Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 AC116347.2-201ENST00000514912 523 ntBASIC4.83□□□□□ -1.64
CDK5RAP3Q96JB5 IGLV3-26-201ENST00000520756 302 ntBASIC4.83□□□□□ -1.64
CDK5RAP3Q96JB5 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.83□□□□□ -1.64
CDK5RAP3Q96JB5 AP004247.1-201ENST00000531556 1289 ntBASIC4.83□□□□□ -1.64
CDK5RAP3Q96JB5 AL121834.1-201ENST00000572284 509 ntBASIC4.83□□□□□ -1.64
CDK5RAP3Q96JB5 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC4.83□□□□□ -1.64
CDK5RAP3Q96JB5 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC4.83□□□□□ -1.64
CDK5RAP3Q96JB5 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.83□□□□□ -1.64
CDK5RAP3Q96JB5 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.83□□□□□ -1.64
CDK5RAP3Q96JB5 AC005255.1-201ENST00000593748 216 ntBASIC4.83□□□□□ -1.64
CDK5RAP3Q96JB5 AL009028.1-201ENST00000604895 802 ntBASIC4.83□□□□□ -1.64
CDK5RAP3Q96JB5 AC080013.4-201ENST00000607624 649 ntBASIC4.83□□□□□ -1.64
CDK5RAP3Q96JB5 AC013562.2-201ENST00000611632 603 ntBASIC4.83□□□□□ -1.64
CDK5RAP3Q96JB5 AC008121.2-201ENST00000614647 523 ntBASIC4.83□□□□□ -1.64
CDK5RAP3Q96JB5 AC007546.1-201ENST00000619452 559 ntBASIC4.83□□□□□ -1.64
CDK5RAP3Q96JB5 AC009318.4-201ENST00000620496 486 ntBASIC4.83□□□□□ -1.64
CDK5RAP3Q96JB5 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CDK5RAP3Q96JB5 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CDK5RAP3Q96JB5 SAGE4P-201ENST00000442271 3381 ntBASIC4.83□□□□□ -1.64
CDK5RAP3Q96JB5 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.83□□□□□ -1.64
CDK5RAP3Q96JB5 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
CDK5RAP3Q96JB5 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.83□□□□□ -1.64
CDK5RAP3Q96JB5 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CDK5RAP3Q96JB5 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CDK5RAP3Q96JB5 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.83□□□□□ -1.64
CDK5RAP3Q96JB5 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CDK5RAP3Q96JB5 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.82□□□□□ -1.64
CDK5RAP3Q96JB5 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.82□□□□□ -1.64
CDK5RAP3Q96JB5 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CDK5RAP3Q96JB5 Y_RNA.359-201ENST00000365498 102 ntBASIC4.82□□□□□ -1.64
CDK5RAP3Q96JB5 AL031679.1-201ENST00000400616 525 ntBASIC4.82□□□□□ -1.64
CDK5RAP3Q96JB5 RPL17P12-201ENST00000413391 526 ntBASIC4.82□□□□□ -1.64
CDK5RAP3Q96JB5 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.82□□□□□ -1.64
CDK5RAP3Q96JB5 RPS3AP54-201ENST00000435535 734 ntBASIC4.82□□□□□ -1.64
CDK5RAP3Q96JB5 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.82□□□□□ -1.64
CDK5RAP3Q96JB5 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.82□□□□□ -1.64
CDK5RAP3Q96JB5 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.82□□□□□ -1.64
CDK5RAP3Q96JB5 USP9YP34-201ENST00000453983 808 ntBASIC4.82□□□□□ -1.64
CDK5RAP3Q96JB5 DNAJC19P1-201ENST00000455312 319 ntBASIC4.82□□□□□ -1.64
CDK5RAP3Q96JB5 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.82□□□□□ -1.64
CDK5RAP3Q96JB5 AP000797.1-201ENST00000478870 387 ntBASIC4.82□□□□□ -1.64
CDK5RAP3Q96JB5 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CDK5RAP3Q96JB5 AC079140.3-201ENST00000511111 550 ntBASIC4.82□□□□□ -1.64
CDK5RAP3Q96JB5 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC4.82□□□□□ -1.64
CDK5RAP3Q96JB5 AC022861.1-201ENST00000522981 663 ntBASIC4.82□□□□□ -1.64
CDK5RAP3Q96JB5 AP003033.1-201ENST00000527244 415 ntBASIC4.82□□□□□ -1.64
CDK5RAP3Q96JB5 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.82□□□□□ -1.64
CDK5RAP3Q96JB5 AC068587.4-201ENST00000533893 186 ntBASIC4.82□□□□□ -1.64
CDK5RAP3Q96JB5 AC006064.5-201ENST00000541782 248 ntBASIC4.82□□□□□ -1.64
CDK5RAP3Q96JB5 AL109766.1-201ENST00000555080 552 ntBASIC4.82□□□□□ -1.64
CDK5RAP3Q96JB5 AC091489.2-201ENST00000566263 604 ntBASIC4.82□□□□□ -1.64
CDK5RAP3Q96JB5 MIR5096-201ENST00000583713 70 ntBASIC4.82□□□□□ -1.64
CDK5RAP3Q96JB5 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.82□□□□□ -1.64
CDK5RAP3Q96JB5 AC083760.1-201ENST00000589621 670 ntBASIC4.82□□□□□ -1.64
CDK5RAP3Q96JB5 AC068790.4-201ENST00000602474 263 ntBASIC4.82□□□□□ -1.64
CDK5RAP3Q96JB5 AC025165.5-201ENST00000602802 578 ntBASIC4.82□□□□□ -1.64
CDK5RAP3Q96JB5 PRELID3BP8-201ENST00000604148 295 ntBASIC4.82□□□□□ -1.64
CDK5RAP3Q96JB5 AC025588.3-201ENST00000604182 274 ntBASIC4.82□□□□□ -1.64
CDK5RAP3Q96JB5 AL356218.2-201ENST00000605264 187 ntBASIC4.82□□□□□ -1.64
CDK5RAP3Q96JB5 AC026368.1-201ENST00000614934 690 ntBASIC4.82□□□□□ -1.64
CDK5RAP3Q96JB5 AL121873.1-201ENST00000616013 524 ntBASIC4.82□□□□□ -1.64
CDK5RAP3Q96JB5 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.82□□□□□ -1.64
CDK5RAP3Q96JB5 AC084035.1-201ENST00000634543 607 ntBASIC4.82□□□□□ -1.64
CDK5RAP3Q96JB5 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CDK5RAP3Q96JB5 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
CDK5RAP3Q96JB5 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
CDK5RAP3Q96JB5 AC017104.4-201ENST00000636283 1592 ntBASIC4.82□□□□□ -1.64
CDK5RAP3Q96JB5 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CDK5RAP3Q96JB5 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CDK5RAP3Q96JB5 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.81□□□□□ -1.64
CDK5RAP3Q96JB5 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.81□□□□□ -1.64
CDK5RAP3Q96JB5 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.81□□□□□ -1.64
CDK5RAP3Q96JB5 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.81□□□□□ -1.64
CDK5RAP3Q96JB5 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CDK5RAP3Q96JB5 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CDK5RAP3Q96JB5 FGF7P2-201ENST00000332473 296 ntBASIC4.81□□□□□ -1.64
CDK5RAP3Q96JB5 RNU4-91P-201ENST00000364778 135 ntBASIC4.81□□□□□ -1.64
CDK5RAP3Q96JB5 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CDK5RAP3Q96JB5 AL583835.1-201ENST00000399570 407 ntBASIC4.81□□□□□ -1.64
CDK5RAP3Q96JB5 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CDK5RAP3Q96JB5 AC011933.1-201ENST00000413334 321 ntBASIC4.81□□□□□ -1.64
CDK5RAP3Q96JB5 SLC44A3-AS1-205ENST00000424505 612 ntBASIC4.81□□□□□ -1.64
CDK5RAP3Q96JB5 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.81□□□□□ -1.64
CDK5RAP3Q96JB5 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.81□□□□□ -1.64
CDK5RAP3Q96JB5 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.81□□□□□ -1.64
CDK5RAP3Q96JB5 AC005297.2-201ENST00000450430 606 ntBASIC4.81□□□□□ -1.64
CDK5RAP3Q96JB5 BX322784.1-201ENST00000455793 1077 ntBASIC4.81□□□□□ -1.64
CDK5RAP3Q96JB5 CFTRP1-201ENST00000456646 183 ntBASIC4.81□□□□□ -1.64
CDK5RAP3Q96JB5 AC116533.1-201ENST00000459748 321 ntBASIC4.81□□□□□ -1.64
CDK5RAP3Q96JB5 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.81□□□□□ -1.64
CDK5RAP3Q96JB5 PABPC1P3-201ENST00000469174 459 ntBASIC4.81□□□□□ -1.64
CDK5RAP3Q96JB5 RPL31P50-201ENST00000471002 296 ntBASIC4.81□□□□□ -1.64
CDK5RAP3Q96JB5 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.81□□□□□ -1.64
CDK5RAP3Q96JB5 AC106872.3-201ENST00000495104 446 ntBASIC4.81□□□□□ -1.64
CDK5RAP3Q96JB5 AC108145.1-201ENST00000503770 153 ntBASIC4.81□□□□□ -1.64
CDK5RAP3Q96JB5 AC021678.1-201ENST00000505195 936 ntBASIC4.81□□□□□ -1.64
CDK5RAP3Q96JB5 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC4.81□□□□□ -1.64
CDK5RAP3Q96JB5 PPBPP1-201ENST00000510807 373 ntBASIC4.81□□□□□ -1.64
CDK5RAP3Q96JB5 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CDK5RAP3Q96JB5 MTND4LP31-201ENST00000514859 294 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms