Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC2.91□□□□□ -1.94
VAPAQ9P0L0 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC2.91□□□□□ -1.94
VAPAQ9P0L0 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC2.91□□□□□ -1.94
VAPAQ9P0L0 PRELID3BP5-201ENST00000508612 460 ntBASIC2.91□□□□□ -1.94
VAPAQ9P0L0 MTCO3P44-201ENST00000510977 541 ntBASIC2.91□□□□□ -1.94
VAPAQ9P0L0 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC2.91□□□□□ -1.94
VAPAQ9P0L0 AC104057.1-201ENST00000515547 497 ntBASIC2.91□□□□□ -1.94
VAPAQ9P0L0 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.91□□□□□ -1.94
VAPAQ9P0L0 AC012254.4-201ENST00000588843 273 ntBASIC2.91□□□□□ -1.94
VAPAQ9P0L0 CKS1BP3-201ENST00000600888 237 ntBASIC2.91□□□□□ -1.94
VAPAQ9P0L0 AC103881.1-201ENST00000603476 538 ntBASIC2.91□□□□□ -1.94
VAPAQ9P0L0 AC025588.3-201ENST00000604182 274 ntBASIC2.91□□□□□ -1.94
VAPAQ9P0L0 AC135178.6-201ENST00000605314 398 ntBASIC2.91□□□□□ -1.94
VAPAQ9P0L0 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC2.91□□□□□ -1.94
VAPAQ9P0L0 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
VAPAQ9P0L0 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
VAPAQ9P0L0 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC2.91□□□□□ -1.94
VAPAQ9P0L0 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.9□□□□□ -1.94
VAPAQ9P0L0 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.94
VAPAQ9P0L0 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
VAPAQ9P0L0 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.95
VAPAQ9P0L0 RNU6-1151P-201ENST00000384684 107 ntBASIC2.9□□□□□ -1.95
VAPAQ9P0L0 AL357075.1-201ENST00000404107 726 ntBASIC2.9□□□□□ -1.95
VAPAQ9P0L0 AL354719.1-201ENST00000406535 843 ntBASIC2.9□□□□□ -1.95
VAPAQ9P0L0 AL591034.1-201ENST00000407447 340 ntBASIC2.9□□□□□ -1.95
VAPAQ9P0L0 RNA5SP274-201ENST00000410484 108 ntBASIC2.9□□□□□ -1.95
VAPAQ9P0L0 UBE2V1P9-201ENST00000414760 368 ntBASIC2.9□□□□□ -1.95
VAPAQ9P0L0 YPEL5P1-201ENST00000419731 367 ntBASIC2.9□□□□□ -1.95
VAPAQ9P0L0 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.9□□□□□ -1.95
VAPAQ9P0L0 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.9□□□□□ -1.95
VAPAQ9P0L0 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC2.9□□□□□ -1.95
VAPAQ9P0L0 MTND3P4-201ENST00000453537 303 ntBASIC2.9□□□□□ -1.95
VAPAQ9P0L0 snoU13.4-201ENST00000458916 104 ntBASIC2.9□□□□□ -1.95
VAPAQ9P0L0 RPL21P41-201ENST00000459863 264 ntBASIC2.9□□□□□ -1.95
VAPAQ9P0L0 RN7SL542P-201ENST00000467147 294 ntBASIC2.9□□□□□ -1.95
VAPAQ9P0L0 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
VAPAQ9P0L0 HMGN2P13-201ENST00000476476 274 ntBASIC2.9□□□□□ -1.95
VAPAQ9P0L0 RN7SL633P-201ENST00000488974 297 ntBASIC2.9□□□□□ -1.95
VAPAQ9P0L0 ACTR3BP4-201ENST00000503033 1244 ntBASIC2.9□□□□□ -1.95
VAPAQ9P0L0 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
VAPAQ9P0L0 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
VAPAQ9P0L0 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.9□□□□□ -1.95
VAPAQ9P0L0 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.9□□□□□ -1.95
VAPAQ9P0L0 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
VAPAQ9P0L0 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.9□□□□□ -1.95
VAPAQ9P0L0 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.9□□□□□ -1.95
VAPAQ9P0L0 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC2.9□□□□□ -1.95
VAPAQ9P0L0 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.9□□□□□ -1.95
VAPAQ9P0L0 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC2.9□□□□□ -1.95
VAPAQ9P0L0 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.9□□□□□ -1.95
VAPAQ9P0L0 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.9□□□□□ -1.95
VAPAQ9P0L0 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC2.9□□□□□ -1.95
VAPAQ9P0L0 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.9□□□□□ -1.95
VAPAQ9P0L0 AC013468.1-201ENST00000608680 598 ntBASIC2.9□□□□□ -1.95
VAPAQ9P0L0 AC105227.2-201ENST00000615075 605 ntBASIC2.9□□□□□ -1.95
VAPAQ9P0L0 MIR1264-201ENST00000616374 69 ntBASIC2.9□□□□□ -1.95
VAPAQ9P0L0 FRG1HP-204ENST00000617940 757 ntBASIC2.9□□□□□ -1.95
VAPAQ9P0L0 TEX41-300ENST00000631048 69 ntTSL 5 BASIC2.9□□□□□ -1.95
VAPAQ9P0L0 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC2.9□□□□□ -1.95
VAPAQ9P0L0 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.95
VAPAQ9P0L0 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.95
VAPAQ9P0L0 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.9□□□□□ -1.95
VAPAQ9P0L0 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC2.89□□□□□ -1.95
VAPAQ9P0L0 AL049781.1-201ENST00000623195 3585 ntBASIC2.89□□□□□ -1.95
VAPAQ9P0L0 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
VAPAQ9P0L0 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
VAPAQ9P0L0 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
VAPAQ9P0L0 AC073325.2-201ENST00000339545 159 ntBASIC2.89□□□□□ -1.95
VAPAQ9P0L0 SNORA51.4-201ENST00000364993 124 ntBASIC2.89□□□□□ -1.95
VAPAQ9P0L0 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
VAPAQ9P0L0 RNU6-444P-201ENST00000383988 108 ntBASIC2.89□□□□□ -1.95
VAPAQ9P0L0 SNORD67-201ENST00000390833 111 ntBASIC2.89□□□□□ -1.95
VAPAQ9P0L0 ATP5F1P6-201ENST00000402768 767 ntBASIC2.89□□□□□ -1.95
VAPAQ9P0L0 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.89□□□□□ -1.95
VAPAQ9P0L0 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.89□□□□□ -1.95
VAPAQ9P0L0 RN7SKP58-201ENST00000411010 305 ntBASIC2.89□□□□□ -1.95
VAPAQ9P0L0 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC2.89□□□□□ -1.95
VAPAQ9P0L0 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.89□□□□□ -1.95
VAPAQ9P0L0 AC008280.1-201ENST00000418851 412 ntBASIC2.89□□□□□ -1.95
VAPAQ9P0L0 PAICSP7-201ENST00000419829 962 ntBASIC2.89□□□□□ -1.95
VAPAQ9P0L0 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.89□□□□□ -1.95
VAPAQ9P0L0 SETP8-201ENST00000435341 628 ntBASIC2.89□□□□□ -1.95
VAPAQ9P0L0 MTND5P8-201ENST00000449817 1083 ntBASIC2.89□□□□□ -1.95
VAPAQ9P0L0 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC2.89□□□□□ -1.95
VAPAQ9P0L0 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC2.89□□□□□ -1.95
VAPAQ9P0L0 RPL21P10-201ENST00000463521 490 ntBASIC2.89□□□□□ -1.95
VAPAQ9P0L0 AC010301.1-201ENST00000473936 355 ntBASIC2.89□□□□□ -1.95
VAPAQ9P0L0 RPL7P23-201ENST00000493874 747 ntBASIC2.89□□□□□ -1.95
VAPAQ9P0L0 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.89□□□□□ -1.95
VAPAQ9P0L0 PTK2-220ENST00000520151 573 ntTSL 4 BASIC2.89□□□□□ -1.95
VAPAQ9P0L0 AC022784.5-201ENST00000522241 437 ntBASIC2.89□□□□□ -1.95
VAPAQ9P0L0 AC019227.1-201ENST00000526902 510 ntBASIC2.89□□□□□ -1.95
VAPAQ9P0L0 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC2.89□□□□□ -1.95
VAPAQ9P0L0 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.89□□□□□ -1.95
VAPAQ9P0L0 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC2.89□□□□□ -1.95
VAPAQ9P0L0 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC2.89□□□□□ -1.95
VAPAQ9P0L0 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC2.89□□□□□ -1.95
VAPAQ9P0L0 AC233266.2-201ENST00000567067 528 ntBASIC2.89□□□□□ -1.95
VAPAQ9P0L0 ATP5F1P7-201ENST00000567330 760 ntBASIC2.89□□□□□ -1.95
VAPAQ9P0L0 AC010653.1-201ENST00000571108 881 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms