Protein–RNA interactions for Protein: Q9BT78

COPS4, COP9 signalosome complex subunit 4, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4Q9BT78 YPEL5P1-201ENST00000419731 367 ntBASIC2.9□□□□□ -1.95
COPS4Q9BT78 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC2.9□□□□□ -1.95
COPS4Q9BT78 AC073508.1-201ENST00000428866 656 ntBASIC2.9□□□□□ -1.95
COPS4Q9BT78 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC2.9□□□□□ -1.95
COPS4Q9BT78 RABEPKP1-201ENST00000440529 1026 ntBASIC2.9□□□□□ -1.95
COPS4Q9BT78 ATP5C1P1-201ENST00000441945 895 ntBASIC2.9□□□□□ -1.95
COPS4Q9BT78 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
COPS4Q9BT78 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC2.9□□□□□ -1.95
COPS4Q9BT78 RN7SL542P-201ENST00000467147 294 ntBASIC2.9□□□□□ -1.95
COPS4Q9BT78 HMGN1P15-201ENST00000513870 295 ntBASIC2.9□□□□□ -1.95
COPS4Q9BT78 SNORD59.2-201ENST00000516873 68 ntBASIC2.9□□□□□ -1.95
COPS4Q9BT78 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
COPS4Q9BT78 AC007536.1-201ENST00000533382 349 ntBASIC2.9□□□□□ -1.95
COPS4Q9BT78 LYZ-203ENST00000549690 669 ntTSL 2 BASIC2.9□□□□□ -1.95
COPS4Q9BT78 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC2.9□□□□□ -1.95
COPS4Q9BT78 MIR4276-201ENST00000584832 70 ntBASIC2.9□□□□□ -1.95
COPS4Q9BT78 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.9□□□□□ -1.95
COPS4Q9BT78 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC2.9□□□□□ -1.95
COPS4Q9BT78 AC006116.7-201ENST00000590141 756 ntBASIC2.9□□□□□ -1.95
COPS4Q9BT78 AP001542.1-201ENST00000591314 200 ntBASIC2.9□□□□□ -1.95
COPS4Q9BT78 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC2.9□□□□□ -1.95
COPS4Q9BT78 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.9□□□□□ -1.95
COPS4Q9BT78 AL162713.1-201ENST00000604480 262 ntBASIC2.9□□□□□ -1.95
COPS4Q9BT78 U3.45-201ENST00000607547 219 ntBASIC2.9□□□□□ -1.95
COPS4Q9BT78 AF117829.1-206ENST00000621883 3802 ntBASIC2.9□□□□□ -1.95
COPS4Q9BT78 AC244258.1-201ENST00000637553 1071 ntBASIC2.9□□□□□ -1.95
COPS4Q9BT78 MAPK10-322ENST00000641485 4530 ntBASIC2.9□□□□□ -1.95
COPS4Q9BT78 AL645568.2-201ENST00000432815 1337 ntBASIC2.9□□□□□ -1.95
COPS4Q9BT78 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
COPS4Q9BT78 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC2.89□□□□□ -1.95
COPS4Q9BT78 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
COPS4Q9BT78 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
COPS4Q9BT78 RNU6-50P-201ENST00000362356 103 ntBASIC2.89□□□□□ -1.95
COPS4Q9BT78 RNA5SP27-201ENST00000363839 119 ntBASIC2.89□□□□□ -1.95
COPS4Q9BT78 RNU6-339P-201ENST00000384310 107 ntBASIC2.89□□□□□ -1.95
COPS4Q9BT78 RNU6-1005P-201ENST00000384519 107 ntBASIC2.89□□□□□ -1.95
COPS4Q9BT78 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC2.89□□□□□ -1.95
COPS4Q9BT78 AC109780.2-201ENST00000413467 845 ntBASIC2.89□□□□□ -1.95
COPS4Q9BT78 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.89□□□□□ -1.95
COPS4Q9BT78 PAICSP7-201ENST00000419829 962 ntBASIC2.89□□□□□ -1.95
COPS4Q9BT78 AL139281.1-201ENST00000422120 335 ntBASIC2.89□□□□□ -1.95
COPS4Q9BT78 AC006548.1-201ENST00000427470 102 ntBASIC2.89□□□□□ -1.95
COPS4Q9BT78 AC104332.2-201ENST00000429959 156 ntBASIC2.89□□□□□ -1.95
COPS4Q9BT78 RPS12P18-201ENST00000442381 270 ntBASIC2.89□□□□□ -1.95
COPS4Q9BT78 RPS26P30-201ENST00000443431 335 ntBASIC2.89□□□□□ -1.95
COPS4Q9BT78 RPL17P49-201ENST00000443728 411 ntBASIC2.89□□□□□ -1.95
COPS4Q9BT78 COX6CP2-201ENST00000444980 225 ntBASIC2.89□□□□□ -1.95
COPS4Q9BT78 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
COPS4Q9BT78 MTND5P8-201ENST00000449817 1083 ntBASIC2.89□□□□□ -1.95
COPS4Q9BT78 RPL26P28-201ENST00000451325 435 ntBASIC2.89□□□□□ -1.95
COPS4Q9BT78 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC2.89□□□□□ -1.95
COPS4Q9BT78 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC2.89□□□□□ -1.95
COPS4Q9BT78 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
COPS4Q9BT78 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.89□□□□□ -1.95
COPS4Q9BT78 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC2.89□□□□□ -1.95
COPS4Q9BT78 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC2.89□□□□□ -1.95
COPS4Q9BT78 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC2.89□□□□□ -1.95
COPS4Q9BT78 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC2.89□□□□□ -1.95
COPS4Q9BT78 AC004217.3-201ENST00000551552 878 ntBASIC2.89□□□□□ -1.95
COPS4Q9BT78 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC2.89□□□□□ -1.95
COPS4Q9BT78 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.89□□□□□ -1.95
COPS4Q9BT78 AC087481.2-201ENST00000565492 330 ntBASIC2.89□□□□□ -1.95
COPS4Q9BT78 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC2.89□□□□□ -1.95
COPS4Q9BT78 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC2.89□□□□□ -1.95
COPS4Q9BT78 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.89□□□□□ -1.95
COPS4Q9BT78 XIAPP1-201ENST00000603162 600 ntBASIC2.89□□□□□ -1.95
COPS4Q9BT78 AC135178.6-201ENST00000605314 398 ntBASIC2.89□□□□□ -1.95
COPS4Q9BT78 HSPE1P14-201ENST00000605812 302 ntBASIC2.89□□□□□ -1.95
COPS4Q9BT78 AL157817.1-201ENST00000614264 790 ntBASIC2.89□□□□□ -1.95
COPS4Q9BT78 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.89□□□□□ -1.95
COPS4Q9BT78 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
COPS4Q9BT78 AC039056.2-201ENST00000622261 511 ntBASIC2.89□□□□□ -1.95
COPS4Q9BT78 CR381572.1-201ENST00000625098 102 ntBASIC2.89□□□□□ -1.95
COPS4Q9BT78 AC084035.1-201ENST00000634543 607 ntBASIC2.89□□□□□ -1.95
COPS4Q9BT78 AL590396.2-201ENST00000636511 1041 ntBASIC2.89□□□□□ -1.95
COPS4Q9BT78 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
COPS4Q9BT78 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
COPS4Q9BT78 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
COPS4Q9BT78 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
COPS4Q9BT78 RNA5SP258-201ENST00000362750 119 ntBASIC2.88□□□□□ -1.95
COPS4Q9BT78 RNU6-989P-201ENST00000362756 107 ntBASIC2.88□□□□□ -1.95
COPS4Q9BT78 Y_RNA.126-201ENST00000363382 111 ntBASIC2.88□□□□□ -1.95
COPS4Q9BT78 RNA5SP50-201ENST00000363731 107 ntBASIC2.88□□□□□ -1.95
COPS4Q9BT78 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
COPS4Q9BT78 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC2.88□□□□□ -1.95
COPS4Q9BT78 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
COPS4Q9BT78 SNORA26.7-201ENST00000391288 122 ntBASIC2.88□□□□□ -1.95
COPS4Q9BT78 RPL31P1-201ENST00000398116 372 ntBASIC2.88□□□□□ -1.95
COPS4Q9BT78 MIR887-201ENST00000401258 79 ntBASIC2.88□□□□□ -1.95
COPS4Q9BT78 FABP12P1-201ENST00000401911 322 ntBASIC2.88□□□□□ -1.95
COPS4Q9BT78 RPL36AP36-201ENST00000418616 301 ntBASIC2.88□□□□□ -1.95
COPS4Q9BT78 HSFY1P1-201ENST00000423928 1178 ntBASIC2.88□□□□□ -1.95
COPS4Q9BT78 AL359073.1-201ENST00000448036 403 ntBASIC2.88□□□□□ -1.95
COPS4Q9BT78 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC2.88□□□□□ -1.95
COPS4Q9BT78 RPL7P38-201ENST00000488396 739 ntBASIC2.88□□□□□ -1.95
COPS4Q9BT78 OR5H5P-201ENST00000503164 928 ntBASIC2.88□□□□□ -1.95
COPS4Q9BT78 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC2.88□□□□□ -1.95
COPS4Q9BT78 AC103833.1-201ENST00000517442 172 ntBASIC2.88□□□□□ -1.95
COPS4Q9BT78 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC2.88□□□□□ -1.95
COPS4Q9BT78 CKS1BP1-201ENST00000555221 240 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms