Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CNTNAP4Q9C0A0 CPHL1P-201ENST00000461341 3407 ntBASIC5.78□□□□□ -1.48
CNTNAP4Q9C0A0 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC5.78□□□□□ -1.48
CNTNAP4Q9C0A0 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CNTNAP4Q9C0A0 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.78□□□□□ -1.48
CNTNAP4Q9C0A0 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CNTNAP4Q9C0A0 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CNTNAP4Q9C0A0 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.78□□□□□ -1.48
CNTNAP4Q9C0A0 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC5.77□□□□□ -1.49
CNTNAP4Q9C0A0 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
CNTNAP4Q9C0A0 FRG1BP-201ENST00000278882 761 ntBASIC5.77□□□□□ -1.49
CNTNAP4Q9C0A0 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
CNTNAP4Q9C0A0 FRG1CP-201ENST00000358464 769 ntBASIC5.77□□□□□ -1.49
CNTNAP4Q9C0A0 MIR383-201ENST00000362257 73 ntBASIC5.77□□□□□ -1.49
CNTNAP4Q9C0A0 AL359837.1-201ENST00000381357 287 ntBASIC5.77□□□□□ -1.49
CNTNAP4Q9C0A0 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC5.77□□□□□ -1.49
CNTNAP4Q9C0A0 AC017078.1-201ENST00000416146 368 ntBASIC5.77□□□□□ -1.49
CNTNAP4Q9C0A0 E2F6P2-201ENST00000420708 748 ntBASIC5.77□□□□□ -1.49
CNTNAP4Q9C0A0 MTND2P23-201ENST00000422990 651 ntBASIC5.77□□□□□ -1.49
CNTNAP4Q9C0A0 AC233981.1-201ENST00000423224 461 ntBASIC5.77□□□□□ -1.49
CNTNAP4Q9C0A0 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC5.77□□□□□ -1.49
CNTNAP4Q9C0A0 RPL23AP43-201ENST00000446445 471 ntBASIC5.77□□□□□ -1.49
CNTNAP4Q9C0A0 CR383656.1-201ENST00000484916 377 ntBASIC5.77□□□□□ -1.49
CNTNAP4Q9C0A0 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
CNTNAP4Q9C0A0 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
CNTNAP4Q9C0A0 AC097486.1-201ENST00000515331 210 ntBASIC5.77□□□□□ -1.49
CNTNAP4Q9C0A0 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC5.77□□□□□ -1.49
CNTNAP4Q9C0A0 AC008562.1-201ENST00000521763 330 ntBASIC5.77□□□□□ -1.49
CNTNAP4Q9C0A0 AP000790.1-201ENST00000528891 737 ntBASIC5.77□□□□□ -1.49
CNTNAP4Q9C0A0 AP003072.1-201ENST00000531740 145 ntBASIC5.77□□□□□ -1.49
CNTNAP4Q9C0A0 OR8R1P-201ENST00000543943 764 ntBASIC5.77□□□□□ -1.49
CNTNAP4Q9C0A0 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC5.77□□□□□ -1.49
CNTNAP4Q9C0A0 AL157394.1-201ENST00000562983 1224 ntBASIC5.77□□□□□ -1.49
CNTNAP4Q9C0A0 AC015917.1-201ENST00000579654 510 ntBASIC5.77□□□□□ -1.49
CNTNAP4Q9C0A0 AC124312.5-201ENST00000604451 268 ntBASIC5.77□□□□□ -1.49
CNTNAP4Q9C0A0 AC020634.1-201ENST00000608701 549 ntBASIC5.77□□□□□ -1.49
CNTNAP4Q9C0A0 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC5.77□□□□□ -1.49
CNTNAP4Q9C0A0 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC5.77□□□□□ -1.49
CNTNAP4Q9C0A0 YWHAEP7-203ENST00000622054 312 ntBASIC5.77□□□□□ -1.49
CNTNAP4Q9C0A0 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.77□□□□□ -1.49
CNTNAP4Q9C0A0 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.77□□□□□ -1.49
CNTNAP4Q9C0A0 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
CNTNAP4Q9C0A0 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.77□□□□□ -1.49
CNTNAP4Q9C0A0 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.77□□□□□ -1.49
CNTNAP4Q9C0A0 RNF6P1-201ENST00000444889 1784 ntBASIC5.77□□□□□ -1.49
CNTNAP4Q9C0A0 OR11H5P-202ENST00000641612 1325 ntBASIC5.77□□□□□ -1.49
CNTNAP4Q9C0A0 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
CNTNAP4Q9C0A0 AC116158.1-201ENST00000560231 2129 ntBASIC5.77□□□□□ -1.49
CNTNAP4Q9C0A0 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
CNTNAP4Q9C0A0 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
CNTNAP4Q9C0A0 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
CNTNAP4Q9C0A0 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CNTNAP4Q9C0A0 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CNTNAP4Q9C0A0 SNORD81.2-201ENST00000365153 76 ntBASIC5.76□□□□□ -1.49
CNTNAP4Q9C0A0 RNU6-769P-201ENST00000384407 104 ntBASIC5.76□□□□□ -1.49
CNTNAP4Q9C0A0 RNU6-907P-201ENST00000390924 102 ntBASIC5.76□□□□□ -1.49
CNTNAP4Q9C0A0 SNORA11F-201ENST00000408237 128 ntBASIC5.76□□□□□ -1.49
CNTNAP4Q9C0A0 SNRPFP1-201ENST00000414761 252 ntBASIC5.76□□□□□ -1.49
CNTNAP4Q9C0A0 VN1R36P-201ENST00000414936 291 ntBASIC5.76□□□□□ -1.49
CNTNAP4Q9C0A0 OR4F13P-201ENST00000428478 931 ntBASIC5.76□□□□□ -1.49
CNTNAP4Q9C0A0 AC073069.1-201ENST00000428657 441 ntBASIC5.76□□□□□ -1.49
CNTNAP4Q9C0A0 LSM1P1-201ENST00000438629 273 ntBASIC5.76□□□□□ -1.49
CNTNAP4Q9C0A0 RPL22P17-201ENST00000438729 315 ntBASIC5.76□□□□□ -1.49
CNTNAP4Q9C0A0 RPL17P49-201ENST00000443728 411 ntBASIC5.76□□□□□ -1.49
CNTNAP4Q9C0A0 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC5.76□□□□□ -1.49
CNTNAP4Q9C0A0 Z95327.1-201ENST00000446082 482 ntBASIC5.76□□□□□ -1.49
CNTNAP4Q9C0A0 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC5.76□□□□□ -1.49
CNTNAP4Q9C0A0 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC5.76□□□□□ -1.49
CNTNAP4Q9C0A0 AC023424.1-201ENST00000496058 459 ntBASIC5.76□□□□□ -1.49
CNTNAP4Q9C0A0 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.76□□□□□ -1.49
CNTNAP4Q9C0A0 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC5.76□□□□□ -1.49
CNTNAP4Q9C0A0 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC5.76□□□□□ -1.49
CNTNAP4Q9C0A0 AC011611.1-201ENST00000552179 197 ntBASIC5.76□□□□□ -1.49
CNTNAP4Q9C0A0 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC5.76□□□□□ -1.49
CNTNAP4Q9C0A0 VN1R84P-201ENST00000593697 235 ntBASIC5.76□□□□□ -1.49
CNTNAP4Q9C0A0 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC5.76□□□□□ -1.49
CNTNAP4Q9C0A0 AC113403.1-201ENST00000604910 193 ntBASIC5.76□□□□□ -1.49
CNTNAP4Q9C0A0 AL451049.1-201ENST00000608672 497 ntBASIC5.76□□□□□ -1.49
CNTNAP4Q9C0A0 AP001521.1-201ENST00000609150 300 ntBASIC5.76□□□□□ -1.49
CNTNAP4Q9C0A0 AL161734.1-201ENST00000609720 557 ntBASIC5.76□□□□□ -1.49
CNTNAP4Q9C0A0 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC5.76□□□□□ -1.49
CNTNAP4Q9C0A0 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.76□□□□□ -1.49
CNTNAP4Q9C0A0 CKAP2P1-201ENST00000555477 2049 ntBASIC5.76□□□□□ -1.49
CNTNAP4Q9C0A0 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
CNTNAP4Q9C0A0 PTER-201ENST00000298942 3448 ntTSL 5 BASIC5.76□□□□□ -1.49
CNTNAP4Q9C0A0 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
CNTNAP4Q9C0A0 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.76□□□□□ -1.49
CNTNAP4Q9C0A0 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CNTNAP4Q9C0A0 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CNTNAP4Q9C0A0 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CNTNAP4Q9C0A0 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
CNTNAP4Q9C0A0 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
CNTNAP4Q9C0A0 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.76□□□□□ -1.49
CNTNAP4Q9C0A0 AC024560.2-201ENST00000507981 1497 ntBASIC5.76□□□□□ -1.49
CNTNAP4Q9C0A0 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
CNTNAP4Q9C0A0 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CNTNAP4Q9C0A0 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CNTNAP4Q9C0A0 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CNTNAP4Q9C0A0 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CNTNAP4Q9C0A0 HMGB1P17-201ENST00000403495 628 ntBASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms