Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC2.76□□□□□ -1.97
SLIRPQ9GZT3 AC092754.2-201ENST00000463506 460 ntBASIC2.76□□□□□ -1.97
SLIRPQ9GZT3 AL136126.1-201ENST00000473603 402 ntBASIC2.76□□□□□ -1.97
SLIRPQ9GZT3 RPL23AP11-201ENST00000475260 469 ntBASIC2.76□□□□□ -1.97
SLIRPQ9GZT3 RN7SL633P-201ENST00000488974 297 ntBASIC2.76□□□□□ -1.97
SLIRPQ9GZT3 MTCO2P9-201ENST00000503214 694 ntBASIC2.76□□□□□ -1.97
SLIRPQ9GZT3 AC108064.1-201ENST00000513791 460 ntBASIC2.76□□□□□ -1.97
SLIRPQ9GZT3 MTCO2P32-201ENST00000514865 403 ntBASIC2.76□□□□□ -1.97
SLIRPQ9GZT3 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
SLIRPQ9GZT3 TRMT10BP1-201ENST00000519377 943 ntBASIC2.76□□□□□ -1.97
SLIRPQ9GZT3 RAB9BP1-201ENST00000519581 626 ntBASIC2.76□□□□□ -1.97
SLIRPQ9GZT3 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.76□□□□□ -1.97
SLIRPQ9GZT3 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.76□□□□□ -1.97
SLIRPQ9GZT3 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC2.76□□□□□ -1.97
SLIRPQ9GZT3 LSM6P2-201ENST00000552208 177 ntBASIC2.76□□□□□ -1.97
SLIRPQ9GZT3 PARP1P2-201ENST00000556806 195 ntBASIC2.76□□□□□ -1.97
SLIRPQ9GZT3 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC2.76□□□□□ -1.97
SLIRPQ9GZT3 ZNF415P1-201ENST00000582279 1166 ntBASIC2.76□□□□□ -1.97
SLIRPQ9GZT3 SNORD39.3-201ENST00000584451 71 ntBASIC2.76□□□□□ -1.97
SLIRPQ9GZT3 AC005776.1-201ENST00000603164 290 ntBASIC2.76□□□□□ -1.97
SLIRPQ9GZT3 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
SLIRPQ9GZT3 AC073968.1-201ENST00000618594 637 ntBASIC2.76□□□□□ -1.97
SLIRPQ9GZT3 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC2.76□□□□□ -1.97
SLIRPQ9GZT3 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
SLIRPQ9GZT3 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.76□□□□□ -1.97
SLIRPQ9GZT3 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
SLIRPQ9GZT3 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
SLIRPQ9GZT3 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SLIRPQ9GZT3 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SLIRPQ9GZT3 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
SLIRPQ9GZT3 AC002546.1-201ENST00000588041 2504 ntBASIC2.75□□□□□ -1.97
SLIRPQ9GZT3 AC004925.1-201ENST00000624256 2706 ntBASIC2.75□□□□□ -1.97
SLIRPQ9GZT3 GABRG2-229ENST00000641017 3628 ntBASIC2.75□□□□□ -1.97
SLIRPQ9GZT3 RNA5SP295-201ENST00000362655 121 ntBASIC2.75□□□□□ -1.97
SLIRPQ9GZT3 RNU6-115P-201ENST00000364310 107 ntBASIC2.75□□□□□ -1.97
SLIRPQ9GZT3 RNVU1-3-201ENST00000364313 161 ntBASIC2.75□□□□□ -1.97
SLIRPQ9GZT3 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.75□□□□□ -1.97
SLIRPQ9GZT3 RNU6-354P-201ENST00000383862 107 ntBASIC2.75□□□□□ -1.97
SLIRPQ9GZT3 RNU6-610P-201ENST00000384264 107 ntBASIC2.75□□□□□ -1.97
SLIRPQ9GZT3 MIR591-201ENST00000385290 95 ntBASIC2.75□□□□□ -1.97
SLIRPQ9GZT3 RPL23AP47-201ENST00000408017 460 ntBASIC2.75□□□□□ -1.97
SLIRPQ9GZT3 RNA5SP274-201ENST00000410484 108 ntBASIC2.75□□□□□ -1.97
SLIRPQ9GZT3 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC2.75□□□□□ -1.97
SLIRPQ9GZT3 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC2.75□□□□□ -1.97
SLIRPQ9GZT3 RPL31P54-201ENST00000429803 370 ntBASIC2.75□□□□□ -1.97
SLIRPQ9GZT3 AC234064.1-201ENST00000436312 247 ntBASIC2.75□□□□□ -1.97
SLIRPQ9GZT3 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC2.75□□□□□ -1.97
SLIRPQ9GZT3 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SLIRPQ9GZT3 RPS26P21-201ENST00000475397 348 ntBASIC2.75□□□□□ -1.97
SLIRPQ9GZT3 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC2.75□□□□□ -1.97
SLIRPQ9GZT3 RN7SL20P-201ENST00000488827 297 ntBASIC2.75□□□□□ -1.97
SLIRPQ9GZT3 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC2.75□□□□□ -1.97
SLIRPQ9GZT3 DYNLL1P6-201ENST00000503440 264 ntBASIC2.75□□□□□ -1.97
SLIRPQ9GZT3 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC2.75□□□□□ -1.97
SLIRPQ9GZT3 AC048346.1-201ENST00000510247 144 ntBASIC2.75□□□□□ -1.97
SLIRPQ9GZT3 MTCYBP37-201ENST00000510642 1133 ntBASIC2.75□□□□□ -1.97
SLIRPQ9GZT3 SNORA31.9-201ENST00000516429 84 ntBASIC2.75□□□□□ -1.97
SLIRPQ9GZT3 AC104986.1-201ENST00000517978 436 ntBASIC2.75□□□□□ -1.97
SLIRPQ9GZT3 IGKV2-26-201ENST00000518305 343 ntBASIC2.75□□□□□ -1.97
SLIRPQ9GZT3 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC2.75□□□□□ -1.97
SLIRPQ9GZT3 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC2.75□□□□□ -1.97
SLIRPQ9GZT3 AP000857.1-201ENST00000532151 543 ntBASIC2.75□□□□□ -1.97
SLIRPQ9GZT3 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.75□□□□□ -1.97
SLIRPQ9GZT3 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.75□□□□□ -1.97
SLIRPQ9GZT3 AL121603.1-201ENST00000553815 142 ntBASIC2.75□□□□□ -1.97
SLIRPQ9GZT3 AC005951.1-201ENST00000576706 485 ntBASIC2.75□□□□□ -1.97
SLIRPQ9GZT3 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC2.75□□□□□ -1.97
SLIRPQ9GZT3 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC2.75□□□□□ -1.97
SLIRPQ9GZT3 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC2.75□□□□□ -1.97
SLIRPQ9GZT3 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC2.75□□□□□ -1.97
SLIRPQ9GZT3 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC2.75□□□□□ -1.97
SLIRPQ9GZT3 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC2.75□□□□□ -1.97
SLIRPQ9GZT3 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.75□□□□□ -1.97
SLIRPQ9GZT3 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.75□□□□□ -1.97
SLIRPQ9GZT3 AC073342.3-201ENST00000624211 193 ntBASIC2.75□□□□□ -1.97
SLIRPQ9GZT3 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC2.75□□□□□ -1.97
SLIRPQ9GZT3 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC2.75□□□□□ -1.97
SLIRPQ9GZT3 BX649567.1-201ENST00000642071 1134 ntBASIC2.75□□□□□ -1.97
SLIRPQ9GZT3 AL365440.1-201ENST00000436135 2167 ntBASIC2.75□□□□□ -1.97
SLIRPQ9GZT3 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SLIRPQ9GZT3 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SLIRPQ9GZT3 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
SLIRPQ9GZT3 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SLIRPQ9GZT3 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC2.74□□□□□ -1.97
SLIRPQ9GZT3 RNU6-1249P-201ENST00000363237 111 ntBASIC2.74□□□□□ -1.97
SLIRPQ9GZT3 U6.112-201ENST00000384129 70 ntBASIC2.74□□□□□ -1.97
SLIRPQ9GZT3 RPL22P22-201ENST00000395439 379 ntBASIC2.74□□□□□ -1.97
SLIRPQ9GZT3 GSTA8P-201ENST00000404253 637 ntBASIC2.74□□□□□ -1.97
SLIRPQ9GZT3 AL139098.1-201ENST00000407291 389 ntBASIC2.74□□□□□ -1.97
SLIRPQ9GZT3 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2.74□□□□□ -1.97
SLIRPQ9GZT3 USP9YP19-201ENST00000412165 485 ntBASIC2.74□□□□□ -1.97
SLIRPQ9GZT3 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC2.74□□□□□ -1.97
SLIRPQ9GZT3 SFR1P2-201ENST00000421841 730 ntBASIC2.74□□□□□ -1.97
SLIRPQ9GZT3 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.74□□□□□ -1.97
SLIRPQ9GZT3 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SLIRPQ9GZT3 AL096829.2-201ENST00000446582 742 ntBASIC2.74□□□□□ -1.97
SLIRPQ9GZT3 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC2.74□□□□□ -1.97
SLIRPQ9GZT3 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SLIRPQ9GZT3 TRBV26-201ENST00000456572 344 ntBASIC2.74□□□□□ -1.97
SLIRPQ9GZT3 RPS29P33-201ENST00000456717 146 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms