Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC6.16□□□□□ -1.42
NEDD1Q8NHV4 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.16□□□□□ -1.42
NEDD1Q8NHV4 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC6.16□□□□□ -1.42
NEDD1Q8NHV4 TEK-205ENST00000615002 4666 ntTSL 5 BASIC6.16□□□□□ -1.42
NEDD1Q8NHV4 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC6.16□□□□□ -1.42
NEDD1Q8NHV4 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
NEDD1Q8NHV4 RNU6-200P-201ENST00000364743 107 ntBASIC6.16□□□□□ -1.42
NEDD1Q8NHV4 RNA5SP90-201ENST00000364801 99 ntBASIC6.16□□□□□ -1.42
NEDD1Q8NHV4 RNU6-730P-201ENST00000383954 104 ntBASIC6.16□□□□□ -1.42
NEDD1Q8NHV4 MIR600-201ENST00000385007 98 ntBASIC6.16□□□□□ -1.42
NEDD1Q8NHV4 SNORA11B-201ENST00000408175 129 ntBASIC6.16□□□□□ -1.42
NEDD1Q8NHV4 AC073264.1-201ENST00000411508 416 ntBASIC6.16□□□□□ -1.42
NEDD1Q8NHV4 AL590806.1-201ENST00000415818 853 ntBASIC6.16□□□□□ -1.42
NEDD1Q8NHV4 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
NEDD1Q8NHV4 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC6.16□□□□□ -1.42
NEDD1Q8NHV4 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC6.16□□□□□ -1.42
NEDD1Q8NHV4 COX6CP15-201ENST00000426313 211 ntBASIC6.16□□□□□ -1.42
NEDD1Q8NHV4 AC092013.1-201ENST00000438795 332 ntBASIC6.16□□□□□ -1.42
NEDD1Q8NHV4 NOP56P2-201ENST00000447491 769 ntBASIC6.16□□□□□ -1.42
NEDD1Q8NHV4 OR1H1P-201ENST00000448731 937 ntBASIC6.16□□□□□ -1.42
NEDD1Q8NHV4 AC092647.2-201ENST00000452998 253 ntBASIC6.16□□□□□ -1.42
NEDD1Q8NHV4 RN7SL329P-201ENST00000467740 299 ntBASIC6.16□□□□□ -1.42
NEDD1Q8NHV4 AP000797.2-201ENST00000475768 606 ntBASIC6.16□□□□□ -1.42
NEDD1Q8NHV4 RPL7AP6-201ENST00000477943 801 ntBASIC6.16□□□□□ -1.42
NEDD1Q8NHV4 AC092451.1-201ENST00000480211 153 ntBASIC6.16□□□□□ -1.42
NEDD1Q8NHV4 AC093270.2-201ENST00000486157 792 ntBASIC6.16□□□□□ -1.42
NEDD1Q8NHV4 RPS24P16-201ENST00000497294 392 ntBASIC6.16□□□□□ -1.42
NEDD1Q8NHV4 SLC25A15P5-201ENST00000508033 253 ntBASIC6.16□□□□□ -1.42
NEDD1Q8NHV4 AC002456.2-201ENST00000509356 380 ntBASIC6.16□□□□□ -1.42
NEDD1Q8NHV4 AC006427.1-201ENST00000514359 712 ntBASIC6.16□□□□□ -1.42
NEDD1Q8NHV4 Y_RNA.661-201ENST00000516003 99 ntBASIC6.16□□□□□ -1.42
NEDD1Q8NHV4 RNU6ATAC24P-201ENST00000516811 135 ntBASIC6.16□□□□□ -1.42
NEDD1Q8NHV4 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC6.16□□□□□ -1.42
NEDD1Q8NHV4 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC6.16□□□□□ -1.42
NEDD1Q8NHV4 MIR3133-201ENST00000583157 78 ntBASIC6.16□□□□□ -1.42
NEDD1Q8NHV4 AC011468.4-201ENST00000603942 409 ntBASIC6.16□□□□□ -1.42
NEDD1Q8NHV4 AL391813.2-201ENST00000609113 322 ntBASIC6.16□□□□□ -1.42
NEDD1Q8NHV4 AC012409.4-201ENST00000612923 249 ntBASIC6.16□□□□□ -1.42
NEDD1Q8NHV4 AC009237.17-201ENST00000618111 748 ntBASIC6.16□□□□□ -1.42
NEDD1Q8NHV4 AC068870.2-201ENST00000620635 389 ntBASIC6.16□□□□□ -1.42
NEDD1Q8NHV4 AC091953.5-201ENST00000622919 233 ntBASIC6.16□□□□□ -1.42
NEDD1Q8NHV4 AC091953.2-201ENST00000623979 160 ntBASIC6.16□□□□□ -1.42
NEDD1Q8NHV4 AL732372.2-225ENST00000642124 456 ntBASIC6.16□□□□□ -1.42
NEDD1Q8NHV4 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
NEDD1Q8NHV4 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
NEDD1Q8NHV4 AL158163.1-201ENST00000603915 1649 ntBASIC6.16□□□□□ -1.42
NEDD1Q8NHV4 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
NEDD1Q8NHV4 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
NEDD1Q8NHV4 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC6.16□□□□□ -1.42
NEDD1Q8NHV4 AC114947.2-201ENST00000565748 2125 ntBASIC6.16□□□□□ -1.42
NEDD1Q8NHV4 ANKRD36BP1-201ENST00000358576 1779 ntBASIC6.16□□□□□ -1.42
NEDD1Q8NHV4 AC010615.1-201ENST00000594254 1764 ntBASIC6.16□□□□□ -1.42
NEDD1Q8NHV4 GTF2H2B-203ENST00000508065 1432 ntBASIC6.16□□□□□ -1.42
NEDD1Q8NHV4 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
NEDD1Q8NHV4 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC6.16□□□□□ -1.42
NEDD1Q8NHV4 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
NEDD1Q8NHV4 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
NEDD1Q8NHV4 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
NEDD1Q8NHV4 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
NEDD1Q8NHV4 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
NEDD1Q8NHV4 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC6.15□□□□□ -1.42
NEDD1Q8NHV4 AC003985.2-201ENST00000562268 1669 ntBASIC6.15□□□□□ -1.42
NEDD1Q8NHV4 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC6.15□□□□□ -1.42
NEDD1Q8NHV4 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
NEDD1Q8NHV4 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
NEDD1Q8NHV4 RNA5SP305-201ENST00000362665 119 ntBASIC6.15□□□□□ -1.42
NEDD1Q8NHV4 Y_RNA.150-201ENST00000363562 102 ntBASIC6.15□□□□□ -1.42
NEDD1Q8NHV4 Y_RNA.167-201ENST00000363735 109 ntBASIC6.15□□□□□ -1.42
NEDD1Q8NHV4 RNU6-450P-201ENST00000364654 107 ntBASIC6.15□□□□□ -1.42
NEDD1Q8NHV4 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
NEDD1Q8NHV4 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC6.15□□□□□ -1.42
NEDD1Q8NHV4 AC243428.1-201ENST00000421099 264 ntBASIC6.15□□□□□ -1.42
NEDD1Q8NHV4 PGBD4P6-201ENST00000421501 610 ntBASIC6.15□□□□□ -1.42
NEDD1Q8NHV4 AL590135.1-201ENST00000422215 156 ntBASIC6.15□□□□□ -1.42
NEDD1Q8NHV4 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC6.15□□□□□ -1.42
NEDD1Q8NHV4 BX276092.6-201ENST00000430476 250 ntBASIC6.15□□□□□ -1.42
NEDD1Q8NHV4 AF228730.2-201ENST00000438784 848 ntBASIC6.15□□□□□ -1.42
NEDD1Q8NHV4 AL121871.1-201ENST00000443413 436 ntBASIC6.15□□□□□ -1.42
NEDD1Q8NHV4 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC6.15□□□□□ -1.42
NEDD1Q8NHV4 EIF4EBP2P1-201ENST00000450009 343 ntBASIC6.15□□□□□ -1.42
NEDD1Q8NHV4 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC6.15□□□□□ -1.42
NEDD1Q8NHV4 BX276092.8-201ENST00000455722 250 ntBASIC6.15□□□□□ -1.42
NEDD1Q8NHV4 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC6.15□□□□□ -1.42
NEDD1Q8NHV4 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC6.15□□□□□ -1.42
NEDD1Q8NHV4 AC026784.1-201ENST00000507986 352 ntBASIC6.15□□□□□ -1.42
NEDD1Q8NHV4 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC6.15□□□□□ -1.42
NEDD1Q8NHV4 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC6.15□□□□□ -1.42
NEDD1Q8NHV4 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC6.15□□□□□ -1.42
NEDD1Q8NHV4 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
NEDD1Q8NHV4 MIR4790-201ENST00000577799 79 ntBASIC6.15□□□□□ -1.42
NEDD1Q8NHV4 RN7SL708P-201ENST00000580952 299 ntBASIC6.15□□□□□ -1.42
NEDD1Q8NHV4 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC6.15□□□□□ -1.42
NEDD1Q8NHV4 AL022099.1-201ENST00000604551 712 ntBASIC6.15□□□□□ -1.42
NEDD1Q8NHV4 RNU6-84P-201ENST00000607737 102 ntBASIC6.15□□□□□ -1.42
NEDD1Q8NHV4 PLCE1P1-201ENST00000622094 305 ntBASIC6.15□□□□□ -1.42
NEDD1Q8NHV4 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC6.15□□□□□ -1.42
NEDD1Q8NHV4 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.43
NEDD1Q8NHV4 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
NEDD1Q8NHV4 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC6.15□□□□□ -1.43
NEDD1Q8NHV4 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms