Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 AL391684.1-202ENST00000641293 1636 ntBASIC5.88□□□□□ -1.47
CNTNAP3Q9BZ76 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
CNTNAP3Q9BZ76 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.88□□□□□ -1.47
CNTNAP3Q9BZ76 Y_RNA.84-201ENST00000363011 104 ntBASIC5.88□□□□□ -1.47
CNTNAP3Q9BZ76 RNU4-42P-201ENST00000364738 142 ntBASIC5.88□□□□□ -1.47
CNTNAP3Q9BZ76 RNY3P13-201ENST00000365542 102 ntBASIC5.88□□□□□ -1.47
CNTNAP3Q9BZ76 RNU6-128P-201ENST00000383976 107 ntBASIC5.88□□□□□ -1.47
CNTNAP3Q9BZ76 SNORA22C-201ENST00000384614 134 ntBASIC5.88□□□□□ -1.47
CNTNAP3Q9BZ76 MIR765-201ENST00000390226 114 ntBASIC5.88□□□□□ -1.47
CNTNAP3Q9BZ76 RNU6-1154P-201ENST00000391001 104 ntBASIC5.88□□□□□ -1.47
CNTNAP3Q9BZ76 Y_RNA.629-201ENST00000411368 105 ntBASIC5.88□□□□□ -1.47
CNTNAP3Q9BZ76 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC5.88□□□□□ -1.47
CNTNAP3Q9BZ76 AL662874.1-201ENST00000426065 230 ntBASIC5.88□□□□□ -1.47
CNTNAP3Q9BZ76 AC016027.5-201ENST00000427227 210 ntBASIC5.88□□□□□ -1.47
CNTNAP3Q9BZ76 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
CNTNAP3Q9BZ76 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.88□□□□□ -1.47
CNTNAP3Q9BZ76 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
CNTNAP3Q9BZ76 RPL29P29-201ENST00000448725 423 ntBASIC5.88□□□□□ -1.47
CNTNAP3Q9BZ76 TPT1P12-201ENST00000448968 492 ntBASIC5.88□□□□□ -1.47
CNTNAP3Q9BZ76 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.88□□□□□ -1.47
CNTNAP3Q9BZ76 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC5.88□□□□□ -1.47
CNTNAP3Q9BZ76 RPS4XP1-201ENST00000482189 787 ntBASIC5.88□□□□□ -1.47
CNTNAP3Q9BZ76 RN7SL547P-201ENST00000490793 290 ntBASIC5.88□□□□□ -1.47
CNTNAP3Q9BZ76 AC008716.1-201ENST00000511084 513 ntBASIC5.88□□□□□ -1.47
CNTNAP3Q9BZ76 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CNTNAP3Q9BZ76 IL7R-208ENST00000511982 612 ntTSL 2 BASIC5.88□□□□□ -1.47
CNTNAP3Q9BZ76 RAB9BP1-201ENST00000519581 626 ntBASIC5.88□□□□□ -1.47
CNTNAP3Q9BZ76 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC5.88□□□□□ -1.47
CNTNAP3Q9BZ76 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC5.88□□□□□ -1.47
CNTNAP3Q9BZ76 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
CNTNAP3Q9BZ76 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC5.88□□□□□ -1.47
CNTNAP3Q9BZ76 AC023827.2-201ENST00000566880 1061 ntBASIC5.88□□□□□ -1.47
CNTNAP3Q9BZ76 AC067852.5-201ENST00000589299 310 ntBASIC5.88□□□□□ -1.47
CNTNAP3Q9BZ76 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.88□□□□□ -1.47
CNTNAP3Q9BZ76 HMGN2P28-201ENST00000606102 262 ntBASIC5.88□□□□□ -1.47
CNTNAP3Q9BZ76 AL445363.3-201ENST00000623080 671 ntBASIC5.88□□□□□ -1.47
CNTNAP3Q9BZ76 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC5.88□□□□□ -1.47
CNTNAP3Q9BZ76 AL450472.1-202ENST00000637286 180 ntBASIC5.88□□□□□ -1.47
CNTNAP3Q9BZ76 AC073869.10-201ENST00000642016 354 ntBASIC5.88□□□□□ -1.47
CNTNAP3Q9BZ76 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
CNTNAP3Q9BZ76 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CNTNAP3Q9BZ76 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CNTNAP3Q9BZ76 OLMALINC-203ENST00000641087 3779 ntBASIC5.88□□□□□ -1.47
CNTNAP3Q9BZ76 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CNTNAP3Q9BZ76 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CNTNAP3Q9BZ76 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CNTNAP3Q9BZ76 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC5.88□□□□□ -1.47
CNTNAP3Q9BZ76 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CNTNAP3Q9BZ76 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
CNTNAP3Q9BZ76 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC5.87□□□□□ -1.47
CNTNAP3Q9BZ76 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
CNTNAP3Q9BZ76 DMD-205ENST00000359836 7339 ntTSL 5 BASIC5.87□□□□□ -1.47
CNTNAP3Q9BZ76 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
CNTNAP3Q9BZ76 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
CNTNAP3Q9BZ76 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
CNTNAP3Q9BZ76 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CNTNAP3Q9BZ76 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC5.87□□□□□ -1.47
CNTNAP3Q9BZ76 AC110597.1-201ENST00000562669 3176 ntBASIC5.87□□□□□ -1.47
CNTNAP3Q9BZ76 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC5.87□□□□□ -1.47
CNTNAP3Q9BZ76 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CNTNAP3Q9BZ76 AL391987.6-201ENST00000305671 199 ntBASIC5.87□□□□□ -1.47
CNTNAP3Q9BZ76 RNA5SP500-201ENST00000364486 119 ntBASIC5.87□□□□□ -1.47
CNTNAP3Q9BZ76 Y_RNA.277-201ENST00000364754 102 ntBASIC5.87□□□□□ -1.47
CNTNAP3Q9BZ76 RFX3-203ENST00000381984 364 ntTSL 3 BASIC5.87□□□□□ -1.47
CNTNAP3Q9BZ76 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CNTNAP3Q9BZ76 MIR541-201ENST00000401360 84 ntBASIC5.87□□□□□ -1.47
CNTNAP3Q9BZ76 HMGB1P20-201ENST00000402555 677 ntBASIC5.87□□□□□ -1.47
CNTNAP3Q9BZ76 RN7SKP235-201ENST00000410662 305 ntBASIC5.87□□□□□ -1.47
CNTNAP3Q9BZ76 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
CNTNAP3Q9BZ76 CR769767.1-201ENST00000436337 346 ntBASIC5.87□□□□□ -1.47
CNTNAP3Q9BZ76 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC5.87□□□□□ -1.47
CNTNAP3Q9BZ76 RPL23AP43-201ENST00000446445 471 ntBASIC5.87□□□□□ -1.47
CNTNAP3Q9BZ76 snoU13.8-201ENST00000458890 104 ntBASIC5.87□□□□□ -1.47
CNTNAP3Q9BZ76 AC104472.2-201ENST00000469035 601 ntBASIC5.87□□□□□ -1.47
CNTNAP3Q9BZ76 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.87□□□□□ -1.47
CNTNAP3Q9BZ76 AC026979.1-201ENST00000492525 396 ntBASIC5.87□□□□□ -1.47
CNTNAP3Q9BZ76 RNU6-861P-201ENST00000516745 106 ntBASIC5.87□□□□□ -1.47
CNTNAP3Q9BZ76 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC5.87□□□□□ -1.47
CNTNAP3Q9BZ76 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC5.87□□□□□ -1.47
CNTNAP3Q9BZ76 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
CNTNAP3Q9BZ76 MIR5692C1-201ENST00000585309 91 ntBASIC5.87□□□□□ -1.47
CNTNAP3Q9BZ76 AC025857.2-201ENST00000602711 238 ntBASIC5.87□□□□□ -1.47
CNTNAP3Q9BZ76 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC5.87□□□□□ -1.47
CNTNAP3Q9BZ76 AL031666.3-201ENST00000609320 1006 ntBASIC5.87□□□□□ -1.47
CNTNAP3Q9BZ76 AL159153.1-201ENST00000619688 317 ntBASIC5.87□□□□□ -1.47
CNTNAP3Q9BZ76 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.87□□□□□ -1.47
CNTNAP3Q9BZ76 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CNTNAP3Q9BZ76 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
CNTNAP3Q9BZ76 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CNTNAP3Q9BZ76 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CNTNAP3Q9BZ76 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.87□□□□□ -1.47
CNTNAP3Q9BZ76 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CNTNAP3Q9BZ76 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CNTNAP3Q9BZ76 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC5.87□□□□□ -1.47
CNTNAP3Q9BZ76 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
CNTNAP3Q9BZ76 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CNTNAP3Q9BZ76 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC5.86□□□□□ -1.47
CNTNAP3Q9BZ76 AP000547.3-204ENST00000588548 2523 ntBASIC5.86□□□□□ -1.47
CNTNAP3Q9BZ76 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
CNTNAP3Q9BZ76 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms