Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.81□□□□□ -1.64
HPS3Q969F9 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC4.81□□□□□ -1.64
HPS3Q969F9 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.81□□□□□ -1.64
HPS3Q969F9 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC4.81□□□□□ -1.64
HPS3Q969F9 AL356387.2-201ENST00000422272 243 ntBASIC4.81□□□□□ -1.64
HPS3Q969F9 OFD1P13Y-201ENST00000431179 1232 ntBASIC4.81□□□□□ -1.64
HPS3Q969F9 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.81□□□□□ -1.64
HPS3Q969F9 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC4.81□□□□□ -1.64
HPS3Q969F9 USP9YP29-201ENST00000445112 563 ntBASIC4.81□□□□□ -1.64
HPS3Q969F9 AL592447.1-201ENST00000447592 540 ntBASIC4.81□□□□□ -1.64
HPS3Q969F9 RPL5P32-201ENST00000454085 879 ntBASIC4.81□□□□□ -1.64
HPS3Q969F9 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC4.81□□□□□ -1.64
HPS3Q969F9 RPS23P7-201ENST00000466210 444 ntBASIC4.81□□□□□ -1.64
HPS3Q969F9 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HPS3Q969F9 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.81□□□□□ -1.64
HPS3Q969F9 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC4.81□□□□□ -1.64
HPS3Q969F9 TXNP6-201ENST00000510190 310 ntBASIC4.81□□□□□ -1.64
HPS3Q969F9 AF131216.2-201ENST00000512316 564 ntBASIC4.81□□□□□ -1.64
HPS3Q969F9 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HPS3Q969F9 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.81□□□□□ -1.64
HPS3Q969F9 AC022447.1-201ENST00000515358 464 ntBASIC4.81□□□□□ -1.64
HPS3Q969F9 AC008694.2-201ENST00000517591 306 ntBASIC4.81□□□□□ -1.64
HPS3Q969F9 AC134698.5-201ENST00000519444 336 ntBASIC4.81□□□□□ -1.64
HPS3Q969F9 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HPS3Q969F9 MTND4LP18-201ENST00000526864 291 ntBASIC4.81□□□□□ -1.64
HPS3Q969F9 AP002963.1-201ENST00000530590 184 ntBASIC4.81□□□□□ -1.64
HPS3Q969F9 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.81□□□□□ -1.64
HPS3Q969F9 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.81□□□□□ -1.64
HPS3Q969F9 TRAV8-5-201ENST00000537369 341 ntBASIC4.81□□□□□ -1.64
HPS3Q969F9 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC4.81□□□□□ -1.64
HPS3Q969F9 AL352979.3-201ENST00000553515 247 ntBASIC4.81□□□□□ -1.64
HPS3Q969F9 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC4.81□□□□□ -1.64
HPS3Q969F9 AC090615.1-201ENST00000577519 154 ntBASIC4.81□□□□□ -1.64
HPS3Q969F9 MIR4307-201ENST00000582802 84 ntBASIC4.81□□□□□ -1.64
HPS3Q969F9 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.81□□□□□ -1.64
HPS3Q969F9 AL353997.4-201ENST00000586196 166 ntBASIC4.81□□□□□ -1.64
HPS3Q969F9 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC4.81□□□□□ -1.64
HPS3Q969F9 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.81□□□□□ -1.64
HPS3Q969F9 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.81□□□□□ -1.64
HPS3Q969F9 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HPS3Q969F9 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.81□□□□□ -1.64
HPS3Q969F9 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
HPS3Q969F9 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HPS3Q969F9 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HPS3Q969F9 AL359893.1-201ENST00000447628 1580 ntBASIC4.81□□□□□ -1.64
HPS3Q969F9 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.81□□□□□ -1.64
HPS3Q969F9 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.81□□□□□ -1.64
HPS3Q969F9 ZNF33BP1-201ENST00000452497 1834 ntBASIC4.81□□□□□ -1.64
HPS3Q969F9 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HPS3Q969F9 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HPS3Q969F9 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HPS3Q969F9 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HPS3Q969F9 MTND4P26-201ENST00000415971 1359 ntBASIC4.8□□□□□ -1.64
HPS3Q969F9 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
HPS3Q969F9 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
HPS3Q969F9 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.8□□□□□ -1.64
HPS3Q969F9 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HPS3Q969F9 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.8□□□□□ -1.64
HPS3Q969F9 OR5P1P-201ENST00000299512 925 ntBASIC4.8□□□□□ -1.64
HPS3Q969F9 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC4.8□□□□□ -1.64
HPS3Q969F9 RNA5SP502-201ENST00000362694 119 ntBASIC4.8□□□□□ -1.64
HPS3Q969F9 RNY4P24-201ENST00000362735 96 ntBASIC4.8□□□□□ -1.64
HPS3Q969F9 SNORA70.2-201ENST00000364506 135 ntBASIC4.8□□□□□ -1.64
HPS3Q969F9 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
HPS3Q969F9 RN7SKP56-201ENST00000410513 331 ntBASIC4.8□□□□□ -1.64
HPS3Q969F9 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.8□□□□□ -1.64
HPS3Q969F9 AC007899.1-201ENST00000412776 775 ntBASIC4.8□□□□□ -1.64
HPS3Q969F9 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC4.8□□□□□ -1.64
HPS3Q969F9 Z97055.1-201ENST00000419730 712 ntBASIC4.8□□□□□ -1.64
HPS3Q969F9 RPL21P32-201ENST00000419877 477 ntBASIC4.8□□□□□ -1.64
HPS3Q969F9 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.8□□□□□ -1.64
HPS3Q969F9 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC4.8□□□□□ -1.64
HPS3Q969F9 RPS27AP12-201ENST00000429552 465 ntBASIC4.8□□□□□ -1.64
HPS3Q969F9 AC109583.1-201ENST00000432156 268 ntBASIC4.8□□□□□ -1.64
HPS3Q969F9 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC4.8□□□□□ -1.64
HPS3Q969F9 RPL29P29-201ENST00000448725 423 ntBASIC4.8□□□□□ -1.64
HPS3Q969F9 snoU13.1-201ENST00000459157 104 ntBASIC4.8□□□□□ -1.64
HPS3Q969F9 AP001992.1-205ENST00000462248 379 ntBASIC4.8□□□□□ -1.64
HPS3Q969F9 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.8□□□□□ -1.64
HPS3Q969F9 RPL21P103-201ENST00000479921 488 ntBASIC4.8□□□□□ -1.64
HPS3Q969F9 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.8□□□□□ -1.64
HPS3Q969F9 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC4.8□□□□□ -1.64
HPS3Q969F9 AC034222.1-201ENST00000494052 532 ntBASIC4.8□□□□□ -1.64
HPS3Q969F9 MTCO3P44-201ENST00000510977 541 ntBASIC4.8□□□□□ -1.64
HPS3Q969F9 AC079140.3-201ENST00000511111 550 ntBASIC4.8□□□□□ -1.64
HPS3Q969F9 FABP5P5-201ENST00000515537 406 ntBASIC4.8□□□□□ -1.64
HPS3Q969F9 AC093853.1-201ENST00000515689 483 ntBASIC4.8□□□□□ -1.64
HPS3Q969F9 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.8□□□□□ -1.64
HPS3Q969F9 IGKV2D-36-201ENST00000518643 226 ntBASIC4.8□□□□□ -1.64
HPS3Q969F9 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.8□□□□□ -1.64
HPS3Q969F9 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC4.8□□□□□ -1.64
HPS3Q969F9 PARP1P2-201ENST00000556806 195 ntBASIC4.8□□□□□ -1.64
HPS3Q969F9 MIR548AB-201ENST00000584917 84 ntBASIC4.8□□□□□ -1.64
HPS3Q969F9 TPMTP1-201ENST00000592307 737 ntBASIC4.8□□□□□ -1.64
HPS3Q969F9 AC022916.3-201ENST00000592961 742 ntBASIC4.8□□□□□ -1.64
HPS3Q969F9 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC4.8□□□□□ -1.64
HPS3Q969F9 AC100793.4-201ENST00000613683 429 ntBASIC4.8□□□□□ -1.64
HPS3Q969F9 AL590240.3-201ENST00000621416 943 ntBASIC4.8□□□□□ -1.64
HPS3Q969F9 AL445363.3-201ENST00000623080 671 ntBASIC4.8□□□□□ -1.64
HPS3Q969F9 AP006248.2-201ENST00000623309 592 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms