Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TRIM56Q9BRZ2 RNU6-1046P-201ENST00000516538 107 ntBASIC5.61□□□□□ -1.51
TRIM56Q9BRZ2 RN7SKP219-201ENST00000516825 296 ntBASIC5.61□□□□□ -1.51
TRIM56Q9BRZ2 NARSP2-201ENST00000518524 679 ntBASIC5.61□□□□□ -1.51
TRIM56Q9BRZ2 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC5.61□□□□□ -1.51
TRIM56Q9BRZ2 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC5.61□□□□□ -1.51
TRIM56Q9BRZ2 AC018630.1-201ENST00000541376 925 ntBASIC5.61□□□□□ -1.51
TRIM56Q9BRZ2 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.61□□□□□ -1.51
TRIM56Q9BRZ2 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC5.61□□□□□ -1.51
TRIM56Q9BRZ2 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.61□□□□□ -1.51
TRIM56Q9BRZ2 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC5.61□□□□□ -1.51
TRIM56Q9BRZ2 AL163153.1-201ENST00000554223 283 ntBASIC5.61□□□□□ -1.51
TRIM56Q9BRZ2 AC107027.3-201ENST00000565095 3473 ntBASIC5.61□□□□□ -1.51
TRIM56Q9BRZ2 MIR4311-201ENST00000580794 100 ntBASIC5.61□□□□□ -1.51
TRIM56Q9BRZ2 AC100830.2-201ENST00000581636 240 ntBASIC5.61□□□□□ -1.51
TRIM56Q9BRZ2 AC025574.2-201ENST00000615621 514 ntBASIC5.61□□□□□ -1.51
TRIM56Q9BRZ2 RN7SL544P-201ENST00000617232 284 ntBASIC5.61□□□□□ -1.51
TRIM56Q9BRZ2 RN7SL763P-201ENST00000620922 284 ntBASIC5.61□□□□□ -1.51
TRIM56Q9BRZ2 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.61□□□□□ -1.51
TRIM56Q9BRZ2 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC5.61□□□□□ -1.51
TRIM56Q9BRZ2 AL138713.1-201ENST00000624026 2130 ntBASIC5.61□□□□□ -1.51
TRIM56Q9BRZ2 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.61□□□□□ -1.51
TRIM56Q9BRZ2 OR13C1P-202ENST00000641378 2919 ntBASIC5.61□□□□□ -1.51
TRIM56Q9BRZ2 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
TRIM56Q9BRZ2 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
TRIM56Q9BRZ2 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TRIM56Q9BRZ2 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TRIM56Q9BRZ2 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.61□□□□□ -1.51
TRIM56Q9BRZ2 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM56Q9BRZ2 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM56Q9BRZ2 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.6□□□□□ -1.51
TRIM56Q9BRZ2 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.6□□□□□ -1.51
TRIM56Q9BRZ2 IQCB2P-201ENST00000401788 1633 ntBASIC5.6□□□□□ -1.51
TRIM56Q9BRZ2 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM56Q9BRZ2 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.6□□□□□ -1.51
TRIM56Q9BRZ2 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM56Q9BRZ2 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM56Q9BRZ2 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM56Q9BRZ2 AC092681.1-201ENST00000297369 291 ntBASIC5.6□□□□□ -1.51
TRIM56Q9BRZ2 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
TRIM56Q9BRZ2 RNU6-249P-201ENST00000363016 102 ntBASIC5.6□□□□□ -1.51
TRIM56Q9BRZ2 Y_RNA.133-201ENST00000363428 110 ntBASIC5.6□□□□□ -1.51
TRIM56Q9BRZ2 RNY3P13-201ENST00000365542 102 ntBASIC5.6□□□□□ -1.51
TRIM56Q9BRZ2 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM56Q9BRZ2 Y_RNA.414-201ENST00000384011 101 ntBASIC5.6□□□□□ -1.51
TRIM56Q9BRZ2 RNU6-38P-201ENST00000384085 107 ntBASIC5.6□□□□□ -1.51
TRIM56Q9BRZ2 MIR558-201ENST00000384920 94 ntBASIC5.6□□□□□ -1.51
TRIM56Q9BRZ2 MTCYBP4-201ENST00000401524 249 ntBASIC5.6□□□□□ -1.51
TRIM56Q9BRZ2 HMGN1P24-201ENST00000412282 298 ntBASIC5.6□□□□□ -1.51
TRIM56Q9BRZ2 OR6C66P-201ENST00000414917 930 ntBASIC5.6□□□□□ -1.51
TRIM56Q9BRZ2 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.6□□□□□ -1.51
TRIM56Q9BRZ2 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.6□□□□□ -1.51
TRIM56Q9BRZ2 RPL34P3-201ENST00000421454 338 ntBASIC5.6□□□□□ -1.51
TRIM56Q9BRZ2 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC5.6□□□□□ -1.51
TRIM56Q9BRZ2 BRWD1P3-201ENST00000428816 390 ntBASIC5.6□□□□□ -1.51
TRIM56Q9BRZ2 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.6□□□□□ -1.51
TRIM56Q9BRZ2 AC108059.2-201ENST00000434626 151 ntBASIC5.6□□□□□ -1.51
TRIM56Q9BRZ2 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.6□□□□□ -1.51
TRIM56Q9BRZ2 AP006222.1-205ENST00000450734 457 ntBASIC5.6□□□□□ -1.51
TRIM56Q9BRZ2 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.6□□□□□ -1.51
TRIM56Q9BRZ2 AC107399.1-201ENST00000451226 265 ntBASIC5.6□□□□□ -1.51
TRIM56Q9BRZ2 RNU6-333P-201ENST00000459117 107 ntBASIC5.6□□□□□ -1.51
TRIM56Q9BRZ2 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.6□□□□□ -1.51
TRIM56Q9BRZ2 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC5.6□□□□□ -1.51
TRIM56Q9BRZ2 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.6□□□□□ -1.51
TRIM56Q9BRZ2 AC016065.2-201ENST00000514530 444 ntBASIC5.6□□□□□ -1.51
TRIM56Q9BRZ2 RNU6-864P-201ENST00000516256 108 ntBASIC5.6□□□□□ -1.51
TRIM56Q9BRZ2 RN7SKP82-201ENST00000516786 223 ntBASIC5.6□□□□□ -1.51
TRIM56Q9BRZ2 DERA-209ENST00000532964 854 ntTSL 5 BASIC5.6□□□□□ -1.51
TRIM56Q9BRZ2 AC079600.1-201ENST00000550326 297 ntBASIC5.6□□□□□ -1.51
TRIM56Q9BRZ2 LSM3P2-201ENST00000551246 273 ntBASIC5.6□□□□□ -1.51
TRIM56Q9BRZ2 AL359219.2-201ENST00000555184 348 ntBASIC5.6□□□□□ -1.51
TRIM56Q9BRZ2 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC5.6□□□□□ -1.51
TRIM56Q9BRZ2 COX6CP3-201ENST00000580869 223 ntBASIC5.6□□□□□ -1.51
TRIM56Q9BRZ2 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM56Q9BRZ2 AC011477.5-201ENST00000586571 259 ntBASIC5.6□□□□□ -1.51
TRIM56Q9BRZ2 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.6□□□□□ -1.51
TRIM56Q9BRZ2 AC124303.1-201ENST00000605703 360 ntBASIC5.6□□□□□ -1.51
TRIM56Q9BRZ2 AC019193.3-201ENST00000609144 554 ntBASIC5.6□□□□□ -1.51
TRIM56Q9BRZ2 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM56Q9BRZ2 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
TRIM56Q9BRZ2 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.6□□□□□ -1.51
TRIM56Q9BRZ2 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM56Q9BRZ2 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
TRIM56Q9BRZ2 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM56Q9BRZ2 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM56Q9BRZ2 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM56Q9BRZ2 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM56Q9BRZ2 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.6□□□□□ -1.51
TRIM56Q9BRZ2 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.6□□□□□ -1.51
TRIM56Q9BRZ2 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM56Q9BRZ2 MAPK10-338ENST00000641647 3362 ntBASIC5.59□□□□□ -1.51
TRIM56Q9BRZ2 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
TRIM56Q9BRZ2 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
TRIM56Q9BRZ2 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TRIM56Q9BRZ2 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TRIM56Q9BRZ2 U3.11-201ENST00000364476 212 ntBASIC5.59□□□□□ -1.51
TRIM56Q9BRZ2 Y_RNA.301-201ENST00000364990 103 ntBASIC5.59□□□□□ -1.51
TRIM56Q9BRZ2 SNORA22B-201ENST00000383876 138 ntBASIC5.59□□□□□ -1.51
TRIM56Q9BRZ2 RNU2-29P-201ENST00000410423 189 ntBASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms