Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.75□□□□□ -1.97
VCX3BQ9H321 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.75□□□□□ -1.97
VCX3BQ9H321 AC090740.1-201ENST00000623193 2262 ntBASIC2.75□□□□□ -1.97
VCX3BQ9H321 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
VCX3BQ9H321 AC073325.2-201ENST00000339545 159 ntBASIC2.75□□□□□ -1.97
VCX3BQ9H321 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC2.75□□□□□ -1.97
VCX3BQ9H321 SNORA1.3-201ENST00000384676 136 ntBASIC2.75□□□□□ -1.97
VCX3BQ9H321 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
VCX3BQ9H321 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC2.75□□□□□ -1.97
VCX3BQ9H321 TEX41-203ENST00000420472 765 ntTSL 3 BASIC2.75□□□□□ -1.97
VCX3BQ9H321 AL513175.2-201ENST00000422071 443 ntBASIC2.75□□□□□ -1.97
VCX3BQ9H321 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.75□□□□□ -1.97
VCX3BQ9H321 YY1P1-201ENST00000427625 668 ntBASIC2.75□□□□□ -1.97
VCX3BQ9H321 CR769767.1-201ENST00000436337 346 ntBASIC2.75□□□□□ -1.97
VCX3BQ9H321 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.75□□□□□ -1.97
VCX3BQ9H321 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.75□□□□□ -1.97
VCX3BQ9H321 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
VCX3BQ9H321 MRPL50P4-201ENST00000446432 475 ntBASIC2.75□□□□□ -1.97
VCX3BQ9H321 AC008155.2-201ENST00000464337 397 ntBASIC2.75□□□□□ -1.97
VCX3BQ9H321 KC877373.1-201ENST00000479066 408 ntBASIC2.75□□□□□ -1.97
VCX3BQ9H321 BLNK-209ENST00000495266 440 ntTSL 5 BASIC2.75□□□□□ -1.97
VCX3BQ9H321 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
VCX3BQ9H321 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
VCX3BQ9H321 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.75□□□□□ -1.97
VCX3BQ9H321 OR4G1P-201ENST00000588632 938 ntBASIC2.75□□□□□ -1.97
VCX3BQ9H321 AC135178.6-201ENST00000605314 398 ntBASIC2.75□□□□□ -1.97
VCX3BQ9H321 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.75□□□□□ -1.97
VCX3BQ9H321 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.75□□□□□ -1.97
VCX3BQ9H321 AC007318.2-201ENST00000620999 243 ntBASIC2.75□□□□□ -1.97
VCX3BQ9H321 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
VCX3BQ9H321 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC2.75□□□□□ -1.97
VCX3BQ9H321 MIR622-201ENST00000638396 96 ntBASIC2.75□□□□□ -1.97
VCX3BQ9H321 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
VCX3BQ9H321 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.75□□□□□ -1.97
VCX3BQ9H321 PABPC1P9-201ENST00000426076 1612 ntBASIC2.75□□□□□ -1.97
VCX3BQ9H321 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.75□□□□□ -1.97
VCX3BQ9H321 AC123912.3-201ENST00000600907 1367 ntBASIC2.74□□□□□ -1.97
VCX3BQ9H321 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
VCX3BQ9H321 AL359893.1-201ENST00000447628 1580 ntBASIC2.74□□□□□ -1.97
VCX3BQ9H321 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.74□□□□□ -1.97
VCX3BQ9H321 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
VCX3BQ9H321 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.74□□□□□ -1.97
VCX3BQ9H321 MIR372-201ENST00000362225 67 ntBASIC2.74□□□□□ -1.97
VCX3BQ9H321 RNU1-13P-201ENST00000384499 162 ntBASIC2.74□□□□□ -1.97
VCX3BQ9H321 U8.11-201ENST00000384699 133 ntBASIC2.74□□□□□ -1.97
VCX3BQ9H321 U8.12-201ENST00000384701 133 ntBASIC2.74□□□□□ -1.97
VCX3BQ9H321 TANK-206ENST00000406287 875 ntTSL 5 BASIC2.74□□□□□ -1.97
VCX3BQ9H321 RNA5SP181-201ENST00000410246 98 ntBASIC2.74□□□□□ -1.97
VCX3BQ9H321 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC2.74□□□□□ -1.97
VCX3BQ9H321 LINC01881-201ENST00000416103 412 ntBASIC2.74□□□□□ -1.97
VCX3BQ9H321 HSFY1P1-201ENST00000423928 1178 ntBASIC2.74□□□□□ -1.97
VCX3BQ9H321 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.74□□□□□ -1.97
VCX3BQ9H321 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC2.74□□□□□ -1.97
VCX3BQ9H321 AL671855.1-201ENST00000446875 1203 ntBASIC2.74□□□□□ -1.97
VCX3BQ9H321 OR51B8P-201ENST00000449892 769 ntBASIC2.74□□□□□ -1.97
VCX3BQ9H321 U8.18-201ENST00000459285 133 ntBASIC2.74□□□□□ -1.97
VCX3BQ9H321 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
VCX3BQ9H321 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.74□□□□□ -1.97
VCX3BQ9H321 MTCO1P47-201ENST00000523889 1271 ntBASIC2.74□□□□□ -1.97
VCX3BQ9H321 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
VCX3BQ9H321 RN7SL703P-201ENST00000578485 302 ntBASIC2.74□□□□□ -1.97
VCX3BQ9H321 MIR4284-201ENST00000578924 81 ntBASIC2.74□□□□□ -1.97
VCX3BQ9H321 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC2.74□□□□□ -1.97
VCX3BQ9H321 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC2.74□□□□□ -1.97
VCX3BQ9H321 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.74□□□□□ -1.97
VCX3BQ9H321 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC2.74□□□□□ -1.97
VCX3BQ9H321 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.74□□□□□ -1.97
VCX3BQ9H321 AC091953.5-201ENST00000622919 233 ntBASIC2.74□□□□□ -1.97
VCX3BQ9H321 AC010435.1-201ENST00000623353 1177 ntBASIC2.74□□□□□ -1.97
VCX3BQ9H321 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.74□□□□□ -1.97
VCX3BQ9H321 AC139713.2-210ENST00000641741 992 ntBASIC2.74□□□□□ -1.97
VCX3BQ9H321 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.74□□□□□ -1.97
VCX3BQ9H321 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
VCX3BQ9H321 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
VCX3BQ9H321 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.73□□□□□ -1.97
VCX3BQ9H321 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
VCX3BQ9H321 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.73□□□□□ -1.97
VCX3BQ9H321 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
VCX3BQ9H321 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
VCX3BQ9H321 RNU6-31P-201ENST00000384388 108 ntBASIC2.73□□□□□ -1.97
VCX3BQ9H321 CYB5AP4-201ENST00000396692 399 ntBASIC2.73□□□□□ -1.97
VCX3BQ9H321 RNU6-628P-201ENST00000410675 107 ntBASIC2.73□□□□□ -1.97
VCX3BQ9H321 BX842559.1-201ENST00000419615 532 ntBASIC2.73□□□□□ -1.97
VCX3BQ9H321 RPL7P37-201ENST00000425095 738 ntBASIC2.73□□□□□ -1.97
VCX3BQ9H321 MTCO1P45-201ENST00000431457 267 ntBASIC2.73□□□□□ -1.97
VCX3BQ9H321 AC073063.1-201ENST00000434352 607 ntBASIC2.73□□□□□ -1.97
VCX3BQ9H321 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.73□□□□□ -1.97
VCX3BQ9H321 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
VCX3BQ9H321 AC016696.1-201ENST00000446949 318 ntBASIC2.73□□□□□ -1.97
VCX3BQ9H321 AL162389.1-201ENST00000449233 177 ntBASIC2.73□□□□□ -1.97
VCX3BQ9H321 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.73□□□□□ -1.97
VCX3BQ9H321 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC2.73□□□□□ -1.97
VCX3BQ9H321 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.73□□□□□ -1.97
VCX3BQ9H321 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC2.73□□□□□ -1.97
VCX3BQ9H321 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC2.73□□□□□ -1.97
VCX3BQ9H321 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC2.73□□□□□ -1.97
VCX3BQ9H321 AC034236.1-201ENST00000469891 373 ntBASIC2.73□□□□□ -1.97
VCX3BQ9H321 SETP11-201ENST00000473027 690 ntBASIC2.73□□□□□ -1.97
VCX3BQ9H321 AC104689.1-201ENST00000473356 768 ntBASIC2.73□□□□□ -1.97
VCX3BQ9H321 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 150.5 ms