Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 AC074367.1-201ENST00000438685 1125 ntBASIC2.33□□□□□ -2.04
UPK3BQ9BT76 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC2.33□□□□□ -2.04
UPK3BQ9BT76 RPL26P28-201ENST00000451325 435 ntBASIC2.33□□□□□ -2.04
UPK3BQ9BT76 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
UPK3BQ9BT76 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC2.33□□□□□ -2.04
UPK3BQ9BT76 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC2.33□□□□□ -2.04
UPK3BQ9BT76 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC2.33□□□□□ -2.04
UPK3BQ9BT76 AP000563.1-201ENST00000490865 758 ntBASIC2.33□□□□□ -2.04
UPK3BQ9BT76 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC2.33□□□□□ -2.04
UPK3BQ9BT76 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC2.33□□□□□ -2.04
UPK3BQ9BT76 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC2.33□□□□□ -2.04
UPK3BQ9BT76 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC2.33□□□□□ -2.04
UPK3BQ9BT76 AP003385.6-201ENST00000531603 374 ntBASIC2.33□□□□□ -2.04
UPK3BQ9BT76 AC007536.1-201ENST00000533382 349 ntBASIC2.33□□□□□ -2.04
UPK3BQ9BT76 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC2.33□□□□□ -2.04
UPK3BQ9BT76 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC2.33□□□□□ -2.04
UPK3BQ9BT76 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC2.33□□□□□ -2.04
UPK3BQ9BT76 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC2.33□□□□□ -2.04
UPK3BQ9BT76 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.33□□□□□ -2.04
UPK3BQ9BT76 MIR4276-201ENST00000584832 70 ntBASIC2.33□□□□□ -2.04
UPK3BQ9BT76 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC2.33□□□□□ -2.04
UPK3BQ9BT76 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.33□□□□□ -2.04
UPK3BQ9BT76 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC2.33□□□□□ -2.04
UPK3BQ9BT76 AC103881.1-201ENST00000603476 538 ntBASIC2.33□□□□□ -2.04
UPK3BQ9BT76 AC073657.2-201ENST00000605661 303 ntBASIC2.33□□□□□ -2.04
UPK3BQ9BT76 RDM1-219ENST00000615378 542 ntTSL 3 BASIC2.33□□□□□ -2.04
UPK3BQ9BT76 AC073569.3-201ENST00000619055 682 ntBASIC2.33□□□□□ -2.04
UPK3BQ9BT76 AL590240.3-201ENST00000621416 943 ntBASIC2.33□□□□□ -2.04
UPK3BQ9BT76 AL356490.1-201ENST00000623079 479 ntBASIC2.33□□□□□ -2.04
UPK3BQ9BT76 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC2.33□□□□□ -2.04
UPK3BQ9BT76 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC2.33□□□□□ -2.04
UPK3BQ9BT76 FRG1DP-201ENST00000635586 771 ntBASIC2.33□□□□□ -2.04
UPK3BQ9BT76 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.33□□□□□ -2.04
UPK3BQ9BT76 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.33□□□□□ -2.04
UPK3BQ9BT76 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.33□□□□□ -2.04
UPK3BQ9BT76 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.33□□□□□ -2.04
UPK3BQ9BT76 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
UPK3BQ9BT76 AC004925.1-201ENST00000624256 2706 ntBASIC2.33□□□□□ -2.04
UPK3BQ9BT76 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC2.32□□□□□ -2.04
UPK3BQ9BT76 AL136164.4-201ENST00000625013 2135 ntBASIC2.32□□□□□ -2.04
UPK3BQ9BT76 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
UPK3BQ9BT76 RNA5SP383-201ENST00000362934 120 ntBASIC2.32□□□□□ -2.04
UPK3BQ9BT76 U8.9-201ENST00000365667 134 ntBASIC2.32□□□□□ -2.04
UPK3BQ9BT76 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
UPK3BQ9BT76 CD2-201ENST00000369477 478 ntTSL 2 BASIC2.32□□□□□ -2.04
UPK3BQ9BT76 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
UPK3BQ9BT76 Y_RNA.493-201ENST00000384422 102 ntBASIC2.32□□□□□ -2.04
UPK3BQ9BT76 RNA5SP56-201ENST00000410277 118 ntBASIC2.32□□□□□ -2.04
UPK3BQ9BT76 HSFY4P-201ENST00000415994 1181 ntBASIC2.32□□□□□ -2.04
UPK3BQ9BT76 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC2.32□□□□□ -2.04
UPK3BQ9BT76 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC2.32□□□□□ -2.04
UPK3BQ9BT76 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC2.32□□□□□ -2.04
UPK3BQ9BT76 FAR1P1-201ENST00000427163 934 ntBASIC2.32□□□□□ -2.04
UPK3BQ9BT76 AC114973.1-201ENST00000429057 632 ntBASIC2.32□□□□□ -2.04
UPK3BQ9BT76 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.32□□□□□ -2.04
UPK3BQ9BT76 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC2.32□□□□□ -2.04
UPK3BQ9BT76 RPS3AP12-201ENST00000443616 753 ntBASIC2.32□□□□□ -2.04
UPK3BQ9BT76 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.32□□□□□ -2.04
UPK3BQ9BT76 ANKRD30BP3-201ENST00000444850 1070 ntBASIC2.32□□□□□ -2.04
UPK3BQ9BT76 AC008264.1-201ENST00000447612 367 ntBASIC2.32□□□□□ -2.04
UPK3BQ9BT76 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC2.32□□□□□ -2.04
UPK3BQ9BT76 AC104978.1-201ENST00000449387 391 ntBASIC2.32□□□□□ -2.04
UPK3BQ9BT76 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.32□□□□□ -2.04
UPK3BQ9BT76 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC2.32□□□□□ -2.04
UPK3BQ9BT76 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
UPK3BQ9BT76 AC118282.1-201ENST00000506408 765 ntBASIC2.32□□□□□ -2.04
UPK3BQ9BT76 AC119751.1-201ENST00000513357 765 ntBASIC2.32□□□□□ -2.04
UPK3BQ9BT76 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC2.32□□□□□ -2.04
UPK3BQ9BT76 RNA5SP468-201ENST00000516782 93 ntBASIC2.32□□□□□ -2.04
UPK3BQ9BT76 SNORA31.20-201ENST00000517111 133 ntBASIC2.32□□□□□ -2.04
UPK3BQ9BT76 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.32□□□□□ -2.04
UPK3BQ9BT76 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.32□□□□□ -2.04
UPK3BQ9BT76 ARL1-211ENST00000551828 776 ntTSL 5 BASIC2.32□□□□□ -2.04
UPK3BQ9BT76 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC2.32□□□□□ -2.04
UPK3BQ9BT76 AL157394.1-201ENST00000562983 1224 ntBASIC2.32□□□□□ -2.04
UPK3BQ9BT76 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
UPK3BQ9BT76 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC2.32□□□□□ -2.04
UPK3BQ9BT76 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC2.32□□□□□ -2.04
UPK3BQ9BT76 MIR5195-201ENST00000583555 115 ntBASIC2.32□□□□□ -2.04
UPK3BQ9BT76 DPRXP5-201ENST00000604662 539 ntBASIC2.32□□□□□ -2.04
UPK3BQ9BT76 AC112503.2-201ENST00000609005 552 ntBASIC2.32□□□□□ -2.04
UPK3BQ9BT76 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC2.32□□□□□ -2.04
UPK3BQ9BT76 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC2.32□□□□□ -2.04
UPK3BQ9BT76 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.32□□□□□ -2.04
UPK3BQ9BT76 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
UPK3BQ9BT76 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
UPK3BQ9BT76 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.32□□□□□ -2.04
UPK3BQ9BT76 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
UPK3BQ9BT76 AC010733.2-201ENST00000589496 5702 ntBASIC2.32□□□□□ -2.04
UPK3BQ9BT76 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC2.32□□□□□ -2.04
UPK3BQ9BT76 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
UPK3BQ9BT76 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
UPK3BQ9BT76 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
UPK3BQ9BT76 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC2.31□□□□□ -2.04
UPK3BQ9BT76 AC073073.2-201ENST00000609827 2578 ntBASIC2.31□□□□□ -2.04
UPK3BQ9BT76 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
UPK3BQ9BT76 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC2.31□□□□□ -2.04
UPK3BQ9BT76 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.31□□□□□ -2.04
UPK3BQ9BT76 OR6K3-202ENST00000368146 996 ntBASIC2.31□□□□□ -2.04
UPK3BQ9BT76 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms