HDAC6Q9UBN7 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.41□□□□□ -1.7
HDAC6Q9UBN7 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.41□□□□□ -1.7
HDAC6Q9UBN7 AC107016.1-201ENST00000550463 337 ntBASIC4.41□□□□□ -1.7
HDAC6Q9UBN7 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.41□□□□□ -1.7
HDAC6Q9UBN7 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.41□□□□□ -1.7
HDAC6Q9UBN7 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.41□□□□□ -1.7
HDAC6Q9UBN7 MTCYBP28-201ENST00000566728 1132 ntBASIC4.41□□□□□ -1.7
HDAC6Q9UBN7 AC090616.2-202ENST00000584248 222 ntBASIC4.41□□□□□ -1.7
HDAC6Q9UBN7 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HDAC6Q9UBN7 AC103881.1-201ENST00000603476 538 ntBASIC4.41□□□□□ -1.7
HDAC6Q9UBN7 AC121247.2-201ENST00000604776 136 ntBASIC4.41□□□□□ -1.7
HDAC6Q9UBN7 AC069304.2-201ENST00000605154 435 ntBASIC4.41□□□□□ -1.7
HDAC6Q9UBN7 HMGB1P50-201ENST00000605814 607 ntBASIC4.41□□□□□ -1.7
HDAC6Q9UBN7 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC4.41□□□□□ -1.7
HDAC6Q9UBN7 AC069200.1-201ENST00000609511 323 ntBASIC4.41□□□□□ -1.7
HDAC6Q9UBN7 AC068722.2-201ENST00000618734 544 ntBASIC4.41□□□□□ -1.7
HDAC6Q9UBN7 AC092650.2-201ENST00000619984 902 ntBASIC4.41□□□□□ -1.7
HDAC6Q9UBN7 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC4.41□□□□□ -1.7
HDAC6Q9UBN7 AL161912.2-201ENST00000565707 3007 ntBASIC4.41□□□□□ -1.7
HDAC6Q9UBN7 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
HDAC6Q9UBN7 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
HDAC6Q9UBN7 ZNF736P9Y-201ENST00000439586 1345 ntBASIC4.41□□□□□ -1.7
HDAC6Q9UBN7 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HDAC6Q9UBN7 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
HDAC6Q9UBN7 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HDAC6Q9UBN7 MTND4P34-201ENST00000572715 1371 ntBASIC4.4□□□□□ -1.7
HDAC6Q9UBN7 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
HDAC6Q9UBN7 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
HDAC6Q9UBN7 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
HDAC6Q9UBN7 FAM35DP-201ENST00000323387 2712 ntBASIC4.4□□□□□ -1.7
HDAC6Q9UBN7 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.4□□□□□ -1.7
HDAC6Q9UBN7 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
HDAC6Q9UBN7 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.4□□□□□ -1.7
HDAC6Q9UBN7 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
HDAC6Q9UBN7 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
HDAC6Q9UBN7 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HDAC6Q9UBN7 SNORD46.1-201ENST00000364139 104 ntBASIC4.4□□□□□ -1.71
HDAC6Q9UBN7 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HDAC6Q9UBN7 Y_RNA.408-201ENST00000383987 102 ntBASIC4.4□□□□□ -1.71
HDAC6Q9UBN7 RNU6-921P-201ENST00000384361 107 ntBASIC4.4□□□□□ -1.71
HDAC6Q9UBN7 RNU6-441P-201ENST00000384545 106 ntBASIC4.4□□□□□ -1.71
HDAC6Q9UBN7 MIR649-201ENST00000384843 97 ntBASIC4.4□□□□□ -1.71
HDAC6Q9UBN7 SNORA3.3-201ENST00000408712 125 ntBASIC4.4□□□□□ -1.71
HDAC6Q9UBN7 RNU2-28P-201ENST00000410457 189 ntBASIC4.4□□□□□ -1.71
HDAC6Q9UBN7 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.4□□□□□ -1.71
HDAC6Q9UBN7 CRYBB2P1-203ENST00000415709 538 ntBASIC4.4□□□□□ -1.71
HDAC6Q9UBN7 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC4.4□□□□□ -1.71
HDAC6Q9UBN7 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.4□□□□□ -1.71
HDAC6Q9UBN7 RPL30P3-201ENST00000424262 333 ntBASIC4.4□□□□□ -1.71
HDAC6Q9UBN7 NPM1P34-201ENST00000428821 893 ntBASIC4.4□□□□□ -1.71
HDAC6Q9UBN7 AL390023.1-201ENST00000428836 262 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms