Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 MIR1271-201ENST00000408537 86 ntBASIC5.22□□□□□ -1.57
TRIM55Q9BYV6 RNU6-712P-201ENST00000410558 100 ntBASIC5.22□□□□□ -1.57
TRIM55Q9BYV6 RNU6-516P-201ENST00000411381 104 ntBASIC5.22□□□□□ -1.57
TRIM55Q9BYV6 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC5.22□□□□□ -1.57
TRIM55Q9BYV6 RPL23AP30-201ENST00000432419 501 ntBASIC5.22□□□□□ -1.57
TRIM55Q9BYV6 HMGB1P31-201ENST00000437242 427 ntBASIC5.22□□□□□ -1.57
TRIM55Q9BYV6 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.22□□□□□ -1.57
TRIM55Q9BYV6 BTF3P6-201ENST00000448054 499 ntBASIC5.22□□□□□ -1.57
TRIM55Q9BYV6 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC5.22□□□□□ -1.57
TRIM55Q9BYV6 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC5.22□□□□□ -1.57
TRIM55Q9BYV6 RPS21P4-201ENST00000487122 248 ntBASIC5.22□□□□□ -1.57
TRIM55Q9BYV6 AC108145.1-201ENST00000503770 153 ntBASIC5.22□□□□□ -1.57
TRIM55Q9BYV6 IGKV1OR2-1-201ENST00000514060 354 ntBASIC5.22□□□□□ -1.57
TRIM55Q9BYV6 SCARNA24.1-201ENST00000516465 137 ntBASIC5.22□□□□□ -1.57
TRIM55Q9BYV6 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC5.22□□□□□ -1.57
TRIM55Q9BYV6 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC5.22□□□□□ -1.57
TRIM55Q9BYV6 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.22□□□□□ -1.57
TRIM55Q9BYV6 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC5.22□□□□□ -1.57
TRIM55Q9BYV6 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC5.22□□□□□ -1.57
TRIM55Q9BYV6 AC118273.2-201ENST00000532092 465 ntBASIC5.22□□□□□ -1.57
TRIM55Q9BYV6 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.22□□□□□ -1.57
TRIM55Q9BYV6 AP005205.1-201ENST00000563503 508 ntBASIC5.22□□□□□ -1.57
TRIM55Q9BYV6 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC5.22□□□□□ -1.57
TRIM55Q9BYV6 OR4K8P-201ENST00000578842 1048 ntBASIC5.22□□□□□ -1.57
TRIM55Q9BYV6 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.22□□□□□ -1.57
TRIM55Q9BYV6 AC012616.1-201ENST00000600294 197 ntBASIC5.22□□□□□ -1.57
TRIM55Q9BYV6 IGKV1OR2-118-201ENST00000603238 347 ntBASIC5.22□□□□□ -1.57
TRIM55Q9BYV6 AC067959.1-201ENST00000604334 379 ntBASIC5.22□□□□□ -1.57
TRIM55Q9BYV6 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC5.22□□□□□ -1.57
TRIM55Q9BYV6 TUG1_1.1-201ENST00000610654 145 ntBASIC5.22□□□□□ -1.57
TRIM55Q9BYV6 AL118522.2-201ENST00000616045 615 ntBASIC5.22□□□□□ -1.57
TRIM55Q9BYV6 AC002553.4-201ENST00000616896 331 ntBASIC5.22□□□□□ -1.57
TRIM55Q9BYV6 AC131238.1-201ENST00000617135 328 ntBASIC5.22□□□□□ -1.57
TRIM55Q9BYV6 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC5.22□□□□□ -1.57
TRIM55Q9BYV6 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.22□□□□□ -1.57
TRIM55Q9BYV6 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
TRIM55Q9BYV6 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.22□□□□□ -1.57
TRIM55Q9BYV6 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TRIM55Q9BYV6 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TRIM55Q9BYV6 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TRIM55Q9BYV6 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TRIM55Q9BYV6 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TRIM55Q9BYV6 AP000542.2-201ENST00000623199 6179 ntBASIC5.22□□□□□ -1.57
TRIM55Q9BYV6 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.22□□□□□ -1.57
TRIM55Q9BYV6 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.22□□□□□ -1.57
TRIM55Q9BYV6 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
TRIM55Q9BYV6 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
TRIM55Q9BYV6 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.22□□□□□ -1.57
TRIM55Q9BYV6 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
TRIM55Q9BYV6 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TRIM55Q9BYV6 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TRIM55Q9BYV6 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TRIM55Q9BYV6 TANK-205ENST00000405852 2155 ntTSL 5 BASIC5.21□□□□□ -1.58
TRIM55Q9BYV6 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
TRIM55Q9BYV6 RNU6-534P-201ENST00000364877 106 ntBASIC5.21□□□□□ -1.58
TRIM55Q9BYV6 Y_RNA.481-201ENST00000384373 102 ntBASIC5.21□□□□□ -1.58
TRIM55Q9BYV6 RNA5SP487-201ENST00000410186 122 ntBASIC5.21□□□□□ -1.58
TRIM55Q9BYV6 JKAMPP1-201ENST00000413804 919 ntBASIC5.21□□□□□ -1.58
TRIM55Q9BYV6 AL137014.1-201ENST00000420490 1226 ntBASIC5.21□□□□□ -1.58
TRIM55Q9BYV6 OR52B5P-201ENST00000435337 951 ntBASIC5.21□□□□□ -1.58
TRIM55Q9BYV6 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC5.21□□□□□ -1.58
TRIM55Q9BYV6 OR6D1P-201ENST00000436165 939 ntBASIC5.21□□□□□ -1.58
TRIM55Q9BYV6 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.21□□□□□ -1.58
TRIM55Q9BYV6 AL591473.1-201ENST00000464297 313 ntBASIC5.21□□□□□ -1.58
TRIM55Q9BYV6 RPSAP50-201ENST00000481955 852 ntBASIC5.21□□□□□ -1.58
TRIM55Q9BYV6 AC097173.1-201ENST00000505862 819 ntBASIC5.21□□□□□ -1.58
TRIM55Q9BYV6 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC5.21□□□□□ -1.58
TRIM55Q9BYV6 RN7SKP99-201ENST00000517028 307 ntBASIC5.21□□□□□ -1.58
TRIM55Q9BYV6 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC5.21□□□□□ -1.58
TRIM55Q9BYV6 AC126177.5-201ENST00000549599 178 ntBASIC5.21□□□□□ -1.58
TRIM55Q9BYV6 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.21□□□□□ -1.58
TRIM55Q9BYV6 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.21□□□□□ -1.58
TRIM55Q9BYV6 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC5.21□□□□□ -1.58
TRIM55Q9BYV6 HMGB2P1-201ENST00000591146 634 ntBASIC5.21□□□□□ -1.58
TRIM55Q9BYV6 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC5.21□□□□□ -1.58
TRIM55Q9BYV6 AC025449.1-201ENST00000603896 529 ntBASIC5.21□□□□□ -1.58
TRIM55Q9BYV6 Z84480.1-201ENST00000605131 311 ntBASIC5.21□□□□□ -1.58
TRIM55Q9BYV6 AC000068.2-201ENST00000608816 460 ntBASIC5.21□□□□□ -1.58
TRIM55Q9BYV6 AC103710.2-201ENST00000609912 942 ntBASIC5.21□□□□□ -1.58
TRIM55Q9BYV6 AL121612.2-201ENST00000612261 482 ntBASIC5.21□□□□□ -1.58
TRIM55Q9BYV6 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.21□□□□□ -1.58
TRIM55Q9BYV6 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TRIM55Q9BYV6 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
TRIM55Q9BYV6 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TRIM55Q9BYV6 CR848007.1-201ENST00000442354 1699 ntBASIC5.21□□□□□ -1.58
TRIM55Q9BYV6 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TRIM55Q9BYV6 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TRIM55Q9BYV6 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM55Q9BYV6 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM55Q9BYV6 NXPH1-205ENST00000602349 1953 ntBASIC5.2□□□□□ -1.58
TRIM55Q9BYV6 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC5.2□□□□□ -1.58
TRIM55Q9BYV6 RPL23P2-201ENST00000320371 421 ntBASIC5.2□□□□□ -1.58
TRIM55Q9BYV6 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM55Q9BYV6 Y_RNA.89-201ENST00000363031 102 ntBASIC5.2□□□□□ -1.58
TRIM55Q9BYV6 RNU6-1097P-201ENST00000363586 107 ntBASIC5.2□□□□□ -1.58
TRIM55Q9BYV6 U8.4-201ENST00000363626 134 ntBASIC5.2□□□□□ -1.58
TRIM55Q9BYV6 RNU6-867P-201ENST00000364956 107 ntBASIC5.2□□□□□ -1.58
TRIM55Q9BYV6 UBBP2-201ENST00000376781 231 ntBASIC5.2□□□□□ -1.58
TRIM55Q9BYV6 RNU6-637P-201ENST00000384050 107 ntBASIC5.2□□□□□ -1.58
TRIM55Q9BYV6 RNU6-432P-201ENST00000384196 109 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms