Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 LSM1P1-201ENST00000438629 273 ntBASIC4.76□□□□□ -1.65
LRFN3Q9BTN0 DNAJC19P4-201ENST00000440115 345 ntBASIC4.76□□□□□ -1.65
LRFN3Q9BTN0 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.76□□□□□ -1.65
LRFN3Q9BTN0 NANOGNBP1-201ENST00000448444 480 ntBASIC4.76□□□□□ -1.65
LRFN3Q9BTN0 EPS15P1-201ENST00000448836 336 ntBASIC4.76□□□□□ -1.65
LRFN3Q9BTN0 AL162151.2-201ENST00000448875 158 ntBASIC4.76□□□□□ -1.65
LRFN3Q9BTN0 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.76□□□□□ -1.65
LRFN3Q9BTN0 TMED11P-201ENST00000479478 690 ntBASIC4.76□□□□□ -1.65
LRFN3Q9BTN0 VN1R105P-201ENST00000486595 910 ntBASIC4.76□□□□□ -1.65
LRFN3Q9BTN0 RN7SL814P-201ENST00000487715 300 ntBASIC4.76□□□□□ -1.65
LRFN3Q9BTN0 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.76□□□□□ -1.65
LRFN3Q9BTN0 TXNP6-201ENST00000510190 310 ntBASIC4.76□□□□□ -1.65
LRFN3Q9BTN0 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LRFN3Q9BTN0 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.76□□□□□ -1.65
LRFN3Q9BTN0 AC013828.2-201ENST00000532487 235 ntBASIC4.76□□□□□ -1.65
LRFN3Q9BTN0 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.76□□□□□ -1.65
LRFN3Q9BTN0 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.76□□□□□ -1.65
LRFN3Q9BTN0 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
LRFN3Q9BTN0 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.76□□□□□ -1.65
LRFN3Q9BTN0 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC4.76□□□□□ -1.65
LRFN3Q9BTN0 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC4.76□□□□□ -1.65
LRFN3Q9BTN0 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.76□□□□□ -1.65
LRFN3Q9BTN0 NTS-203ENST00000551529 801 ntTSL 3 BASIC4.76□□□□□ -1.65
LRFN3Q9BTN0 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.76□□□□□ -1.65
LRFN3Q9BTN0 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.76□□□□□ -1.65
LRFN3Q9BTN0 RN7SL703P-201ENST00000578485 302 ntBASIC4.76□□□□□ -1.65
LRFN3Q9BTN0 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC4.76□□□□□ -1.65
LRFN3Q9BTN0 AP001180.3-201ENST00000582221 145 ntBASIC4.76□□□□□ -1.65
LRFN3Q9BTN0 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.76□□□□□ -1.65
LRFN3Q9BTN0 AC012065.4-201ENST00000602445 679 ntBASIC4.76□□□□□ -1.65
LRFN3Q9BTN0 AC103710.4-201ENST00000609301 899 ntBASIC4.76□□□□□ -1.65
LRFN3Q9BTN0 MIR6867-201ENST00000610636 67 ntBASIC4.76□□□□□ -1.65
LRFN3Q9BTN0 AC019176.2-201ENST00000611579 315 ntBASIC4.76□□□□□ -1.65
LRFN3Q9BTN0 AC093591.3-201ENST00000634516 308 ntBASIC4.76□□□□□ -1.65
LRFN3Q9BTN0 OR5H6-203ENST00000642105 978 ntBASIC4.76□□□□□ -1.65
LRFN3Q9BTN0 AC004076.2-201ENST00000620532 3323 ntBASIC4.76□□□□□ -1.65
LRFN3Q9BTN0 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.76□□□□□ -1.65
LRFN3Q9BTN0 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC4.76□□□□□ -1.65
LRFN3Q9BTN0 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
LRFN3Q9BTN0 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
LRFN3Q9BTN0 ELF2P3-201ENST00000445099 1506 ntBASIC4.76□□□□□ -1.65
LRFN3Q9BTN0 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.76□□□□□ -1.65
LRFN3Q9BTN0 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
LRFN3Q9BTN0 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
LRFN3Q9BTN0 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.75□□□□□ -1.65
LRFN3Q9BTN0 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
LRFN3Q9BTN0 DCAF13P1-201ENST00000495256 1330 ntBASIC4.75□□□□□ -1.65
LRFN3Q9BTN0 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.75□□□□□ -1.65
LRFN3Q9BTN0 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
LRFN3Q9BTN0 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
LRFN3Q9BTN0 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
LRFN3Q9BTN0 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
LRFN3Q9BTN0 RNU5F-6P-201ENST00000362979 116 ntBASIC4.75□□□□□ -1.65
LRFN3Q9BTN0 RNU6-289P-201ENST00000364093 107 ntBASIC4.75□□□□□ -1.65
LRFN3Q9BTN0 RNU6-348P-201ENST00000384386 107 ntBASIC4.75□□□□□ -1.65
LRFN3Q9BTN0 Y_RNA.554-201ENST00000384672 102 ntBASIC4.75□□□□□ -1.65
LRFN3Q9BTN0 U8.14-201ENST00000390843 143 ntBASIC4.75□□□□□ -1.65
LRFN3Q9BTN0 RN7SKP56-201ENST00000410513 331 ntBASIC4.75□□□□□ -1.65
LRFN3Q9BTN0 RNA5SP345-201ENST00000410646 108 ntBASIC4.75□□□□□ -1.65
LRFN3Q9BTN0 HMGN1P14-201ENST00000412459 517 ntBASIC4.75□□□□□ -1.65
LRFN3Q9BTN0 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.75□□□□□ -1.65
LRFN3Q9BTN0 UBTFL3-201ENST00000418934 1024 ntBASIC4.75□□□□□ -1.65
LRFN3Q9BTN0 Z97055.1-201ENST00000419730 712 ntBASIC4.75□□□□□ -1.65
LRFN3Q9BTN0 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC4.75□□□□□ -1.65
LRFN3Q9BTN0 AL109913.1-201ENST00000421173 514 ntBASIC4.75□□□□□ -1.65
LRFN3Q9BTN0 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.75□□□□□ -1.65
LRFN3Q9BTN0 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.75□□□□□ -1.65
LRFN3Q9BTN0 SDCBPP1-201ENST00000440192 890 ntBASIC4.75□□□□□ -1.65
LRFN3Q9BTN0 LINC02210-201ENST00000444561 288 ntBASIC4.75□□□□□ -1.65
LRFN3Q9BTN0 AC002381.1-201ENST00000447049 280 ntBASIC4.75□□□□□ -1.65
LRFN3Q9BTN0 TPT1P14-201ENST00000448018 505 ntBASIC4.75□□□□□ -1.65
LRFN3Q9BTN0 AC000111.2-201ENST00000448200 210 ntBASIC4.75□□□□□ -1.65
LRFN3Q9BTN0 MTND5P20-201ENST00000448677 143 ntBASIC4.75□□□□□ -1.65
LRFN3Q9BTN0 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC4.75□□□□□ -1.65
LRFN3Q9BTN0 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.75□□□□□ -1.65
LRFN3Q9BTN0 BX322784.1-201ENST00000455793 1077 ntBASIC4.75□□□□□ -1.65
LRFN3Q9BTN0 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC4.75□□□□□ -1.65
LRFN3Q9BTN0 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.75□□□□□ -1.65
LRFN3Q9BTN0 UBTFL6-201ENST00000477929 1024 ntBASIC4.75□□□□□ -1.65
LRFN3Q9BTN0 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.75□□□□□ -1.65
LRFN3Q9BTN0 AC034222.1-201ENST00000494052 532 ntBASIC4.75□□□□□ -1.65
LRFN3Q9BTN0 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.75□□□□□ -1.65
LRFN3Q9BTN0 AC117522.1-201ENST00000509821 380 ntBASIC4.75□□□□□ -1.65
LRFN3Q9BTN0 RPL23AP94-201ENST00000512518 302 ntBASIC4.75□□□□□ -1.65
LRFN3Q9BTN0 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.75□□□□□ -1.65
LRFN3Q9BTN0 Y_RNA.702-201ENST00000516843 96 ntBASIC4.75□□□□□ -1.65
LRFN3Q9BTN0 IGHV3-32-201ENST00000519182 355 ntBASIC4.75□□□□□ -1.65
LRFN3Q9BTN0 TRMT10BP1-201ENST00000519377 943 ntBASIC4.75□□□□□ -1.65
LRFN3Q9BTN0 OR8L1P-201ENST00000534005 955 ntBASIC4.75□□□□□ -1.65
LRFN3Q9BTN0 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.75□□□□□ -1.65
LRFN3Q9BTN0 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC4.75□□□□□ -1.65
LRFN3Q9BTN0 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.75□□□□□ -1.65
LRFN3Q9BTN0 AL390334.1-201ENST00000556395 450 ntBASIC4.75□□□□□ -1.65
LRFN3Q9BTN0 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.75□□□□□ -1.65
LRFN3Q9BTN0 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.75□□□□□ -1.65
LRFN3Q9BTN0 AC037471.2-201ENST00000564941 598 ntBASIC4.75□□□□□ -1.65
LRFN3Q9BTN0 AC090615.1-201ENST00000577519 154 ntBASIC4.75□□□□□ -1.65
LRFN3Q9BTN0 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC4.75□□□□□ -1.65
LRFN3Q9BTN0 AL353997.4-201ENST00000586196 166 ntBASIC4.75□□□□□ -1.65
LRFN3Q9BTN0 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms