Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC3.77□□□□□ -1.81
SIX2Q9NPC8 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.77□□□□□ -1.81
SIX2Q9NPC8 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC3.77□□□□□ -1.81
SIX2Q9NPC8 PIGPP4-201ENST00000584447 307 ntBASIC3.77□□□□□ -1.81
SIX2Q9NPC8 AC017100.2-201ENST00000584628 355 ntBASIC3.77□□□□□ -1.81
SIX2Q9NPC8 AC010620.1-201ENST00000601088 1102 ntBASIC3.77□□□□□ -1.81
SIX2Q9NPC8 AC121247.2-201ENST00000604776 136 ntBASIC3.77□□□□□ -1.81
SIX2Q9NPC8 AC116447.1-201ENST00000613153 453 ntBASIC3.77□□□□□ -1.81
SIX2Q9NPC8 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
SIX2Q9NPC8 AP001005.3-201ENST00000622049 129 ntBASIC3.77□□□□□ -1.81
SIX2Q9NPC8 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SIX2Q9NPC8 AC079248.2-201ENST00000623779 326 ntBASIC3.77□□□□□ -1.81
SIX2Q9NPC8 AC004943.3-201ENST00000624116 600 ntBASIC3.77□□□□□ -1.81
SIX2Q9NPC8 MKKS-204ENST00000639674 192 ntBASIC3.77□□□□□ -1.81
SIX2Q9NPC8 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
SIX2Q9NPC8 OTUD4P1-201ENST00000237841 3067 ntBASIC3.77□□□□□ -1.81
SIX2Q9NPC8 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SIX2Q9NPC8 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SIX2Q9NPC8 AC090337.1-201ENST00000579651 2074 ntBASIC3.77□□□□□ -1.81
SIX2Q9NPC8 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SIX2Q9NPC8 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SIX2Q9NPC8 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.76□□□□□ -1.81
SIX2Q9NPC8 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.76□□□□□ -1.81
SIX2Q9NPC8 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SIX2Q9NPC8 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SIX2Q9NPC8 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
SIX2Q9NPC8 AC016716.1-201ENST00000265882 708 ntBASIC3.76□□□□□ -1.81
SIX2Q9NPC8 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SIX2Q9NPC8 Y_RNA.311-201ENST00000365068 96 ntBASIC3.76□□□□□ -1.81
SIX2Q9NPC8 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
SIX2Q9NPC8 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.76□□□□□ -1.81
SIX2Q9NPC8 AL590084.2-201ENST00000401481 382 ntBASIC3.76□□□□□ -1.81
SIX2Q9NPC8 RN7SKP159-201ENST00000410657 292 ntBASIC3.76□□□□□ -1.81
SIX2Q9NPC8 RNU6-603P-201ENST00000411403 107 ntBASIC3.76□□□□□ -1.81
SIX2Q9NPC8 AL136133.1-201ENST00000413694 376 ntBASIC3.76□□□□□ -1.81
SIX2Q9NPC8 AC009302.1-201ENST00000417147 390 ntBASIC3.76□□□□□ -1.81
SIX2Q9NPC8 AC234781.2-201ENST00000426370 994 ntBASIC3.76□□□□□ -1.81
SIX2Q9NPC8 AP000907.1-201ENST00000428428 510 ntBASIC3.76□□□□□ -1.81
SIX2Q9NPC8 CYCSP4-201ENST00000429682 331 ntBASIC3.76□□□□□ -1.81
SIX2Q9NPC8 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC3.76□□□□□ -1.81
SIX2Q9NPC8 AL513175.1-201ENST00000431492 780 ntBASIC3.76□□□□□ -1.81
SIX2Q9NPC8 RPL37P1-201ENST00000432310 284 ntBASIC3.76□□□□□ -1.81
SIX2Q9NPC8 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.76□□□□□ -1.81
SIX2Q9NPC8 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SIX2Q9NPC8 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC3.76□□□□□ -1.81
SIX2Q9NPC8 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SIX2Q9NPC8 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SIX2Q9NPC8 RPL12P26-201ENST00000452430 487 ntBASIC3.76□□□□□ -1.81
SIX2Q9NPC8 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC3.76□□□□□ -1.81
SIX2Q9NPC8 RNU7-125P-201ENST00000458760 62 ntBASIC3.76□□□□□ -1.81
SIX2Q9NPC8 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.76□□□□□ -1.81
SIX2Q9NPC8 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.76□□□□□ -1.81
SIX2Q9NPC8 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
SIX2Q9NPC8 AC021205.2-201ENST00000480069 347 ntBASIC3.76□□□□□ -1.81
SIX2Q9NPC8 LINC00888-204ENST00000487386 421 ntBASIC3.76□□□□□ -1.81
SIX2Q9NPC8 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.76□□□□□ -1.81
SIX2Q9NPC8 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.76□□□□□ -1.81
SIX2Q9NPC8 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.76□□□□□ -1.81
SIX2Q9NPC8 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC3.76□□□□□ -1.81
SIX2Q9NPC8 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.76□□□□□ -1.81
SIX2Q9NPC8 AC125611.1-201ENST00000549563 229 ntBASIC3.76□□□□□ -1.81
SIX2Q9NPC8 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.76□□□□□ -1.81
SIX2Q9NPC8 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.76□□□□□ -1.81
SIX2Q9NPC8 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC3.76□□□□□ -1.81
SIX2Q9NPC8 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.76□□□□□ -1.81
SIX2Q9NPC8 TGIF1P1-201ENST00000558095 802 ntBASIC3.76□□□□□ -1.81
SIX2Q9NPC8 AC106785.1-201ENST00000565935 262 ntBASIC3.76□□□□□ -1.81
SIX2Q9NPC8 AC093519.1-201ENST00000566109 298 ntBASIC3.76□□□□□ -1.81
SIX2Q9NPC8 AC135628.1-201ENST00000568867 534 ntBASIC3.76□□□□□ -1.81
SIX2Q9NPC8 AC022069.1-201ENST00000582910 658 ntBASIC3.76□□□□□ -1.81
SIX2Q9NPC8 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.76□□□□□ -1.81
SIX2Q9NPC8 MIR4999-201ENST00000585029 91 ntBASIC3.76□□□□□ -1.81
SIX2Q9NPC8 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC3.76□□□□□ -1.81
SIX2Q9NPC8 AL365503.1-201ENST00000605247 905 ntBASIC3.76□□□□□ -1.81
SIX2Q9NPC8 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC3.76□□□□□ -1.81
SIX2Q9NPC8 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.76□□□□□ -1.81
SIX2Q9NPC8 AC064807.4-201ENST00000607201 407 ntBASIC3.76□□□□□ -1.81
SIX2Q9NPC8 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.76□□□□□ -1.81
SIX2Q9NPC8 AC005332.6-201ENST00000613178 446 ntBASIC3.76□□□□□ -1.81
SIX2Q9NPC8 AC123768.4-201ENST00000616244 701 ntBASIC3.76□□□□□ -1.81
SIX2Q9NPC8 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
SIX2Q9NPC8 AL118496.1-201ENST00000440201 1812 ntBASIC3.76□□□□□ -1.81
SIX2Q9NPC8 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SIX2Q9NPC8 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SIX2Q9NPC8 ZNF285B-201ENST00000561698 1767 ntBASIC3.76□□□□□ -1.81
SIX2Q9NPC8 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
SIX2Q9NPC8 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
SIX2Q9NPC8 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.75□□□□□ -1.81
SIX2Q9NPC8 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
SIX2Q9NPC8 AL391994.1-201ENST00000254724 282 ntBASIC3.75□□□□□ -1.81
SIX2Q9NPC8 RNU6-492P-201ENST00000363035 104 ntBASIC3.75□□□□□ -1.81
SIX2Q9NPC8 RNU6-931P-201ENST00000363850 107 ntBASIC3.75□□□□□ -1.81
SIX2Q9NPC8 RNU6-115P-201ENST00000364310 107 ntBASIC3.75□□□□□ -1.81
SIX2Q9NPC8 SNORD116-1-201ENST00000384335 95 ntBASIC3.75□□□□□ -1.81
SIX2Q9NPC8 MIR708-201ENST00000390708 88 ntBASIC3.75□□□□□ -1.81
SIX2Q9NPC8 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SIX2Q9NPC8 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
SIX2Q9NPC8 AL590704.1-201ENST00000402856 794 ntBASIC3.75□□□□□ -1.81
SIX2Q9NPC8 RAB9AP3-201ENST00000412737 573 ntBASIC3.75□□□□□ -1.81
SIX2Q9NPC8 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms