Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
TOPBP1Q92547 AL138878.1-201ENST00000405131 347 ntBASIC4.01□□□□□ -1.77
TOPBP1Q92547 AMD1P2-201ENST00000412936 992 ntBASIC4.01□□□□□ -1.77
TOPBP1Q92547 AC018634.1-201ENST00000437554 401 ntBASIC4.01□□□□□ -1.77
TOPBP1Q92547 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC4.01□□□□□ -1.77
TOPBP1Q92547 AC119751.1-201ENST00000513357 765 ntBASIC4.01□□□□□ -1.77
TOPBP1Q92547 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC4.01□□□□□ -1.77
TOPBP1Q92547 EMP1-206ENST00000537612 505 ntTSL 3 BASIC4.01□□□□□ -1.77
TOPBP1Q92547 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC4.01□□□□□ -1.77
TOPBP1Q92547 AC104237.2-201ENST00000612456 443 ntBASIC4.01□□□□□ -1.77
TOPBP1Q92547 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
TOPBP1Q92547 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
TOPBP1Q92547 AC002543.1-201ENST00000299783 1954 ntBASIC4□□□□□ -1.77
TOPBP1Q92547 MIR148B-201ENST00000362252 99 ntBASIC4□□□□□ -1.77
TOPBP1Q92547 Y_RNA.226-201ENST00000364337 114 ntBASIC4□□□□□ -1.77
TOPBP1Q92547 SNORA64-201ENST00000384674 134 ntBASIC4□□□□□ -1.77
TOPBP1Q92547 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
TOPBP1Q92547 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4□□□□□ -1.77
TOPBP1Q92547 AC010881.1-201ENST00000433830 235 ntBASIC4□□□□□ -1.77
TOPBP1Q92547 AC013410.1-201ENST00000436223 1232 ntBASIC4□□□□□ -1.77
TOPBP1Q92547 AC104389.3-201ENST00000445629 235 ntBASIC4□□□□□ -1.77
TOPBP1Q92547 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC4□□□□□ -1.77
TOPBP1Q92547 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC4□□□□□ -1.77
TOPBP1Q92547 OR5BN1P-201ENST00000532955 829 ntBASIC4□□□□□ -1.77
TOPBP1Q92547 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4□□□□□ -1.77
TOPBP1Q92547 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC4□□□□□ -1.77
TOPBP1Q92547 AC011492.1-201ENST00000600023 315 ntBASIC4□□□□□ -1.77
TOPBP1Q92547 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
TOPBP1Q92547 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4□□□□□ -1.77
TOPBP1Q92547 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC4□□□□□ -1.77
TOPBP1Q92547 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
TOPBP1Q92547 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC4□□□□□ -1.77
TOPBP1Q92547 MDM4-202ENST00000367180 547 ntTSL 3 BASIC4□□□□□ -1.77
TOPBP1Q92547 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC4□□□□□ -1.77
TOPBP1Q92547 LDHBP3-201ENST00000514909 822 ntBASIC4□□□□□ -1.77
TOPBP1Q92547 AC123904.3-201ENST00000547218 814 ntBASIC4□□□□□ -1.77
TOPBP1Q92547 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4□□□□□ -1.77
TOPBP1Q92547 AP000942.3-201ENST00000603702 160 ntBASIC4□□□□□ -1.77
TOPBP1Q92547 AL512646.1-201ENST00000269395 1077 ntBASIC3.99□□□□□ -1.77
TOPBP1Q92547 RNA5SP210-201ENST00000391034 120 ntBASIC3.99□□□□□ -1.77
TOPBP1Q92547 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC3.99□□□□□ -1.77
TOPBP1Q92547 AC106872.3-201ENST00000495104 446 ntBASIC3.99□□□□□ -1.77
TOPBP1Q92547 KCTD9P5-201ENST00000504141 1170 ntBASIC3.99□□□□□ -1.77
TOPBP1Q92547 AC116337.1-201ENST00000509680 687 ntBASIC3.99□□□□□ -1.77
TOPBP1Q92547 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.99□□□□□ -1.77
TOPBP1Q92547 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.99□□□□□ -1.77
TOPBP1Q92547 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.99□□□□□ -1.77
TOPBP1Q92547 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
TOPBP1Q92547 MIR5007-201ENST00000583098 95 ntBASIC3.99□□□□□ -1.77
TOPBP1Q92547 AC078899.5-201ENST00000612475 178 ntBASIC3.99□□□□□ -1.77
TOPBP1Q92547 AC132825.8-201ENST00000640783 297 ntBASIC3.99□□□□□ -1.77
TOPBP1Q92547 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
TOPBP1Q92547 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
TOPBP1Q92547 AC022336.2-201ENST00000568966 2538 ntBASIC3.98□□□□□ -1.77
TOPBP1Q92547 U8.13-201ENST00000390842 128 ntBASIC3.98□□□□□ -1.77
TOPBP1Q92547 AL590004.2-201ENST00000404787 371 ntBASIC3.98□□□□□ -1.77
TOPBP1Q92547 RANP7-201ENST00000418085 644 ntBASIC3.98□□□□□ -1.77
TOPBP1Q92547 MORF4L1P6-201ENST00000418771 268 ntBASIC3.98□□□□□ -1.77
TOPBP1Q92547 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.98□□□□□ -1.77
TOPBP1Q92547 AL024509.2-201ENST00000493462 493 ntBASIC3.98□□□□□ -1.77
TOPBP1Q92547 AC104090.1-201ENST00000506341 1171 ntBASIC3.98□□□□□ -1.77
TOPBP1Q92547 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.98□□□□□ -1.77
TOPBP1Q92547 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.98□□□□□ -1.77
TOPBP1Q92547 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
TOPBP1Q92547 SNRPGP18-201ENST00000553000 214 ntBASIC3.98□□□□□ -1.77
TOPBP1Q92547 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
TOPBP1Q92547 MIR5092-201ENST00000583139 88 ntBASIC3.98□□□□□ -1.77
TOPBP1Q92547 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.98□□□□□ -1.77
TOPBP1Q92547 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
TOPBP1Q92547 CUL1P1-201ENST00000509510 2425 ntBASIC3.98□□□□□ -1.77
TOPBP1Q92547 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
TOPBP1Q92547 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.97□□□□□ -1.77
TOPBP1Q92547 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
TOPBP1Q92547 RNU6-1159P-201ENST00000362933 107 ntBASIC3.97□□□□□ -1.77
TOPBP1Q92547 RPS20P25-201ENST00000412447 352 ntBASIC3.97□□□□□ -1.77
TOPBP1Q92547 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.97□□□□□ -1.77
TOPBP1Q92547 VN1R17P-201ENST00000472048 1090 ntBASIC3.97□□□□□ -1.77
TOPBP1Q92547 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.97□□□□□ -1.77
TOPBP1Q92547 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC3.97□□□□□ -1.77
TOPBP1Q92547 AC112673.1-201ENST00000513168 575 ntBASIC3.97□□□□□ -1.77
TOPBP1Q92547 BNIP3P8-201ENST00000597863 560 ntBASIC3.97□□□□□ -1.77
TOPBP1Q92547 RNU6-84P-201ENST00000607737 102 ntBASIC3.97□□□□□ -1.77
TOPBP1Q92547 MIR6873-201ENST00000622788 63 ntBASIC3.97□□□□□ -1.77
TOPBP1Q92547 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
TOPBP1Q92547 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC3.97□□□□□ -1.77
TOPBP1Q92547 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
TOPBP1Q92547 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
TOPBP1Q92547 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
TOPBP1Q92547 MTCO3P11-201ENST00000455103 774 ntBASIC3.96□□□□□ -1.78
TOPBP1Q92547 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
TOPBP1Q92547 RNU6-1231P-201ENST00000517185 103 ntBASIC3.96□□□□□ -1.78
TOPBP1Q92547 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.96□□□□□ -1.78
TOPBP1Q92547 AP001004.1-201ENST00000582468 324 ntBASIC3.96□□□□□ -1.78
TOPBP1Q92547 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
TOPBP1Q92547 AC093908.1-201ENST00000623125 8092 ntBASIC3.96□□□□□ -1.78
TOPBP1Q92547 ADAM3A-203ENST00000461344 2157 ntBASIC3.96□□□□□ -1.78
TOPBP1Q92547 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.96□□□□□ -1.78
TOPBP1Q92547 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.96□□□□□ -1.78
TOPBP1Q92547 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
TOPBP1Q92547 AL356292.1-201ENST00000283110 373 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 192.3 ms