Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 AC103783.1-201ENST00000520506 373 ntBASIC3.57□□□□□ -1.84
PTP4A1Q93096 AC022690.1-201ENST00000526681 550 ntBASIC3.57□□□□□ -1.84
PTP4A1Q93096 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.57□□□□□ -1.84
PTP4A1Q93096 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PTP4A1Q93096 MED28P6-201ENST00000558776 231 ntBASIC3.57□□□□□ -1.84
PTP4A1Q93096 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.57□□□□□ -1.84
PTP4A1Q93096 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.57□□□□□ -1.84
PTP4A1Q93096 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.57□□□□□ -1.84
PTP4A1Q93096 AC090615.1-201ENST00000577519 154 ntBASIC3.57□□□□□ -1.84
PTP4A1Q93096 RN7SL339P-201ENST00000580597 296 ntBASIC3.57□□□□□ -1.84
PTP4A1Q93096 MIR3939-201ENST00000582614 106 ntBASIC3.57□□□□□ -1.84
PTP4A1Q93096 AC006254.3-201ENST00000603353 884 ntBASIC3.57□□□□□ -1.84
PTP4A1Q93096 AC005962.2-201ENST00000611427 652 ntBASIC3.57□□□□□ -1.84
PTP4A1Q93096 DUXAP10-204ENST00000612052 616 ntBASIC3.57□□□□□ -1.84
PTP4A1Q93096 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.57□□□□□ -1.84
PTP4A1Q93096 AC006111.3-201ENST00000622137 383 ntBASIC3.57□□□□□ -1.84
PTP4A1Q93096 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.57□□□□□ -1.84
PTP4A1Q93096 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.57□□□□□ -1.84
PTP4A1Q93096 AC099654.8-201ENST00000637757 681 ntBASIC3.57□□□□□ -1.84
PTP4A1Q93096 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PTP4A1Q93096 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
PTP4A1Q93096 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PTP4A1Q93096 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PTP4A1Q93096 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.57□□□□□ -1.84
PTP4A1Q93096 AC005183.1-201ENST00000603687 1979 ntBASIC3.56□□□□□ -1.84
PTP4A1Q93096 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PTP4A1Q93096 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PTP4A1Q93096 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PTP4A1Q93096 AC021755.1-201ENST00000559747 1447 ntBASIC3.56□□□□□ -1.84
PTP4A1Q93096 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PTP4A1Q93096 SNORA62-201ENST00000365493 153 ntBASIC3.56□□□□□ -1.84
PTP4A1Q93096 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PTP4A1Q93096 HMGB1P17-201ENST00000403495 628 ntBASIC3.56□□□□□ -1.84
PTP4A1Q93096 FAT1P1-201ENST00000406588 507 ntBASIC3.56□□□□□ -1.84
PTP4A1Q93096 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.56□□□□□ -1.84
PTP4A1Q93096 RNU2-47P-201ENST00000410649 186 ntBASIC3.56□□□□□ -1.84
PTP4A1Q93096 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.56□□□□□ -1.84
PTP4A1Q93096 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PTP4A1Q93096 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC3.56□□□□□ -1.84
PTP4A1Q93096 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.56□□□□□ -1.84
PTP4A1Q93096 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PTP4A1Q93096 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.56□□□□□ -1.84
PTP4A1Q93096 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PTP4A1Q93096 AL359073.1-201ENST00000448036 403 ntBASIC3.56□□□□□ -1.84
PTP4A1Q93096 AL500522.2-201ENST00000448562 343 ntBASIC3.56□□□□□ -1.84
PTP4A1Q93096 AC005297.2-201ENST00000450430 606 ntBASIC3.56□□□□□ -1.84
PTP4A1Q93096 PTGES3P5-201ENST00000455109 434 ntBASIC3.56□□□□□ -1.84
PTP4A1Q93096 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PTP4A1Q93096 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.56□□□□□ -1.84
PTP4A1Q93096 AC023424.2-201ENST00000493479 777 ntBASIC3.56□□□□□ -1.84
PTP4A1Q93096 TMEM251P1-201ENST00000503717 318 ntBASIC3.56□□□□□ -1.84
PTP4A1Q93096 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.56□□□□□ -1.84
PTP4A1Q93096 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.56□□□□□ -1.84
PTP4A1Q93096 AC021451.1-201ENST00000523498 1129 ntBASIC3.56□□□□□ -1.84
PTP4A1Q93096 CYCSP29-201ENST00000533731 318 ntBASIC3.56□□□□□ -1.84
PTP4A1Q93096 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PTP4A1Q93096 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.56□□□□□ -1.84
PTP4A1Q93096 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.56□□□□□ -1.84
PTP4A1Q93096 AC023575.1-201ENST00000580510 358 ntBASIC3.56□□□□□ -1.84
PTP4A1Q93096 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.56□□□□□ -1.84
PTP4A1Q93096 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.56□□□□□ -1.84
PTP4A1Q93096 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.56□□□□□ -1.84
PTP4A1Q93096 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.56□□□□□ -1.84
PTP4A1Q93096 AC119501.1-201ENST00000603646 475 ntBASIC3.56□□□□□ -1.84
PTP4A1Q93096 AC069431.2-201ENST00000604149 1099 ntBASIC3.56□□□□□ -1.84
PTP4A1Q93096 AC009220.3-201ENST00000604318 586 ntBASIC3.56□□□□□ -1.84
PTP4A1Q93096 AC008962.1-201ENST00000605729 304 ntBASIC3.56□□□□□ -1.84
PTP4A1Q93096 MIR6716-201ENST00000613413 80 ntBASIC3.56□□□□□ -1.84
PTP4A1Q93096 AC010608.2-201ENST00000624830 470 ntBASIC3.56□□□□□ -1.84
PTP4A1Q93096 MIR6830-201ENST00000636015 70 ntBASIC3.56□□□□□ -1.84
PTP4A1Q93096 AL445984.1-201ENST00000637834 659 ntBASIC3.56□□□□□ -1.84
PTP4A1Q93096 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
PTP4A1Q93096 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.56□□□□□ -1.84
PTP4A1Q93096 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PTP4A1Q93096 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PTP4A1Q93096 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.55□□□□□ -1.84
PTP4A1Q93096 TAB3P1-202ENST00000452645 1634 ntBASIC3.55□□□□□ -1.84
PTP4A1Q93096 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PTP4A1Q93096 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PTP4A1Q93096 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PTP4A1Q93096 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PTP4A1Q93096 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PTP4A1Q93096 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.55□□□□□ -1.84
PTP4A1Q93096 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.55□□□□□ -1.84
PTP4A1Q93096 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
PTP4A1Q93096 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PTP4A1Q93096 RNU6-560P-201ENST00000364007 108 ntBASIC3.55□□□□□ -1.84
PTP4A1Q93096 RNU6-882P-201ENST00000391025 103 ntBASIC3.55□□□□□ -1.84
PTP4A1Q93096 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PTP4A1Q93096 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.55□□□□□ -1.84
PTP4A1Q93096 CCDC58P2-201ENST00000417131 366 ntBASIC3.55□□□□□ -1.84
PTP4A1Q93096 TIMM9P2-201ENST00000419324 266 ntBASIC3.55□□□□□ -1.84
PTP4A1Q93096 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.55□□□□□ -1.84
PTP4A1Q93096 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC3.55□□□□□ -1.84
PTP4A1Q93096 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.55□□□□□ -1.84
PTP4A1Q93096 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC3.55□□□□□ -1.84
PTP4A1Q93096 SDCBPP1-201ENST00000440192 890 ntBASIC3.55□□□□□ -1.84
PTP4A1Q93096 ARPC3P5-201ENST00000448802 534 ntBASIC3.55□□□□□ -1.84
PTP4A1Q93096 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.55□□□□□ -1.84
PTP4A1Q93096 MTATP6P14-201ENST00000455189 673 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms