Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 HSFY1P1-201ENST00000423928 1178 ntBASIC3.59□□□□□ -1.83
CCM2Q9BSQ5 RPL31P54-201ENST00000429803 370 ntBASIC3.59□□□□□ -1.83
CCM2Q9BSQ5 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.59□□□□□ -1.83
CCM2Q9BSQ5 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.59□□□□□ -1.83
CCM2Q9BSQ5 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CCM2Q9BSQ5 RPL23AP16-201ENST00000441715 421 ntBASIC3.59□□□□□ -1.83
CCM2Q9BSQ5 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.59□□□□□ -1.83
CCM2Q9BSQ5 Z95327.1-201ENST00000446082 482 ntBASIC3.59□□□□□ -1.83
CCM2Q9BSQ5 MTCO3P16-201ENST00000454456 754 ntBASIC3.59□□□□□ -1.83
CCM2Q9BSQ5 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.59□□□□□ -1.83
CCM2Q9BSQ5 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CCM2Q9BSQ5 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.59□□□□□ -1.83
CCM2Q9BSQ5 RN7SKP18-201ENST00000516005 275 ntBASIC3.59□□□□□ -1.83
CCM2Q9BSQ5 TRMT10BP1-201ENST00000519377 943 ntBASIC3.59□□□□□ -1.83
CCM2Q9BSQ5 RANP9-201ENST00000519957 271 ntBASIC3.59□□□□□ -1.83
CCM2Q9BSQ5 OR4A45P-201ENST00000529954 901 ntBASIC3.59□□□□□ -1.83
CCM2Q9BSQ5 ZNF705CP-201ENST00000530515 889 ntBASIC3.59□□□□□ -1.83
CCM2Q9BSQ5 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
CCM2Q9BSQ5 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC3.59□□□□□ -1.83
CCM2Q9BSQ5 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC3.59□□□□□ -1.83
CCM2Q9BSQ5 AC023813.2-201ENST00000564321 469 ntBASIC3.59□□□□□ -1.83
CCM2Q9BSQ5 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.59□□□□□ -1.83
CCM2Q9BSQ5 AL390838.2-201ENST00000602394 274 ntBASIC3.59□□□□□ -1.83
CCM2Q9BSQ5 MTND3P19-201ENST00000603825 345 ntBASIC3.59□□□□□ -1.83
CCM2Q9BSQ5 AL035411.2-201ENST00000604022 421 ntBASIC3.59□□□□□ -1.83
CCM2Q9BSQ5 AC025588.3-201ENST00000604182 274 ntBASIC3.59□□□□□ -1.83
CCM2Q9BSQ5 AC016877.3-201ENST00000606778 504 ntBASIC3.59□□□□□ -1.83
CCM2Q9BSQ5 AC022509.4-201ENST00000621404 572 ntBASIC3.59□□□□□ -1.83
CCM2Q9BSQ5 AL732618.1-201ENST00000623251 301 ntBASIC3.59□□□□□ -1.83
CCM2Q9BSQ5 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CCM2Q9BSQ5 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CCM2Q9BSQ5 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CCM2Q9BSQ5 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.84
CCM2Q9BSQ5 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCM2Q9BSQ5 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCM2Q9BSQ5 ZNF285B-201ENST00000561698 1767 ntBASIC3.58□□□□□ -1.84
CCM2Q9BSQ5 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCM2Q9BSQ5 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCM2Q9BSQ5 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CCM2Q9BSQ5 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CCM2Q9BSQ5 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCM2Q9BSQ5 RNA5SP124-201ENST00000362739 110 ntBASIC3.58□□□□□ -1.84
CCM2Q9BSQ5 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCM2Q9BSQ5 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.58□□□□□ -1.84
CCM2Q9BSQ5 AL359837.1-201ENST00000381357 287 ntBASIC3.58□□□□□ -1.84
CCM2Q9BSQ5 HSPE1P26-201ENST00000405341 275 ntBASIC3.58□□□□□ -1.84
CCM2Q9BSQ5 AL355379.1-201ENST00000405542 640 ntBASIC3.58□□□□□ -1.84
CCM2Q9BSQ5 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.58□□□□□ -1.84
CCM2Q9BSQ5 AL356320.2-201ENST00000417263 507 ntBASIC3.58□□□□□ -1.84
CCM2Q9BSQ5 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.58□□□□□ -1.84
CCM2Q9BSQ5 AL513175.2-201ENST00000422071 443 ntBASIC3.58□□□□□ -1.84
CCM2Q9BSQ5 SETP5-201ENST00000437270 562 ntBASIC3.58□□□□□ -1.84
CCM2Q9BSQ5 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.58□□□□□ -1.84
CCM2Q9BSQ5 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.58□□□□□ -1.84
CCM2Q9BSQ5 AC007327.1-201ENST00000447461 264 ntBASIC3.58□□□□□ -1.84
CCM2Q9BSQ5 MTCO1P48-201ENST00000448024 1096 ntBASIC3.58□□□□□ -1.84
CCM2Q9BSQ5 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.58□□□□□ -1.84
CCM2Q9BSQ5 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.58□□□□□ -1.84
CCM2Q9BSQ5 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.58□□□□□ -1.84
CCM2Q9BSQ5 AL136126.1-201ENST00000473603 402 ntBASIC3.58□□□□□ -1.84
CCM2Q9BSQ5 OR4G11P-201ENST00000492842 939 ntBASIC3.58□□□□□ -1.84
CCM2Q9BSQ5 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.58□□□□□ -1.84
CCM2Q9BSQ5 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC3.58□□□□□ -1.84
CCM2Q9BSQ5 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.58□□□□□ -1.84
CCM2Q9BSQ5 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.58□□□□□ -1.84
CCM2Q9BSQ5 IGKV2D-36-201ENST00000518643 226 ntBASIC3.58□□□□□ -1.84
CCM2Q9BSQ5 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.58□□□□□ -1.84
CCM2Q9BSQ5 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC3.58□□□□□ -1.84
CCM2Q9BSQ5 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.58□□□□□ -1.84
CCM2Q9BSQ5 AC023161.2-201ENST00000551218 780 ntBASIC3.58□□□□□ -1.84
CCM2Q9BSQ5 AADACP1-206ENST00000561502 1193 ntBASIC3.58□□□□□ -1.84
CCM2Q9BSQ5 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.58□□□□□ -1.84
CCM2Q9BSQ5 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.58□□□□□ -1.84
CCM2Q9BSQ5 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.58□□□□□ -1.84
CCM2Q9BSQ5 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.58□□□□□ -1.84
CCM2Q9BSQ5 KLKP1-201ENST00000595979 403 ntBASIC3.58□□□□□ -1.84
CCM2Q9BSQ5 AL513477.2-201ENST00000607858 568 ntBASIC3.58□□□□□ -1.84
CCM2Q9BSQ5 AC005332.6-201ENST00000613178 446 ntBASIC3.58□□□□□ -1.84
CCM2Q9BSQ5 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.58□□□□□ -1.84
CCM2Q9BSQ5 AC091046.2-201ENST00000620775 665 ntBASIC3.58□□□□□ -1.84
CCM2Q9BSQ5 AC039056.2-201ENST00000622261 511 ntBASIC3.58□□□□□ -1.84
CCM2Q9BSQ5 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.58□□□□□ -1.84
CCM2Q9BSQ5 AL732372.2-225ENST00000642124 456 ntBASIC3.58□□□□□ -1.84
CCM2Q9BSQ5 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CCM2Q9BSQ5 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CCM2Q9BSQ5 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCM2Q9BSQ5 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.58□□□□□ -1.84
CCM2Q9BSQ5 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCM2Q9BSQ5 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCM2Q9BSQ5 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.57□□□□□ -1.84
CCM2Q9BSQ5 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.57□□□□□ -1.84
CCM2Q9BSQ5 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CCM2Q9BSQ5 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CCM2Q9BSQ5 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
CCM2Q9BSQ5 RNU6-374P-201ENST00000364146 108 ntBASIC3.57□□□□□ -1.84
CCM2Q9BSQ5 RNVU1-3-201ENST00000364313 161 ntBASIC3.57□□□□□ -1.84
CCM2Q9BSQ5 RNU6-657P-201ENST00000383904 107 ntBASIC3.57□□□□□ -1.84
CCM2Q9BSQ5 SNORA5A-201ENST00000384111 134 ntBASIC3.57□□□□□ -1.84
CCM2Q9BSQ5 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
CCM2Q9BSQ5 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms