Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SEC61A2Q9H9S3 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.63□□□□□ -1.67
SEC61A2Q9H9S3 SMG1P7-201ENST00000565246 2704 ntBASIC4.63□□□□□ -1.67
SEC61A2Q9H9S3 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.63□□□□□ -1.67
SEC61A2Q9H9S3 AC097504.1-201ENST00000515103 2415 ntBASIC4.63□□□□□ -1.67
SEC61A2Q9H9S3 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
SEC61A2Q9H9S3 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SEC61A2Q9H9S3 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SEC61A2Q9H9S3 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SEC61A2Q9H9S3 VPS35P1-201ENST00000563400 1518 ntBASIC4.62□□□□□ -1.67
SEC61A2Q9H9S3 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
SEC61A2Q9H9S3 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
SEC61A2Q9H9S3 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
SEC61A2Q9H9S3 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.62□□□□□ -1.67
SEC61A2Q9H9S3 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
SEC61A2Q9H9S3 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SEC61A2Q9H9S3 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SEC61A2Q9H9S3 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
SEC61A2Q9H9S3 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
SEC61A2Q9H9S3 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
SEC61A2Q9H9S3 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
SEC61A2Q9H9S3 Y_RNA.255-201ENST00000364581 97 ntBASIC4.62□□□□□ -1.67
SEC61A2Q9H9S3 RNU1-43P-201ENST00000365052 165 ntBASIC4.62□□□□□ -1.67
SEC61A2Q9H9S3 SNORA51.6-201ENST00000384151 125 ntBASIC4.62□□□□□ -1.67
SEC61A2Q9H9S3 RNU6-474P-201ENST00000384243 107 ntBASIC4.62□□□□□ -1.67
SEC61A2Q9H9S3 SNORA67-201ENST00000384423 137 ntBASIC4.62□□□□□ -1.67
SEC61A2Q9H9S3 MIR649-201ENST00000384843 97 ntBASIC4.62□□□□□ -1.67
SEC61A2Q9H9S3 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
SEC61A2Q9H9S3 SNORD37.1-201ENST00000390968 65 ntBASIC4.62□□□□□ -1.67
SEC61A2Q9H9S3 DSTNP4-201ENST00000399472 474 ntBASIC4.62□□□□□ -1.67
SEC61A2Q9H9S3 HMGB3P7-201ENST00000400214 611 ntBASIC4.62□□□□□ -1.67
SEC61A2Q9H9S3 Y_RNA.615-201ENST00000410769 117 ntBASIC4.62□□□□□ -1.67
SEC61A2Q9H9S3 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.62□□□□□ -1.67
SEC61A2Q9H9S3 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SEC61A2Q9H9S3 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SEC61A2Q9H9S3 MTCYBP8-201ENST00000422855 651 ntBASIC4.62□□□□□ -1.67
SEC61A2Q9H9S3 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.62□□□□□ -1.67
SEC61A2Q9H9S3 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC4.62□□□□□ -1.67
SEC61A2Q9H9S3 AL139148.1-201ENST00000427122 680 ntBASIC4.62□□□□□ -1.67
SEC61A2Q9H9S3 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.62□□□□□ -1.67
SEC61A2Q9H9S3 MTCO3P21-201ENST00000430791 643 ntBASIC4.62□□□□□ -1.67
SEC61A2Q9H9S3 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SEC61A2Q9H9S3 HSPE1P28-201ENST00000443139 211 ntBASIC4.62□□□□□ -1.67
SEC61A2Q9H9S3 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.62□□□□□ -1.67
SEC61A2Q9H9S3 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SEC61A2Q9H9S3 RN7SL172P-201ENST00000460535 303 ntBASIC4.62□□□□□ -1.67
SEC61A2Q9H9S3 RN7SL515P-201ENST00000463999 297 ntBASIC4.62□□□□□ -1.67
SEC61A2Q9H9S3 RPL7P39-201ENST00000481157 744 ntBASIC4.62□□□□□ -1.67
SEC61A2Q9H9S3 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC4.62□□□□□ -1.67
SEC61A2Q9H9S3 RN7SL30P-201ENST00000488416 306 ntBASIC4.62□□□□□ -1.67
SEC61A2Q9H9S3 AC011005.3-201ENST00000491624 395 ntBASIC4.62□□□□□ -1.67
SEC61A2Q9H9S3 AC006427.1-201ENST00000514359 712 ntBASIC4.62□□□□□ -1.67
SEC61A2Q9H9S3 AC093677.1-201ENST00000514414 678 ntBASIC4.62□□□□□ -1.67
SEC61A2Q9H9S3 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.62□□□□□ -1.67
SEC61A2Q9H9S3 SCARNA24.1-201ENST00000516465 137 ntBASIC4.62□□□□□ -1.67
SEC61A2Q9H9S3 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.62□□□□□ -1.67
SEC61A2Q9H9S3 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.62□□□□□ -1.67
SEC61A2Q9H9S3 LECT2-205ENST00000522943 574 ntTSL 3 BASIC4.62□□□□□ -1.67
SEC61A2Q9H9S3 AP003497.1-201ENST00000528472 562 ntBASIC4.62□□□□□ -1.67
SEC61A2Q9H9S3 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.62□□□□□ -1.67
SEC61A2Q9H9S3 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SEC61A2Q9H9S3 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.62□□□□□ -1.67
SEC61A2Q9H9S3 AC040958.1-201ENST00000561102 201 ntBASIC4.62□□□□□ -1.67
SEC61A2Q9H9S3 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.62□□□□□ -1.67
SEC61A2Q9H9S3 AC022884.2-201ENST00000578535 580 ntBASIC4.62□□□□□ -1.67
SEC61A2Q9H9S3 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
SEC61A2Q9H9S3 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4.62□□□□□ -1.67
SEC61A2Q9H9S3 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
SEC61A2Q9H9S3 OR7E18P-201ENST00000592589 702 ntBASIC4.62□□□□□ -1.67
SEC61A2Q9H9S3 SDR42E1P1-201ENST00000611327 477 ntBASIC4.62□□□□□ -1.67
SEC61A2Q9H9S3 AC010205.1-201ENST00000616668 449 ntBASIC4.62□□□□□ -1.67
SEC61A2Q9H9S3 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.62□□□□□ -1.67
SEC61A2Q9H9S3 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
SEC61A2Q9H9S3 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SEC61A2Q9H9S3 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SEC61A2Q9H9S3 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
SEC61A2Q9H9S3 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.62□□□□□ -1.67
SEC61A2Q9H9S3 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.62□□□□□ -1.67
SEC61A2Q9H9S3 AC012618.3-205ENST00000637896 1496 ntBASIC4.62□□□□□ -1.67
SEC61A2Q9H9S3 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SEC61A2Q9H9S3 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SEC61A2Q9H9S3 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
SEC61A2Q9H9S3 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
SEC61A2Q9H9S3 AC134882.1-201ENST00000603738 1676 ntBASIC4.61□□□□□ -1.67
SEC61A2Q9H9S3 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.61□□□□□ -1.67
SEC61A2Q9H9S3 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SEC61A2Q9H9S3 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC4.61□□□□□ -1.67
SEC61A2Q9H9S3 RNU6-1097P-201ENST00000363586 107 ntBASIC4.61□□□□□ -1.67
SEC61A2Q9H9S3 RNU1-146P-201ENST00000364015 165 ntBASIC4.61□□□□□ -1.67
SEC61A2Q9H9S3 RNA5SP90-201ENST00000364801 99 ntBASIC4.61□□□□□ -1.67
SEC61A2Q9H9S3 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SEC61A2Q9H9S3 Y_RNA.387-201ENST00000383918 102 ntBASIC4.61□□□□□ -1.67
SEC61A2Q9H9S3 MIR600-201ENST00000385007 98 ntBASIC4.61□□□□□ -1.67
SEC61A2Q9H9S3 MIR559-201ENST00000385188 96 ntBASIC4.61□□□□□ -1.67
SEC61A2Q9H9S3 AL356421.1-201ENST00000403255 413 ntBASIC4.61□□□□□ -1.67
SEC61A2Q9H9S3 DUTP5-201ENST00000406790 469 ntBASIC4.61□□□□□ -1.67
SEC61A2Q9H9S3 AL023807.1-201ENST00000407932 359 ntBASIC4.61□□□□□ -1.67
SEC61A2Q9H9S3 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.61□□□□□ -1.67
SEC61A2Q9H9S3 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.61□□□□□ -1.67
SEC61A2Q9H9S3 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 207.4 ms