Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
USB1Q9BQ65 MTND5P9-201ENST00000503854 1755 ntBASIC6.02□□□□□ -1.45
USB1Q9BQ65 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
USB1Q9BQ65 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
USB1Q9BQ65 MAPK10-344ENST00000641718 3746 ntBASIC6.02□□□□□ -1.45
USB1Q9BQ65 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
USB1Q9BQ65 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC6.02□□□□□ -1.45
USB1Q9BQ65 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
USB1Q9BQ65 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
USB1Q9BQ65 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
USB1Q9BQ65 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
USB1Q9BQ65 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.01□□□□□ -1.45
USB1Q9BQ65 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
USB1Q9BQ65 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC6.01□□□□□ -1.45
USB1Q9BQ65 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
USB1Q9BQ65 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
USB1Q9BQ65 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC6.01□□□□□ -1.45
USB1Q9BQ65 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
USB1Q9BQ65 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
USB1Q9BQ65 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
USB1Q9BQ65 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
USB1Q9BQ65 LRRC37A16P-202ENST00000586022 3725 ntBASIC6.01□□□□□ -1.45
USB1Q9BQ65 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC6.01□□□□□ -1.45
USB1Q9BQ65 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC6.01□□□□□ -1.45
USB1Q9BQ65 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
USB1Q9BQ65 AC010894.1-201ENST00000313760 361 ntBASIC6.01□□□□□ -1.45
USB1Q9BQ65 Y_RNA.143-201ENST00000363520 106 ntBASIC6.01□□□□□ -1.45
USB1Q9BQ65 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
USB1Q9BQ65 RNU6-1027P-201ENST00000383998 107 ntBASIC6.01□□□□□ -1.45
USB1Q9BQ65 MIR199B-201ENST00000384849 110 ntBASIC6.01□□□□□ -1.45
USB1Q9BQ65 Y_RNA.581-201ENST00000391017 97 ntBASIC6.01□□□□□ -1.45
USB1Q9BQ65 RNA5SP474-201ENST00000391234 90 ntBASIC6.01□□□□□ -1.45
USB1Q9BQ65 AL023284.3-201ENST00000407767 334 ntBASIC6.01□□□□□ -1.45
USB1Q9BQ65 RNU2-20P-201ENST00000410425 191 ntBASIC6.01□□□□□ -1.45
USB1Q9BQ65 RNA5SP494-201ENST00000410653 129 ntBASIC6.01□□□□□ -1.45
USB1Q9BQ65 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC6.01□□□□□ -1.45
USB1Q9BQ65 RPL18AP14-201ENST00000417685 526 ntBASIC6.01□□□□□ -1.45
USB1Q9BQ65 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC6.01□□□□□ -1.45
USB1Q9BQ65 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC6.01□□□□□ -1.45
USB1Q9BQ65 VTI1BP4-201ENST00000427516 527 ntBASIC6.01□□□□□ -1.45
USB1Q9BQ65 AC092573.2-201ENST00000434546 243 ntBASIC6.01□□□□□ -1.45
USB1Q9BQ65 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC6.01□□□□□ -1.45
USB1Q9BQ65 AL390119.1-201ENST00000440329 312 ntBASIC6.01□□□□□ -1.45
USB1Q9BQ65 AC064862.5-201ENST00000440618 334 ntBASIC6.01□□□□□ -1.45
USB1Q9BQ65 PPIAP32-201ENST00000449940 472 ntBASIC6.01□□□□□ -1.45
USB1Q9BQ65 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC6.01□□□□□ -1.45
USB1Q9BQ65 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC6.01□□□□□ -1.45
USB1Q9BQ65 HMGB1P25-201ENST00000468402 607 ntBASIC6.01□□□□□ -1.45
USB1Q9BQ65 RN7SL216P-201ENST00000471607 298 ntBASIC6.01□□□□□ -1.45
USB1Q9BQ65 RN7SL655P-201ENST00000486087 298 ntBASIC6.01□□□□□ -1.45
USB1Q9BQ65 AC009120.1-201ENST00000493458 473 ntBASIC6.01□□□□□ -1.45
USB1Q9BQ65 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.01□□□□□ -1.45
USB1Q9BQ65 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC6.01□□□□□ -1.45
USB1Q9BQ65 SNORA70.11-201ENST00000515987 138 ntBASIC6.01□□□□□ -1.45
USB1Q9BQ65 SNORA70.13-201ENST00000516116 138 ntBASIC6.01□□□□□ -1.45
USB1Q9BQ65 IGKV2D-36-201ENST00000518643 226 ntBASIC6.01□□□□□ -1.45
USB1Q9BQ65 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
USB1Q9BQ65 FKBP1BP1-201ENST00000553366 325 ntBASIC6.01□□□□□ -1.45
USB1Q9BQ65 AC127381.1-201ENST00000555979 939 ntBASIC6.01□□□□□ -1.45
USB1Q9BQ65 AC020914.7-201ENST00000594477 545 ntBASIC6.01□□□□□ -1.45
USB1Q9BQ65 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC6.01□□□□□ -1.45
USB1Q9BQ65 AL355812.1-201ENST00000603215 216 ntBASIC6.01□□□□□ -1.45
USB1Q9BQ65 AC012175.1-201ENST00000603755 531 ntBASIC6.01□□□□□ -1.45
USB1Q9BQ65 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC6.01□□□□□ -1.45
USB1Q9BQ65 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC6.01□□□□□ -1.45
USB1Q9BQ65 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.01□□□□□ -1.45
USB1Q9BQ65 ZNF285B-201ENST00000561698 1767 ntBASIC6.01□□□□□ -1.45
USB1Q9BQ65 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
USB1Q9BQ65 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6□□□□□ -1.45
USB1Q9BQ65 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC6□□□□□ -1.45
USB1Q9BQ65 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6□□□□□ -1.45
USB1Q9BQ65 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC6□□□□□ -1.45
USB1Q9BQ65 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
USB1Q9BQ65 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC6□□□□□ -1.45
USB1Q9BQ65 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6□□□□□ -1.45
USB1Q9BQ65 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC6□□□□□ -1.45
USB1Q9BQ65 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC6□□□□□ -1.45
USB1Q9BQ65 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
USB1Q9BQ65 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
USB1Q9BQ65 PPIAP24-201ENST00000328558 471 ntBASIC6□□□□□ -1.45
USB1Q9BQ65 Y_RNA.76-201ENST00000362931 109 ntBASIC6□□□□□ -1.45
USB1Q9BQ65 Y_RNA.324-201ENST00000365165 102 ntBASIC6□□□□□ -1.45
USB1Q9BQ65 ARSFP1-201ENST00000398758 477 ntBASIC6□□□□□ -1.45
USB1Q9BQ65 CYCSP33-201ENST00000414485 327 ntBASIC6□□□□□ -1.45
USB1Q9BQ65 AC130360.1-201ENST00000425489 1117 ntBASIC6□□□□□ -1.45
USB1Q9BQ65 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC6□□□□□ -1.45
USB1Q9BQ65 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC6□□□□□ -1.45
USB1Q9BQ65 EEF1B2P3-201ENST00000447718 678 ntBASIC6□□□□□ -1.45
USB1Q9BQ65 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC6□□□□□ -1.45
USB1Q9BQ65 ISCUP1-201ENST00000454451 448 ntBASIC6□□□□□ -1.45
USB1Q9BQ65 RNU6-1037P-201ENST00000459571 107 ntBASIC6□□□□□ -1.45
USB1Q9BQ65 RPS10P20-201ENST00000494130 463 ntBASIC6□□□□□ -1.45
USB1Q9BQ65 SEPT14P8-201ENST00000508026 178 ntBASIC6□□□□□ -1.45
USB1Q9BQ65 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC6□□□□□ -1.45
USB1Q9BQ65 RNU7-200P-201ENST00000516105 62 ntBASIC6□□□□□ -1.45
USB1Q9BQ65 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC6□□□□□ -1.45
USB1Q9BQ65 SNRPGP16-201ENST00000533275 226 ntBASIC6□□□□□ -1.45
USB1Q9BQ65 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC6□□□□□ -1.45
USB1Q9BQ65 ASB8-207ENST00000536953 923 ntTSL 2 BASIC6□□□□□ -1.45
USB1Q9BQ65 AL442163.3-201ENST00000554110 156 ntBASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms