Protein–RNA interactions for Protein: Q96KN3

PKNOX2, Homeobox protein PKNOX2, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2Q96KN3 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
PKNOX2Q96KN3 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PKNOX2Q96KN3 AL356095.1-201ENST00000417217 199 ntBASIC3.62□□□□□ -1.83
PKNOX2Q96KN3 AC099677.1-201ENST00000420575 175 ntBASIC3.62□□□□□ -1.83
PKNOX2Q96KN3 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
PKNOX2Q96KN3 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
PKNOX2Q96KN3 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.62□□□□□ -1.83
PKNOX2Q96KN3 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
PKNOX2Q96KN3 AL645638.1-201ENST00000440519 361 ntBASIC3.62□□□□□ -1.83
PKNOX2Q96KN3 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.62□□□□□ -1.83
PKNOX2Q96KN3 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
PKNOX2Q96KN3 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC3.62□□□□□ -1.83
PKNOX2Q96KN3 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC3.62□□□□□ -1.83
PKNOX2Q96KN3 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC3.62□□□□□ -1.83
PKNOX2Q96KN3 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.62□□□□□ -1.83
PKNOX2Q96KN3 AC092470.1-201ENST00000546187 132 ntBASIC3.62□□□□□ -1.83
PKNOX2Q96KN3 AL442163.2-201ENST00000553912 710 ntBASIC3.62□□□□□ -1.83
PKNOX2Q96KN3 AC005242.1-201ENST00000585658 438 ntBASIC3.62□□□□□ -1.83
PKNOX2Q96KN3 AC008745.1-201ENST00000604064 271 ntBASIC3.62□□□□□ -1.83
PKNOX2Q96KN3 KATNBL1P1-201ENST00000605192 748 ntBASIC3.62□□□□□ -1.83
PKNOX2Q96KN3 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.62□□□□□ -1.83
PKNOX2Q96KN3 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.62□□□□□ -1.83
PKNOX2Q96KN3 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC3.62□□□□□ -1.83
PKNOX2Q96KN3 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PKNOX2Q96KN3 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.62□□□□□ -1.83
PKNOX2Q96KN3 AC009501.3-201ENST00000605001 1352 ntBASIC3.62□□□□□ -1.83
PKNOX2Q96KN3 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PKNOX2Q96KN3 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.61□□□□□ -1.83
PKNOX2Q96KN3 SNORA25.6-201ENST00000364121 118 ntBASIC3.61□□□□□ -1.83
PKNOX2Q96KN3 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PKNOX2Q96KN3 AC245054.2-201ENST00000415639 319 ntBASIC3.61□□□□□ -1.83
PKNOX2Q96KN3 COX6CP17-201ENST00000421389 185 ntBASIC3.61□□□□□ -1.83
PKNOX2Q96KN3 MTND4LP14-201ENST00000429447 288 ntBASIC3.61□□□□□ -1.83
PKNOX2Q96KN3 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC3.61□□□□□ -1.83
PKNOX2Q96KN3 AC073143.1-201ENST00000436316 395 ntBASIC3.61□□□□□ -1.83
PKNOX2Q96KN3 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PKNOX2Q96KN3 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC3.61□□□□□ -1.83
PKNOX2Q96KN3 NAMPTP2-201ENST00000505629 1115 ntBASIC3.61□□□□□ -1.83
PKNOX2Q96KN3 MLLT10P2-201ENST00000506434 249 ntBASIC3.61□□□□□ -1.83
PKNOX2Q96KN3 SCARNA20.6-201ENST00000517251 106 ntBASIC3.61□□□□□ -1.83
PKNOX2Q96KN3 MRPL49P2-201ENST00000521066 465 ntBASIC3.61□□□□□ -1.83
PKNOX2Q96KN3 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.61□□□□□ -1.83
PKNOX2Q96KN3 ELOCP31-201ENST00000540463 467 ntBASIC3.61□□□□□ -1.83
PKNOX2Q96KN3 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.61□□□□□ -1.83
PKNOX2Q96KN3 AC023575.1-201ENST00000580510 358 ntBASIC3.61□□□□□ -1.83
PKNOX2Q96KN3 AC007448.1-201ENST00000582714 234 ntBASIC3.61□□□□□ -1.83
PKNOX2Q96KN3 MIR4443-201ENST00000585052 53 ntBASIC3.61□□□□□ -1.83
PKNOX2Q96KN3 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.61□□□□□ -1.83
PKNOX2Q96KN3 AC079089.3-201ENST00000603094 673 ntBASIC3.61□□□□□ -1.83
PKNOX2Q96KN3 AC079880.2-201ENST00000603790 1213 ntBASIC3.61□□□□□ -1.83
PKNOX2Q96KN3 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.61□□□□□ -1.83
PKNOX2Q96KN3 AL162233.1-201ENST00000620014 944 ntBASIC3.61□□□□□ -1.83
PKNOX2Q96KN3 AC090506.2-201ENST00000624521 419 ntBASIC3.61□□□□□ -1.83
PKNOX2Q96KN3 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC3.61□□□□□ -1.83
PKNOX2Q96KN3 AL512283.1-201ENST00000606756 1384 ntBASIC3.61□□□□□ -1.83
PKNOX2Q96KN3 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PKNOX2Q96KN3 RNU6-339P-201ENST00000384310 107 ntBASIC3.6□□□□□ -1.83
PKNOX2Q96KN3 RPS4XP7-201ENST00000406274 780 ntBASIC3.6□□□□□ -1.83
PKNOX2Q96KN3 RN7SKP111-201ENST00000410349 271 ntBASIC3.6□□□□□ -1.83
PKNOX2Q96KN3 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.6□□□□□ -1.83
PKNOX2Q96KN3 RPS3AP9-201ENST00000417027 792 ntBASIC3.6□□□□□ -1.83
PKNOX2Q96KN3 ZNF965P-201ENST00000432501 817 ntBASIC3.6□□□□□ -1.83
PKNOX2Q96KN3 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.6□□□□□ -1.83
PKNOX2Q96KN3 AC008264.1-201ENST00000447612 367 ntBASIC3.6□□□□□ -1.83
PKNOX2Q96KN3 Z99127.3-201ENST00000448158 395 ntBASIC3.6□□□□□ -1.83
PKNOX2Q96KN3 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.6□□□□□ -1.83
PKNOX2Q96KN3 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.6□□□□□ -1.83
PKNOX2Q96KN3 UBDP1-202ENST00000457888 382 ntBASIC3.6□□□□□ -1.83
PKNOX2Q96KN3 AC025768.1-201ENST00000510057 267 ntBASIC3.6□□□□□ -1.83
PKNOX2Q96KN3 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.6□□□□□ -1.83
PKNOX2Q96KN3 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PKNOX2Q96KN3 OR5BM1P-201ENST00000512021 366 ntBASIC3.6□□□□□ -1.83
PKNOX2Q96KN3 SNORA31.9-201ENST00000516429 84 ntBASIC3.6□□□□□ -1.83
PKNOX2Q96KN3 RANP9-201ENST00000519957 271 ntBASIC3.6□□□□□ -1.83
PKNOX2Q96KN3 AC087272.1-201ENST00000523624 533 ntBASIC3.6□□□□□ -1.83
PKNOX2Q96KN3 OR4R1P-201ENST00000529879 463 ntBASIC3.6□□□□□ -1.83
PKNOX2Q96KN3 ACTR3BP3-201ENST00000565577 979 ntBASIC3.6□□□□□ -1.83
PKNOX2Q96KN3 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.6□□□□□ -1.83
PKNOX2Q96KN3 DUXAP3-201ENST00000603616 594 ntBASIC3.6□□□□□ -1.83
PKNOX2Q96KN3 AP001330.4-201ENST00000604350 154 ntBASIC3.6□□□□□ -1.83
PKNOX2Q96KN3 AL035413.2-201ENST00000604801 525 ntBASIC3.6□□□□□ -1.83
PKNOX2Q96KN3 AL355802.4-201ENST00000607635 548 ntBASIC3.6□□□□□ -1.83
PKNOX2Q96KN3 AC106028.5-201ENST00000610332 395 ntBASIC3.6□□□□□ -1.83
PKNOX2Q96KN3 AC025016.1-201ENST00000616746 682 ntBASIC3.6□□□□□ -1.83
PKNOX2Q96KN3 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.6□□□□□ -1.83
PKNOX2Q96KN3 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.6□□□□□ -1.83
PKNOX2Q96KN3 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
PKNOX2Q96KN3 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PKNOX2Q96KN3 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
PKNOX2Q96KN3 SNORD115-48-201ENST00000364764 76 ntBASIC3.59□□□□□ -1.83
PKNOX2Q96KN3 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
PKNOX2Q96KN3 PPIAP31-201ENST00000405422 495 ntBASIC3.59□□□□□ -1.83
PKNOX2Q96KN3 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.59□□□□□ -1.83
PKNOX2Q96KN3 RNU6-193P-201ENST00000410977 107 ntBASIC3.59□□□□□ -1.83
PKNOX2Q96KN3 TATDN1P1-201ENST00000414123 891 ntBASIC3.59□□□□□ -1.83
PKNOX2Q96KN3 RPL32P35-201ENST00000415214 394 ntBASIC3.59□□□□□ -1.83
PKNOX2Q96KN3 AC012065.2-201ENST00000421295 375 ntBASIC3.59□□□□□ -1.83
PKNOX2Q96KN3 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.59□□□□□ -1.83
PKNOX2Q96KN3 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PKNOX2Q96KN3 CCNB1IP1P2-201ENST00000432876 818 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 130.9 ms