Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.89□□□□□ -1.47
IFT43Q96FT9 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC5.89□□□□□ -1.47
IFT43Q96FT9 MIR4260-201ENST00000583107 67 ntBASIC5.89□□□□□ -1.47
IFT43Q96FT9 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
IFT43Q96FT9 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
IFT43Q96FT9 RPL12P48-201ENST00000605620 304 ntBASIC5.89□□□□□ -1.47
IFT43Q96FT9 AL157817.1-201ENST00000614264 790 ntBASIC5.89□□□□□ -1.47
IFT43Q96FT9 Z69720.2-201ENST00000624755 279 ntBASIC5.89□□□□□ -1.47
IFT43Q96FT9 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.89□□□□□ -1.47
IFT43Q96FT9 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.89□□□□□ -1.47
IFT43Q96FT9 USP44-208ENST00000552440 1818 ntTSL 5 BASIC5.89□□□□□ -1.47
IFT43Q96FT9 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
IFT43Q96FT9 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
IFT43Q96FT9 AC092376.2-201ENST00000622621 4116 ntBASIC5.89□□□□□ -1.47
IFT43Q96FT9 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
IFT43Q96FT9 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
IFT43Q96FT9 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
IFT43Q96FT9 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
IFT43Q96FT9 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
IFT43Q96FT9 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
IFT43Q96FT9 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.88□□□□□ -1.47
IFT43Q96FT9 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.88□□□□□ -1.47
IFT43Q96FT9 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
IFT43Q96FT9 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.88□□□□□ -1.47
IFT43Q96FT9 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.88□□□□□ -1.47
IFT43Q96FT9 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC5.88□□□□□ -1.47
IFT43Q96FT9 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.88□□□□□ -1.47
IFT43Q96FT9 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.88□□□□□ -1.47
IFT43Q96FT9 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
IFT43Q96FT9 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
IFT43Q96FT9 Y_RNA.212-201ENST00000364177 102 ntBASIC5.88□□□□□ -1.47
IFT43Q96FT9 RNU6-784P-201ENST00000384330 106 ntBASIC5.88□□□□□ -1.47
IFT43Q96FT9 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
IFT43Q96FT9 AL136372.1-201ENST00000403060 228 ntBASIC5.88□□□□□ -1.47
IFT43Q96FT9 AL049697.2-201ENST00000403708 294 ntBASIC5.88□□□□□ -1.47
IFT43Q96FT9 AL591848.1-201ENST00000413092 322 ntBASIC5.88□□□□□ -1.47
IFT43Q96FT9 AC079809.1-201ENST00000415468 276 ntBASIC5.88□□□□□ -1.47
IFT43Q96FT9 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC5.88□□□□□ -1.47
IFT43Q96FT9 AL590609.2-201ENST00000421430 368 ntBASIC5.88□□□□□ -1.47
IFT43Q96FT9 AC005019.1-201ENST00000436455 431 ntBASIC5.88□□□□□ -1.47
IFT43Q96FT9 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.88□□□□□ -1.47
IFT43Q96FT9 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC5.88□□□□□ -1.47
IFT43Q96FT9 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC5.88□□□□□ -1.47
IFT43Q96FT9 AC016696.1-201ENST00000446949 318 ntBASIC5.88□□□□□ -1.47
IFT43Q96FT9 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.88□□□□□ -1.47
IFT43Q96FT9 AC011225.1-201ENST00000457751 369 ntBASIC5.88□□□□□ -1.47
IFT43Q96FT9 AC004801.2-202ENST00000463559 283 ntBASIC5.88□□□□□ -1.47
IFT43Q96FT9 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
IFT43Q96FT9 TRBVA-201ENST00000498804 316 ntBASIC5.88□□□□□ -1.47
IFT43Q96FT9 RNU6-256P-201ENST00000516747 97 ntBASIC5.88□□□□□ -1.47
IFT43Q96FT9 RNU6-798P-201ENST00000516912 103 ntBASIC5.88□□□□□ -1.47
IFT43Q96FT9 RNA5SP230-201ENST00000517039 122 ntBASIC5.88□□□□□ -1.47
IFT43Q96FT9 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC5.88□□□□□ -1.47
IFT43Q96FT9 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC5.88□□□□□ -1.47
IFT43Q96FT9 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC5.88□□□□□ -1.47
IFT43Q96FT9 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC5.88□□□□□ -1.47
IFT43Q96FT9 AL161670.1-201ENST00000554348 137 ntBASIC5.88□□□□□ -1.47
IFT43Q96FT9 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC5.88□□□□□ -1.47
IFT43Q96FT9 AC018552.1-201ENST00000562099 811 ntBASIC5.88□□□□□ -1.47
IFT43Q96FT9 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.88□□□□□ -1.47
IFT43Q96FT9 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC5.88□□□□□ -1.47
IFT43Q96FT9 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC5.88□□□□□ -1.47
IFT43Q96FT9 AL670379.11-201ENST00000604059 253 ntBASIC5.88□□□□□ -1.47
IFT43Q96FT9 AL670379.10-201ENST00000604330 253 ntBASIC5.88□□□□□ -1.47
IFT43Q96FT9 AL670379.12-201ENST00000605291 253 ntBASIC5.88□□□□□ -1.47
IFT43Q96FT9 AL670379.9-201ENST00000605428 253 ntBASIC5.88□□□□□ -1.47
IFT43Q96FT9 AL022394.1-201ENST00000606979 292 ntBASIC5.88□□□□□ -1.47
IFT43Q96FT9 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC5.88□□□□□ -1.47
IFT43Q96FT9 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.88□□□□□ -1.47
IFT43Q96FT9 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC5.88□□□□□ -1.47
IFT43Q96FT9 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.88□□□□□ -1.47
IFT43Q96FT9 AP001029.2-203ENST00000589795 4910 ntBASIC5.88□□□□□ -1.47
IFT43Q96FT9 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.88□□□□□ -1.47
IFT43Q96FT9 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
IFT43Q96FT9 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
IFT43Q96FT9 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
IFT43Q96FT9 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
IFT43Q96FT9 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.88□□□□□ -1.47
IFT43Q96FT9 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
IFT43Q96FT9 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
IFT43Q96FT9 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
IFT43Q96FT9 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
IFT43Q96FT9 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
IFT43Q96FT9 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
IFT43Q96FT9 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
IFT43Q96FT9 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
IFT43Q96FT9 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
IFT43Q96FT9 Y_RNA.47-201ENST00000362697 108 ntBASIC5.87□□□□□ -1.47
IFT43Q96FT9 RNA5SP242-201ENST00000364171 118 ntBASIC5.87□□□□□ -1.47
IFT43Q96FT9 SNORD115-7-201ENST00000365306 82 ntBASIC5.87□□□□□ -1.47
IFT43Q96FT9 Y_RNA.476-201ENST00000384347 108 ntBASIC5.87□□□□□ -1.47
IFT43Q96FT9 Y_RNA.482-201ENST00000384377 111 ntBASIC5.87□□□□□ -1.47
IFT43Q96FT9 TANK-203ENST00000402568 878 ntTSL 5 BASIC5.87□□□□□ -1.47
IFT43Q96FT9 RPL6P29-201ENST00000414863 865 ntBASIC5.87□□□□□ -1.47
IFT43Q96FT9 RPL31P12-201ENST00000422587 358 ntBASIC5.87□□□□□ -1.47
IFT43Q96FT9 BX323845.3-201ENST00000428215 527 ntBASIC5.87□□□□□ -1.47
IFT43Q96FT9 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.87□□□□□ -1.47
IFT43Q96FT9 EEF1A1P1-201ENST00000447052 739 ntBASIC5.87□□□□□ -1.47
IFT43Q96FT9 AL596266.1-201ENST00000448132 400 ntBASIC5.87□□□□□ -1.47
IFT43Q96FT9 FRG2FP-204ENST00000453982 852 ntBASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms