Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC1.54□□□□□ -2.16
CDC42SE1Q9NRR8 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.54□□□□□ -2.16
CDC42SE1Q9NRR8 AL139128.1-201ENST00000413921 941 ntBASIC1.54□□□□□ -2.16
CDC42SE1Q9NRR8 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC1.54□□□□□ -2.16
CDC42SE1Q9NRR8 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
CDC42SE1Q9NRR8 AC012497.1-201ENST00000429392 575 ntBASIC1.54□□□□□ -2.16
CDC42SE1Q9NRR8 RPL31P54-201ENST00000429803 370 ntBASIC1.54□□□□□ -2.16
CDC42SE1Q9NRR8 AL645931.1-201ENST00000439737 410 ntBASIC1.54□□□□□ -2.16
CDC42SE1Q9NRR8 AL445687.1-201ENST00000439946 251 ntBASIC1.54□□□□□ -2.16
CDC42SE1Q9NRR8 AC009296.1-201ENST00000443146 155 ntBASIC1.54□□□□□ -2.16
CDC42SE1Q9NRR8 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC1.54□□□□□ -2.16
CDC42SE1Q9NRR8 CCNB1IP1P3-201ENST00000454702 829 ntBASIC1.54□□□□□ -2.16
CDC42SE1Q9NRR8 RPS20P24-201ENST00000457473 361 ntBASIC1.54□□□□□ -2.16
CDC42SE1Q9NRR8 OR2A1-AS1-202ENST00000467944 422 ntBASIC1.54□□□□□ -2.16
CDC42SE1Q9NRR8 RN7SL798P-201ENST00000468562 301 ntBASIC1.54□□□□□ -2.16
CDC42SE1Q9NRR8 AC092324.1-201ENST00000468671 324 ntBASIC1.54□□□□□ -2.16
CDC42SE1Q9NRR8 AL135752.1-201ENST00000479477 471 ntBASIC1.54□□□□□ -2.16
CDC42SE1Q9NRR8 RPS3AP43-201ENST00000479743 781 ntBASIC1.54□□□□□ -2.16
CDC42SE1Q9NRR8 AC108734.3-201ENST00000481241 1165 ntBASIC1.54□□□□□ -2.16
CDC42SE1Q9NRR8 AC008427.1-201ENST00000503102 655 ntBASIC1.54□□□□□ -2.16
CDC42SE1Q9NRR8 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC1.54□□□□□ -2.16
CDC42SE1Q9NRR8 SNORA9.3-201ENST00000516383 129 ntBASIC1.54□□□□□ -2.16
CDC42SE1Q9NRR8 PAICSP4-201ENST00000517543 1253 ntBASIC1.54□□□□□ -2.16
CDC42SE1Q9NRR8 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC1.54□□□□□ -2.16
CDC42SE1Q9NRR8 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC1.54□□□□□ -2.16
CDC42SE1Q9NRR8 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC1.54□□□□□ -2.16
CDC42SE1Q9NRR8 CASP1P1-201ENST00000526345 212 ntBASIC1.54□□□□□ -2.16
CDC42SE1Q9NRR8 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC1.54□□□□□ -2.16
CDC42SE1Q9NRR8 YPEL5P3-201ENST00000547227 352 ntBASIC1.54□□□□□ -2.16
CDC42SE1Q9NRR8 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
CDC42SE1Q9NRR8 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC1.54□□□□□ -2.16
CDC42SE1Q9NRR8 EEF1B2P4-201ENST00000551398 348 ntBASIC1.54□□□□□ -2.16
CDC42SE1Q9NRR8 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC1.54□□□□□ -2.16
CDC42SE1Q9NRR8 SNORD53-201ENST00000579969 78 ntBASIC1.54□□□□□ -2.16
CDC42SE1Q9NRR8 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC1.54□□□□□ -2.16
CDC42SE1Q9NRR8 MIR4266-201ENST00000583300 55 ntBASIC1.54□□□□□ -2.16
CDC42SE1Q9NRR8 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC1.54□□□□□ -2.16
CDC42SE1Q9NRR8 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC1.54□□□□□ -2.16
CDC42SE1Q9NRR8 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC1.54□□□□□ -2.16
CDC42SE1Q9NRR8 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC1.54□□□□□ -2.16
CDC42SE1Q9NRR8 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC1.54□□□□□ -2.16
CDC42SE1Q9NRR8 AL020997.3-201ENST00000602843 359 ntBASIC1.54□□□□□ -2.16
CDC42SE1Q9NRR8 NRBF2P5-201ENST00000603087 788 ntBASIC1.54□□□□□ -2.16
CDC42SE1Q9NRR8 BNIP3P4-201ENST00000604946 565 ntBASIC1.54□□□□□ -2.16
CDC42SE1Q9NRR8 AC126915.2-201ENST00000610957 190 ntBASIC1.54□□□□□ -2.16
CDC42SE1Q9NRR8 MIR6868-201ENST00000611215 58 ntBASIC1.54□□□□□ -2.16
CDC42SE1Q9NRR8 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
CDC42SE1Q9NRR8 AC105227.2-201ENST00000615075 605 ntBASIC1.54□□□□□ -2.16
CDC42SE1Q9NRR8 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC1.54□□□□□ -2.16
CDC42SE1Q9NRR8 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC1.54□□□□□ -2.16
CDC42SE1Q9NRR8 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC1.54□□□□□ -2.16
CDC42SE1Q9NRR8 MIR203B-201ENST00000636080 86 ntBASIC1.54□□□□□ -2.16
CDC42SE1Q9NRR8 AL590396.2-201ENST00000636511 1041 ntBASIC1.54□□□□□ -2.16
CDC42SE1Q9NRR8 CASC19-274ENST00000642018 970 ntBASIC1.54□□□□□ -2.16
CDC42SE1Q9NRR8 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
CDC42SE1Q9NRR8 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.54□□□□□ -2.16
CDC42SE1Q9NRR8 ZNF658B-202ENST00000615961 3375 ntBASIC1.54□□□□□ -2.16
CDC42SE1Q9NRR8 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
CDC42SE1Q9NRR8 AC087359.1-201ENST00000508335 1740 ntBASIC1.54□□□□□ -2.16
CDC42SE1Q9NRR8 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
CDC42SE1Q9NRR8 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC1.54□□□□□ -2.16
CDC42SE1Q9NRR8 AC009902.3-201ENST00000606235 2172 ntBASIC1.54□□□□□ -2.16
CDC42SE1Q9NRR8 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
CDC42SE1Q9NRR8 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC1.53□□□□□ -2.16
CDC42SE1Q9NRR8 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
CDC42SE1Q9NRR8 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
CDC42SE1Q9NRR8 ATXN3-201ENST00000340660 1205 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
CDC42SE1Q9NRR8 AC023490.2-201ENST00000359859 470 ntBASIC1.53□□□□□ -2.16
CDC42SE1Q9NRR8 RN7SKP149-201ENST00000363008 344 ntBASIC1.53□□□□□ -2.16
CDC42SE1Q9NRR8 RN7SKP257-201ENST00000364525 309 ntBASIC1.53□□□□□ -2.16
CDC42SE1Q9NRR8 SNORD51.1-201ENST00000365405 77 ntBASIC1.53□□□□□ -2.16
CDC42SE1Q9NRR8 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
CDC42SE1Q9NRR8 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
CDC42SE1Q9NRR8 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
CDC42SE1Q9NRR8 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC1.53□□□□□ -2.16
CDC42SE1Q9NRR8 AL513475.1-201ENST00000406602 315 ntBASIC1.53□□□□□ -2.16
CDC42SE1Q9NRR8 U3.36-201ENST00000408418 213 ntBASIC1.53□□□□□ -2.16
CDC42SE1Q9NRR8 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.53□□□□□ -2.16
CDC42SE1Q9NRR8 U3.40-201ENST00000408706 208 ntBASIC1.53□□□□□ -2.16
CDC42SE1Q9NRR8 ZNF736P2Y-201ENST00000416040 1279 ntBASIC1.53□□□□□ -2.16
CDC42SE1Q9NRR8 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC1.53□□□□□ -2.16
CDC42SE1Q9NRR8 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC1.53□□□□□ -2.16
CDC42SE1Q9NRR8 MTND4P24-201ENST00000424002 397 ntBASIC1.53□□□□□ -2.16
CDC42SE1Q9NRR8 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC1.53□□□□□ -2.16
CDC42SE1Q9NRR8 AL009174.1-201ENST00000426577 416 ntBASIC1.53□□□□□ -2.16
CDC42SE1Q9NRR8 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC1.53□□□□□ -2.16
CDC42SE1Q9NRR8 YY1P1-201ENST00000427625 668 ntBASIC1.53□□□□□ -2.16
CDC42SE1Q9NRR8 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC1.53□□□□□ -2.16
CDC42SE1Q9NRR8 AL139132.1-201ENST00000431587 344 ntBASIC1.53□□□□□ -2.16
CDC42SE1Q9NRR8 OR4K11P-201ENST00000431829 904 ntBASIC1.53□□□□□ -2.16
CDC42SE1Q9NRR8 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC1.53□□□□□ -2.16
CDC42SE1Q9NRR8 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC1.53□□□□□ -2.16
CDC42SE1Q9NRR8 RRM2P4-201ENST00000441721 562 ntBASIC1.53□□□□□ -2.16
CDC42SE1Q9NRR8 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC1.53□□□□□ -2.16
CDC42SE1Q9NRR8 MRPL50P4-201ENST00000446432 475 ntBASIC1.53□□□□□ -2.16
CDC42SE1Q9NRR8 AL031659.1-201ENST00000447075 539 ntBASIC1.53□□□□□ -2.16
CDC42SE1Q9NRR8 CYCSP42-201ENST00000450823 238 ntBASIC1.53□□□□□ -2.16
CDC42SE1Q9NRR8 RPS11P1-201ENST00000451072 473 ntBASIC1.53□□□□□ -2.16
CDC42SE1Q9NRR8 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC1.53□□□□□ -2.16
CDC42SE1Q9NRR8 RPL23AP23-201ENST00000452590 471 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms