Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.36□□□□□ -1.71
PAAF1Q9BRP4 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.36□□□□□ -1.71
PAAF1Q9BRP4 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.36□□□□□ -1.71
PAAF1Q9BRP4 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC4.36□□□□□ -1.71
PAAF1Q9BRP4 POU5F1P7-201ENST00000508759 541 ntBASIC4.36□□□□□ -1.71
PAAF1Q9BRP4 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
PAAF1Q9BRP4 AC093809.1-201ENST00000509155 340 ntBASIC4.36□□□□□ -1.71
PAAF1Q9BRP4 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.36□□□□□ -1.71
PAAF1Q9BRP4 AC100770.1-201ENST00000532310 322 ntBASIC4.36□□□□□ -1.71
PAAF1Q9BRP4 AC068587.4-201ENST00000533893 186 ntBASIC4.36□□□□□ -1.71
PAAF1Q9BRP4 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC4.36□□□□□ -1.71
PAAF1Q9BRP4 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.36□□□□□ -1.71
PAAF1Q9BRP4 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.36□□□□□ -1.71
PAAF1Q9BRP4 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.36□□□□□ -1.71
PAAF1Q9BRP4 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.36□□□□□ -1.71
PAAF1Q9BRP4 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
PAAF1Q9BRP4 HSPE1P5-201ENST00000561489 272 ntBASIC4.36□□□□□ -1.71
PAAF1Q9BRP4 MIR4458-201ENST00000578872 75 ntBASIC4.36□□□□□ -1.71
PAAF1Q9BRP4 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.36□□□□□ -1.71
PAAF1Q9BRP4 AC103591.3-201ENST00000608684 209 ntBASIC4.36□□□□□ -1.71
PAAF1Q9BRP4 AC006133.1-201ENST00000617106 264 ntBASIC4.36□□□□□ -1.71
PAAF1Q9BRP4 AC009878.1-201ENST00000621819 340 ntBASIC4.36□□□□□ -1.71
PAAF1Q9BRP4 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC4.36□□□□□ -1.71
PAAF1Q9BRP4 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC4.36□□□□□ -1.71
PAAF1Q9BRP4 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
PAAF1Q9BRP4 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PAAF1Q9BRP4 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.36□□□□□ -1.71
PAAF1Q9BRP4 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PAAF1Q9BRP4 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PAAF1Q9BRP4 AP001642.1-201ENST00000624727 2117 ntBASIC4.36□□□□□ -1.71
PAAF1Q9BRP4 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
PAAF1Q9BRP4 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
PAAF1Q9BRP4 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
PAAF1Q9BRP4 AC139713.2-215ENST00000641428 5037 ntBASIC4.35□□□□□ -1.71
PAAF1Q9BRP4 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PAAF1Q9BRP4 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PAAF1Q9BRP4 MIR23B-201ENST00000384832 97 ntBASIC4.35□□□□□ -1.71
PAAF1Q9BRP4 RNU6-952P-201ENST00000391164 108 ntBASIC4.35□□□□□ -1.71
PAAF1Q9BRP4 RPS24P12-201ENST00000402084 394 ntBASIC4.35□□□□□ -1.71
PAAF1Q9BRP4 MTCYBP36-201ENST00000404146 440 ntBASIC4.35□□□□□ -1.71
PAAF1Q9BRP4 RN7SKP159-201ENST00000410657 292 ntBASIC4.35□□□□□ -1.71
PAAF1Q9BRP4 TPMTP2-201ENST00000414372 726 ntBASIC4.35□□□□□ -1.71
PAAF1Q9BRP4 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC4.35□□□□□ -1.71
PAAF1Q9BRP4 MTCO2P34-201ENST00000421994 607 ntBASIC4.35□□□□□ -1.71
PAAF1Q9BRP4 RPS27AP14-201ENST00000422868 454 ntBASIC4.35□□□□□ -1.71
PAAF1Q9BRP4 GLRXP1-201ENST00000423261 334 ntBASIC4.35□□□□□ -1.71
PAAF1Q9BRP4 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC4.35□□□□□ -1.71
PAAF1Q9BRP4 AL512649.1-201ENST00000428997 581 ntBASIC4.35□□□□□ -1.71
PAAF1Q9BRP4 AL445584.1-201ENST00000431451 330 ntBASIC4.35□□□□□ -1.71
PAAF1Q9BRP4 AL353706.1-201ENST00000436728 494 ntBASIC4.35□□□□□ -1.71
PAAF1Q9BRP4 RPL23AP89-201ENST00000439324 255 ntBASIC4.35□□□□□ -1.71
PAAF1Q9BRP4 MTND6P18-201ENST00000439477 513 ntBASIC4.35□□□□□ -1.71
PAAF1Q9BRP4 MTND5P14-201ENST00000441481 1267 ntBASIC4.35□□□□□ -1.71
PAAF1Q9BRP4 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.35□□□□□ -1.71
PAAF1Q9BRP4 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC4.35□□□□□ -1.71
PAAF1Q9BRP4 USP9YP34-201ENST00000453983 808 ntBASIC4.35□□□□□ -1.71
PAAF1Q9BRP4 DNAJC19P1-201ENST00000455312 319 ntBASIC4.35□□□□□ -1.71
PAAF1Q9BRP4 BX322784.1-201ENST00000455793 1077 ntBASIC4.35□□□□□ -1.71
PAAF1Q9BRP4 AC110792.1-201ENST00000491826 472 ntBASIC4.35□□□□□ -1.71
PAAF1Q9BRP4 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC4.35□□□□□ -1.71
PAAF1Q9BRP4 SLC25A15P5-201ENST00000508033 253 ntBASIC4.35□□□□□ -1.71
PAAF1Q9BRP4 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC4.35□□□□□ -1.71
PAAF1Q9BRP4 AC024589.1-201ENST00000512207 263 ntBASIC4.35□□□□□ -1.71
PAAF1Q9BRP4 RNU7-143P-201ENST00000516781 65 ntBASIC4.35□□□□□ -1.71
PAAF1Q9BRP4 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4.35□□□□□ -1.71
PAAF1Q9BRP4 AL139174.1-201ENST00000531489 886 ntBASIC4.35□□□□□ -1.71
PAAF1Q9BRP4 AP004247.1-201ENST00000531556 1289 ntBASIC4.35□□□□□ -1.71
PAAF1Q9BRP4 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.35□□□□□ -1.71
PAAF1Q9BRP4 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.35□□□□□ -1.71
PAAF1Q9BRP4 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC4.35□□□□□ -1.71
PAAF1Q9BRP4 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.35□□□□□ -1.71
PAAF1Q9BRP4 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.35□□□□□ -1.71
PAAF1Q9BRP4 AC025627.2-201ENST00000576220 160 ntBASIC4.35□□□□□ -1.71
PAAF1Q9BRP4 AC090312.1-201ENST00000580637 348 ntBASIC4.35□□□□□ -1.71
PAAF1Q9BRP4 MIR3158-1-201ENST00000583596 81 ntBASIC4.35□□□□□ -1.71
PAAF1Q9BRP4 MIR3611-201ENST00000584484 83 ntBASIC4.35□□□□□ -1.71
PAAF1Q9BRP4 ABBA01006766.1-201ENST00000584728 294 ntBASIC4.35□□□□□ -1.71
PAAF1Q9BRP4 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC4.35□□□□□ -1.71
PAAF1Q9BRP4 AC067852.4-201ENST00000590314 478 ntBASIC4.35□□□□□ -1.71
PAAF1Q9BRP4 PRELID3BP8-201ENST00000604148 295 ntBASIC4.35□□□□□ -1.71
PAAF1Q9BRP4 AP000254.1-201ENST00000609934 520 ntBASIC4.35□□□□□ -1.71
PAAF1Q9BRP4 AL356121.2-201ENST00000624715 780 ntBASIC4.35□□□□□ -1.71
PAAF1Q9BRP4 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.35□□□□□ -1.71
PAAF1Q9BRP4 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.35□□□□□ -1.71
PAAF1Q9BRP4 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.35□□□□□ -1.71
PAAF1Q9BRP4 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
PAAF1Q9BRP4 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PAAF1Q9BRP4 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PAAF1Q9BRP4 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
PAAF1Q9BRP4 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PAAF1Q9BRP4 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.35□□□□□ -1.71
PAAF1Q9BRP4 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PAAF1Q9BRP4 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
PAAF1Q9BRP4 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PAAF1Q9BRP4 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
PAAF1Q9BRP4 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
PAAF1Q9BRP4 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PAAF1Q9BRP4 RNU6-213P-201ENST00000384051 104 ntBASIC4.34□□□□□ -1.71
PAAF1Q9BRP4 Y_RNA.559-201ENST00000384686 107 ntBASIC4.34□□□□□ -1.71
PAAF1Q9BRP4 MIR554-201ENST00000384874 96 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms