Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 AC108064.1-201ENST00000513791 460 ntBASIC4□□□□□ -1.77
PCDH9Q9HC56 RNA5SP179-201ENST00000517284 121 ntBASIC4□□□□□ -1.77
PCDH9Q9HC56 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4□□□□□ -1.77
PCDH9Q9HC56 SLC2A13P1-201ENST00000531560 322 ntBASIC4□□□□□ -1.77
PCDH9Q9HC56 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4□□□□□ -1.77
PCDH9Q9HC56 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4□□□□□ -1.77
PCDH9Q9HC56 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC4□□□□□ -1.77
PCDH9Q9HC56 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4□□□□□ -1.77
PCDH9Q9HC56 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4□□□□□ -1.77
PCDH9Q9HC56 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC4□□□□□ -1.77
PCDH9Q9HC56 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC4□□□□□ -1.77
PCDH9Q9HC56 AC074051.3-201ENST00000570238 358 ntBASIC4□□□□□ -1.77
PCDH9Q9HC56 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4□□□□□ -1.77
PCDH9Q9HC56 AP000811.1-201ENST00000603803 651 ntBASIC4□□□□□ -1.77
PCDH9Q9HC56 AC115621.1-201ENST00000604653 858 ntBASIC4□□□□□ -1.77
PCDH9Q9HC56 AC018714.1-201ENST00000605028 208 ntBASIC4□□□□□ -1.77
PCDH9Q9HC56 AC091167.4-201ENST00000605079 184 ntBASIC4□□□□□ -1.77
PCDH9Q9HC56 AC010680.4-201ENST00000605334 543 ntBASIC4□□□□□ -1.77
PCDH9Q9HC56 AC112220.3-201ENST00000605502 502 ntBASIC4□□□□□ -1.77
PCDH9Q9HC56 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4□□□□□ -1.77
PCDH9Q9HC56 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4□□□□□ -1.77
PCDH9Q9HC56 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC4□□□□□ -1.77
PCDH9Q9HC56 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC4□□□□□ -1.77
PCDH9Q9HC56 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
PCDH9Q9HC56 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4□□□□□ -1.77
PCDH9Q9HC56 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC4□□□□□ -1.77
PCDH9Q9HC56 AC091905.1-201ENST00000624400 311 ntBASIC4□□□□□ -1.77
PCDH9Q9HC56 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4□□□□□ -1.77
PCDH9Q9HC56 AC068137.4-201ENST00000638485 296 ntBASIC4□□□□□ -1.77
PCDH9Q9HC56 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
PCDH9Q9HC56 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4□□□□□ -1.77
PCDH9Q9HC56 XPOTP1-201ENST00000443317 2398 ntBASIC4□□□□□ -1.77
PCDH9Q9HC56 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PCDH9Q9HC56 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
PCDH9Q9HC56 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PCDH9Q9HC56 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
PCDH9Q9HC56 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4□□□□□ -1.77
PCDH9Q9HC56 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4□□□□□ -1.77
PCDH9Q9HC56 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PCDH9Q9HC56 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
PCDH9Q9HC56 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.99□□□□□ -1.77
PCDH9Q9HC56 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
PCDH9Q9HC56 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.99□□□□□ -1.77
PCDH9Q9HC56 AP002001.2-201ENST00000529025 1469 ntBASIC3.99□□□□□ -1.77
PCDH9Q9HC56 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.99□□□□□ -1.77
PCDH9Q9HC56 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.99□□□□□ -1.77
PCDH9Q9HC56 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
PCDH9Q9HC56 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PCDH9Q9HC56 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
PCDH9Q9HC56 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
PCDH9Q9HC56 RN7SKP227-201ENST00000364445 330 ntBASIC3.99□□□□□ -1.77
PCDH9Q9HC56 RNA5SP283-201ENST00000365604 119 ntBASIC3.99□□□□□ -1.77
PCDH9Q9HC56 RNU6-1293P-201ENST00000384077 107 ntBASIC3.99□□□□□ -1.77
PCDH9Q9HC56 MIR199A2-201ENST00000385289 110 ntBASIC3.99□□□□□ -1.77
PCDH9Q9HC56 SNRPEP2-201ENST00000397592 279 ntBASIC3.99□□□□□ -1.77
PCDH9Q9HC56 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.99□□□□□ -1.77
PCDH9Q9HC56 RNU6-920P-201ENST00000410926 92 ntBASIC3.99□□□□□ -1.77
PCDH9Q9HC56 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC3.99□□□□□ -1.77
PCDH9Q9HC56 RPL21P109-201ENST00000422213 475 ntBASIC3.99□□□□□ -1.77
PCDH9Q9HC56 AC092832.1-201ENST00000422934 400 ntBASIC3.99□□□□□ -1.77
PCDH9Q9HC56 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.99□□□□□ -1.77
PCDH9Q9HC56 VN1R108P-201ENST00000431580 830 ntBASIC3.99□□□□□ -1.77
PCDH9Q9HC56 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.99□□□□□ -1.77
PCDH9Q9HC56 AC105402.2-201ENST00000438503 358 ntBASIC3.99□□□□□ -1.77
PCDH9Q9HC56 ISCA1P2-201ENST00000438679 421 ntBASIC3.99□□□□□ -1.77
PCDH9Q9HC56 RPL21P89-201ENST00000444021 467 ntBASIC3.99□□□□□ -1.77
PCDH9Q9HC56 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.99□□□□□ -1.77
PCDH9Q9HC56 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.99□□□□□ -1.77
PCDH9Q9HC56 AC097262.1-201ENST00000452559 548 ntBASIC3.99□□□□□ -1.77
PCDH9Q9HC56 DNAJC19P1-201ENST00000455312 319 ntBASIC3.99□□□□□ -1.77
PCDH9Q9HC56 AC010301.1-201ENST00000473936 355 ntBASIC3.99□□□□□ -1.77
PCDH9Q9HC56 AC087385.1-201ENST00000475062 312 ntBASIC3.99□□□□□ -1.77
PCDH9Q9HC56 AC084198.1-201ENST00000477747 402 ntBASIC3.99□□□□□ -1.77
PCDH9Q9HC56 AC106872.2-201ENST00000494303 480 ntBASIC3.99□□□□□ -1.77
PCDH9Q9HC56 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.99□□□□□ -1.77
PCDH9Q9HC56 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.99□□□□□ -1.77
PCDH9Q9HC56 FTH1P21-201ENST00000512179 511 ntBASIC3.99□□□□□ -1.77
PCDH9Q9HC56 MTND5P13-201ENST00000513046 1079 ntBASIC3.99□□□□□ -1.77
PCDH9Q9HC56 MIR2114-201ENST00000516645 80 ntBASIC3.99□□□□□ -1.77
PCDH9Q9HC56 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.99□□□□□ -1.77
PCDH9Q9HC56 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.99□□□□□ -1.77
PCDH9Q9HC56 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.99□□□□□ -1.77
PCDH9Q9HC56 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.99□□□□□ -1.77
PCDH9Q9HC56 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.99□□□□□ -1.77
PCDH9Q9HC56 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.99□□□□□ -1.77
PCDH9Q9HC56 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.99□□□□□ -1.77
PCDH9Q9HC56 AGGF1P8-201ENST00000562979 1000 ntBASIC3.99□□□□□ -1.77
PCDH9Q9HC56 MIR4504-201ENST00000577413 92 ntBASIC3.99□□□□□ -1.77
PCDH9Q9HC56 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.99□□□□□ -1.77
PCDH9Q9HC56 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.99□□□□□ -1.77
PCDH9Q9HC56 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.99□□□□□ -1.77
PCDH9Q9HC56 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.99□□□□□ -1.77
PCDH9Q9HC56 AL590229.1-201ENST00000603497 542 ntBASIC3.99□□□□□ -1.77
PCDH9Q9HC56 AP001521.1-201ENST00000609150 300 ntBASIC3.99□□□□□ -1.77
PCDH9Q9HC56 AC092650.2-201ENST00000619984 902 ntBASIC3.99□□□□□ -1.77
PCDH9Q9HC56 RNU6-156P-201ENST00000621869 107 ntBASIC3.99□□□□□ -1.77
PCDH9Q9HC56 MIR6500-201ENST00000622700 86 ntBASIC3.99□□□□□ -1.77
PCDH9Q9HC56 AC244205.2-202ENST00000635781 342 ntBASIC3.99□□□□□ -1.77
PCDH9Q9HC56 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.99□□□□□ -1.77
PCDH9Q9HC56 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms