Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 AL356863.1-201ENST00000623378 1080 ntBASIC3.16□□□□□ -1.9
EBF4Q9BQW3 AC097520.1-201ENST00000624435 385 ntBASIC3.16□□□□□ -1.9
EBF4Q9BQW3 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC3.16□□□□□ -1.9
EBF4Q9BQW3 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.16□□□□□ -1.9
EBF4Q9BQW3 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
EBF4Q9BQW3 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
EBF4Q9BQW3 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
EBF4Q9BQW3 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
EBF4Q9BQW3 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
EBF4Q9BQW3 RNU4-35P-201ENST00000362588 141 ntBASIC3.15□□□□□ -1.91
EBF4Q9BQW3 RNU6-236P-201ENST00000363886 106 ntBASIC3.15□□□□□ -1.91
EBF4Q9BQW3 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
EBF4Q9BQW3 AC068538.1-201ENST00000376856 336 ntBASIC3.15□□□□□ -1.91
EBF4Q9BQW3 MIR591-201ENST00000385290 95 ntBASIC3.15□□□□□ -1.91
EBF4Q9BQW3 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.15□□□□□ -1.91
EBF4Q9BQW3 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.15□□□□□ -1.91
EBF4Q9BQW3 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC3.15□□□□□ -1.91
EBF4Q9BQW3 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.15□□□□□ -1.91
EBF4Q9BQW3 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.15□□□□□ -1.91
EBF4Q9BQW3 AC245054.2-201ENST00000415639 319 ntBASIC3.15□□□□□ -1.91
EBF4Q9BQW3 AC008280.1-201ENST00000418851 412 ntBASIC3.15□□□□□ -1.91
EBF4Q9BQW3 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.15□□□□□ -1.91
EBF4Q9BQW3 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.15□□□□□ -1.91
EBF4Q9BQW3 CYCSP43-201ENST00000438233 310 ntBASIC3.15□□□□□ -1.91
EBF4Q9BQW3 PTGES3P1-201ENST00000439531 483 ntBASIC3.15□□□□□ -1.91
EBF4Q9BQW3 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.15□□□□□ -1.91
EBF4Q9BQW3 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
EBF4Q9BQW3 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC3.15□□□□□ -1.91
EBF4Q9BQW3 UQCRHP3-201ENST00000451503 251 ntBASIC3.15□□□□□ -1.91
EBF4Q9BQW3 BX276092.4-201ENST00000452056 248 ntBASIC3.15□□□□□ -1.91
EBF4Q9BQW3 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC3.15□□□□□ -1.91
EBF4Q9BQW3 SBDSP1-204ENST00000453858 737 ntBASIC3.15□□□□□ -1.91
EBF4Q9BQW3 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC3.15□□□□□ -1.91
EBF4Q9BQW3 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
EBF4Q9BQW3 AC092185.1-201ENST00000491371 97 ntBASIC3.15□□□□□ -1.91
EBF4Q9BQW3 AC005726.1-201ENST00000494679 427 ntBASIC3.15□□□□□ -1.91
EBF4Q9BQW3 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.15□□□□□ -1.91
EBF4Q9BQW3 FCF1P8-201ENST00000510322 597 ntBASIC3.15□□□□□ -1.91
EBF4Q9BQW3 NPM1P41-201ENST00000512920 831 ntBASIC3.15□□□□□ -1.91
EBF4Q9BQW3 RNU6-488P-201ENST00000515918 99 ntBASIC3.15□□□□□ -1.91
EBF4Q9BQW3 RNU6-1028P-201ENST00000517164 93 ntBASIC3.15□□□□□ -1.91
EBF4Q9BQW3 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
EBF4Q9BQW3 AC021451.1-201ENST00000523498 1129 ntBASIC3.15□□□□□ -1.91
EBF4Q9BQW3 NDUFS5P6-201ENST00000529136 295 ntBASIC3.15□□□□□ -1.91
EBF4Q9BQW3 AC103843.2-201ENST00000530523 682 ntBASIC3.15□□□□□ -1.91
EBF4Q9BQW3 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.15□□□□□ -1.91
EBF4Q9BQW3 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.15□□□□□ -1.91
EBF4Q9BQW3 AP004242.1-201ENST00000533701 349 ntBASIC3.15□□□□□ -1.91
EBF4Q9BQW3 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC3.15□□□□□ -1.91
EBF4Q9BQW3 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.15□□□□□ -1.91
EBF4Q9BQW3 MIR4666A-201ENST00000580160 79 ntBASIC3.15□□□□□ -1.91
EBF4Q9BQW3 YWHAQP7-201ENST00000603536 658 ntBASIC3.15□□□□□ -1.91
EBF4Q9BQW3 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.15□□□□□ -1.91
EBF4Q9BQW3 BX323046.1-201ENST00000610145 535 ntBASIC3.15□□□□□ -1.91
EBF4Q9BQW3 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
EBF4Q9BQW3 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
EBF4Q9BQW3 AL365440.1-201ENST00000436135 2167 ntBASIC3.15□□□□□ -1.91
EBF4Q9BQW3 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
EBF4Q9BQW3 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
EBF4Q9BQW3 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
EBF4Q9BQW3 RNU6-1243P-201ENST00000364028 107 ntBASIC3.14□□□□□ -1.91
EBF4Q9BQW3 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.14□□□□□ -1.91
EBF4Q9BQW3 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.14□□□□□ -1.91
EBF4Q9BQW3 RNU6-444P-201ENST00000383988 108 ntBASIC3.14□□□□□ -1.91
EBF4Q9BQW3 SNORA48.8-201ENST00000391324 134 ntBASIC3.14□□□□□ -1.91
EBF4Q9BQW3 HSPE1P26-201ENST00000405341 275 ntBASIC3.14□□□□□ -1.91
EBF4Q9BQW3 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.14□□□□□ -1.91
EBF4Q9BQW3 AL807761.1-201ENST00000417622 171 ntBASIC3.14□□□□□ -1.91
EBF4Q9BQW3 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC3.14□□□□□ -1.91
EBF4Q9BQW3 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
EBF4Q9BQW3 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.14□□□□□ -1.91
EBF4Q9BQW3 EXOSC3P1-201ENST00000448649 500 ntBASIC3.14□□□□□ -1.91
EBF4Q9BQW3 COX6CP18-201ENST00000448769 222 ntBASIC3.14□□□□□ -1.91
EBF4Q9BQW3 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC3.14□□□□□ -1.91
EBF4Q9BQW3 RN7SL132P-201ENST00000478131 296 ntBASIC3.14□□□□□ -1.91
EBF4Q9BQW3 AC114322.1-201ENST00000506771 926 ntBASIC3.14□□□□□ -1.91
EBF4Q9BQW3 RN7SKP18-201ENST00000516005 275 ntBASIC3.14□□□□□ -1.91
EBF4Q9BQW3 AC023632.1-201ENST00000518463 375 ntBASIC3.14□□□□□ -1.91
EBF4Q9BQW3 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.14□□□□□ -1.91
EBF4Q9BQW3 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.14□□□□□ -1.91
EBF4Q9BQW3 MTCO3P15-201ENST00000526563 574 ntBASIC3.14□□□□□ -1.91
EBF4Q9BQW3 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3.14□□□□□ -1.91
EBF4Q9BQW3 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.14□□□□□ -1.91
EBF4Q9BQW3 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.14□□□□□ -1.91
EBF4Q9BQW3 AC074029.1-201ENST00000552531 1044 ntBASIC3.14□□□□□ -1.91
EBF4Q9BQW3 AC044913.1-201ENST00000557200 430 ntBASIC3.14□□□□□ -1.91
EBF4Q9BQW3 MTCYBP28-201ENST00000566728 1132 ntBASIC3.14□□□□□ -1.91
EBF4Q9BQW3 MIR4504-201ENST00000577413 92 ntBASIC3.14□□□□□ -1.91
EBF4Q9BQW3 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.14□□□□□ -1.91
EBF4Q9BQW3 AC112220.2-201ENST00000605513 533 ntBASIC3.14□□□□□ -1.91
EBF4Q9BQW3 AL583856.2-201ENST00000606298 543 ntBASIC3.14□□□□□ -1.91
EBF4Q9BQW3 SNORA51-201ENST00000606420 132 ntBASIC3.14□□□□□ -1.91
EBF4Q9BQW3 MIR7851-201ENST00000610611 160 ntBASIC3.14□□□□□ -1.91
EBF4Q9BQW3 AC083809.1-201ENST00000615051 472 ntBASIC3.14□□□□□ -1.91
EBF4Q9BQW3 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.14□□□□□ -1.91
EBF4Q9BQW3 PLCE1P1-201ENST00000622094 305 ntBASIC3.14□□□□□ -1.91
EBF4Q9BQW3 AC048347.1-201ENST00000624621 427 ntBASIC3.14□□□□□ -1.91
EBF4Q9BQW3 FAM157B-203ENST00000639350 358 ntBASIC3.14□□□□□ -1.91
EBF4Q9BQW3 AC008264.2-201ENST00000610193 3731 ntBASIC3.14□□□□□ -1.91
EBF4Q9BQW3 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 130.8 ms