Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 AC234781.5-201ENST00000508429 271 ntBASIC3.86□□□□□ -1.79
SCAPERQ9BY12 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.86□□□□□ -1.79
SCAPERQ9BY12 MTND5P21-201ENST00000531961 522 ntBASIC3.86□□□□□ -1.79
SCAPERQ9BY12 YWHAZP1-201ENST00000556286 722 ntBASIC3.86□□□□□ -1.79
SCAPERQ9BY12 MIR1273D-201ENST00000577266 86 ntBASIC3.86□□□□□ -1.79
SCAPERQ9BY12 MIR4506-201ENST00000584693 77 ntBASIC3.86□□□□□ -1.79
SCAPERQ9BY12 NTAN1P1-201ENST00000603150 646 ntBASIC3.86□□□□□ -1.79
SCAPERQ9BY12 AL020991.1-201ENST00000612314 373 ntBASIC3.86□□□□□ -1.79
SCAPERQ9BY12 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.86□□□□□ -1.79
SCAPERQ9BY12 AC009159.1-201ENST00000618386 642 ntBASIC3.86□□□□□ -1.79
SCAPERQ9BY12 AP006248.2-201ENST00000623309 592 ntBASIC3.86□□□□□ -1.79
SCAPERQ9BY12 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.86□□□□□ -1.79
SCAPERQ9BY12 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.85□□□□□ -1.79
SCAPERQ9BY12 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
SCAPERQ9BY12 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SCAPERQ9BY12 GTF2H2B-203ENST00000508065 1432 ntBASIC3.85□□□□□ -1.79
SCAPERQ9BY12 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC3.85□□□□□ -1.79
SCAPERQ9BY12 GAPDHP27-201ENST00000447427 1020 ntBASIC3.85□□□□□ -1.79
SCAPERQ9BY12 TRAV31-201ENST00000502780 342 ntBASIC3.85□□□□□ -1.79
SCAPERQ9BY12 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.85□□□□□ -1.79
SCAPERQ9BY12 AC122134.1-201ENST00000565664 1104 ntBASIC3.85□□□□□ -1.79
SCAPERQ9BY12 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.85□□□□□ -1.79
SCAPERQ9BY12 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SCAPERQ9BY12 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.85□□□□□ -1.79
SCAPERQ9BY12 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.84□□□□□ -1.79
SCAPERQ9BY12 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SCAPERQ9BY12 DYNLT3P1-201ENST00000378574 347 ntBASIC3.84□□□□□ -1.79
SCAPERQ9BY12 AL359511.1-201ENST00000402970 211 ntBASIC3.84□□□□□ -1.79
SCAPERQ9BY12 RN7SKP123-201ENST00000410732 291 ntBASIC3.84□□□□□ -1.79
SCAPERQ9BY12 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC3.84□□□□□ -1.79
SCAPERQ9BY12 SNORA9.3-201ENST00000516383 129 ntBASIC3.84□□□□□ -1.79
SCAPERQ9BY12 Y_RNA.676-201ENST00000516393 96 ntBASIC3.84□□□□□ -1.79
SCAPERQ9BY12 IGKV2-36-201ENST00000519999 223 ntBASIC3.84□□□□□ -1.79
SCAPERQ9BY12 AC128657.1-201ENST00000549459 145 ntBASIC3.84□□□□□ -1.79
SCAPERQ9BY12 CKS1BP1-201ENST00000555221 240 ntBASIC3.84□□□□□ -1.79
SCAPERQ9BY12 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.84□□□□□ -1.79
SCAPERQ9BY12 AL606537.1-201ENST00000607258 2011 ntBASIC3.84□□□□□ -1.8
SCAPERQ9BY12 AP001486.2-201ENST00000561652 5113 ntBASIC3.83□□□□□ -1.8
SCAPERQ9BY12 5S_rRNA.2-201ENST00000391293 112 ntBASIC3.83□□□□□ -1.8
SCAPERQ9BY12 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.83□□□□□ -1.8
SCAPERQ9BY12 XIST-201ENST00000416330 750 ntTSL 2 BASIC3.83□□□□□ -1.8
SCAPERQ9BY12 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.83□□□□□ -1.8
SCAPERQ9BY12 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC3.83□□□□□ -1.8
SCAPERQ9BY12 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.83□□□□□ -1.8
SCAPERQ9BY12 AC100870.1-201ENST00000522035 505 ntBASIC3.83□□□□□ -1.8
SCAPERQ9BY12 AC010620.2-201ENST00000600135 313 ntBASIC3.83□□□□□ -1.8
SCAPERQ9BY12 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.83□□□□□ -1.8
SCAPERQ9BY12 AC022031.1-201ENST00000585985 2593 ntBASIC3.83□□□□□ -1.8
SCAPERQ9BY12 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.83□□□□□ -1.8
SCAPERQ9BY12 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SCAPERQ9BY12 AP006437.1-201ENST00000641440 3685 ntBASIC3.82□□□□□ -1.8
SCAPERQ9BY12 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.82□□□□□ -1.8
SCAPERQ9BY12 SNORD114-1-201ENST00000362705 72 ntBASIC3.82□□□□□ -1.8
SCAPERQ9BY12 RNU6-178P-201ENST00000384631 104 ntBASIC3.82□□□□□ -1.8
SCAPERQ9BY12 DPH3P2-201ENST00000422618 250 ntBASIC3.82□□□□□ -1.8
SCAPERQ9BY12 AC011816.1-201ENST00000441346 546 ntBASIC3.82□□□□□ -1.8
SCAPERQ9BY12 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.82□□□□□ -1.8
SCAPERQ9BY12 GAPDHP39-201ENST00000481866 979 ntBASIC3.82□□□□□ -1.8
SCAPERQ9BY12 RNA5SP385-201ENST00000515947 110 ntBASIC3.82□□□□□ -1.8
SCAPERQ9BY12 OR8L1P-201ENST00000534005 955 ntBASIC3.82□□□□□ -1.8
SCAPERQ9BY12 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3.82□□□□□ -1.8
SCAPERQ9BY12 AC009163.5-201ENST00000575421 637 ntBASIC3.82□□□□□ -1.8
SCAPERQ9BY12 SNORA35B-201ENST00000607417 129 ntBASIC3.82□□□□□ -1.8
SCAPERQ9BY12 PISRT1-201ENST00000626175 531 ntBASIC3.82□□□□□ -1.8
SCAPERQ9BY12 SNORA50A-202ENST00000629536 136 ntBASIC3.82□□□□□ -1.8
SCAPERQ9BY12 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SCAPERQ9BY12 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
SCAPERQ9BY12 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SCAPERQ9BY12 MTCO1P9-201ENST00000505577 1534 ntBASIC3.82□□□□□ -1.8
SCAPERQ9BY12 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
SCAPERQ9BY12 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
SCAPERQ9BY12 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.81□□□□□ -1.8
SCAPERQ9BY12 RPL21P132-201ENST00000331267 462 ntBASIC3.81□□□□□ -1.8
SCAPERQ9BY12 RNA5SP99-201ENST00000364020 114 ntBASIC3.81□□□□□ -1.8
SCAPERQ9BY12 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.81□□□□□ -1.8
SCAPERQ9BY12 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.81□□□□□ -1.8
SCAPERQ9BY12 CACYBPP2-201ENST00000453625 678 ntBASIC3.81□□□□□ -1.8
SCAPERQ9BY12 AC011037.1-201ENST00000483964 558 ntBASIC3.81□□□□□ -1.8
SCAPERQ9BY12 AC034244.2-201ENST00000514668 858 ntBASIC3.81□□□□□ -1.8
SCAPERQ9BY12 RNA5SP76-201ENST00000516277 87 ntBASIC3.81□□□□□ -1.8
SCAPERQ9BY12 Y_RNA.673-201ENST00000516306 88 ntBASIC3.81□□□□□ -1.8
SCAPERQ9BY12 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
SCAPERQ9BY12 AC083760.1-201ENST00000589621 670 ntBASIC3.81□□□□□ -1.8
SCAPERQ9BY12 AC006116.7-201ENST00000590141 756 ntBASIC3.81□□□□□ -1.8
SCAPERQ9BY12 AC103810.6-201ENST00000606708 136 ntBASIC3.81□□□□□ -1.8
SCAPERQ9BY12 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
SCAPERQ9BY12 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SCAPERQ9BY12 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SCAPERQ9BY12 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SCAPERQ9BY12 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SCAPERQ9BY12 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
SCAPERQ9BY12 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
SCAPERQ9BY12 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
SCAPERQ9BY12 MIR181B1-201ENST00000385240 110 ntBASIC3.8□□□□□ -1.8
SCAPERQ9BY12 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SCAPERQ9BY12 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.8□□□□□ -1.8
SCAPERQ9BY12 MTCYBP31-201ENST00000438855 1122 ntBASIC3.8□□□□□ -1.8
SCAPERQ9BY12 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.8□□□□□ -1.8
SCAPERQ9BY12 AL662791.1-201ENST00000441992 928 ntBASIC3.8□□□□□ -1.8
SCAPERQ9BY12 SEPT7P6-201ENST00000469999 1143 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 146.4 ms