Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.06□□□□□ -1.92
CLHC1Q8NHS4 AC092474.3-201ENST00000603022 568 ntBASIC3.06□□□□□ -1.92
CLHC1Q8NHS4 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.06□□□□□ -1.92
CLHC1Q8NHS4 AL591516.1-201ENST00000611326 274 ntBASIC3.06□□□□□ -1.92
CLHC1Q8NHS4 AL354976.1-201ENST00000613843 387 ntBASIC3.06□□□□□ -1.92
CLHC1Q8NHS4 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.05□□□□□ -1.92
CLHC1Q8NHS4 AC046144.1-201ENST00000478559 1853 ntBASIC3.05□□□□□ -1.92
CLHC1Q8NHS4 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.05□□□□□ -1.92
CLHC1Q8NHS4 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.05□□□□□ -1.92
CLHC1Q8NHS4 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
CLHC1Q8NHS4 U3.11-201ENST00000364476 212 ntBASIC3.05□□□□□ -1.92
CLHC1Q8NHS4 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
CLHC1Q8NHS4 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CLHC1Q8NHS4 RPS7P15-201ENST00000415804 584 ntBASIC3.05□□□□□ -1.92
CLHC1Q8NHS4 RPL21P32-201ENST00000419877 477 ntBASIC3.05□□□□□ -1.92
CLHC1Q8NHS4 UBE2V1P6-201ENST00000430840 422 ntBASIC3.05□□□□□ -1.92
CLHC1Q8NHS4 VN1R34P-201ENST00000447387 883 ntBASIC3.05□□□□□ -1.92
CLHC1Q8NHS4 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.05□□□□□ -1.92
CLHC1Q8NHS4 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.05□□□□□ -1.92
CLHC1Q8NHS4 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC3.05□□□□□ -1.92
CLHC1Q8NHS4 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC3.05□□□□□ -1.92
CLHC1Q8NHS4 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.05□□□□□ -1.92
CLHC1Q8NHS4 AC091564.1-201ENST00000464563 479 ntBASIC3.05□□□□□ -1.92
CLHC1Q8NHS4 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.05□□□□□ -1.92
CLHC1Q8NHS4 MTCO1P31-201ENST00000506355 492 ntBASIC3.05□□□□□ -1.92
CLHC1Q8NHS4 OSBPL9P3-201ENST00000534523 595 ntBASIC3.05□□□□□ -1.92
CLHC1Q8NHS4 AC092470.1-201ENST00000546187 132 ntBASIC3.05□□□□□ -1.92
CLHC1Q8NHS4 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.05□□□□□ -1.92
CLHC1Q8NHS4 AC012414.2-201ENST00000559474 187 ntBASIC3.05□□□□□ -1.92
CLHC1Q8NHS4 EIF5A2P1-201ENST00000564027 460 ntBASIC3.05□□□□□ -1.92
CLHC1Q8NHS4 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.05□□□□□ -1.92
CLHC1Q8NHS4 DUXAP4-201ENST00000603046 613 ntBASIC3.05□□□□□ -1.92
CLHC1Q8NHS4 DPRXP5-201ENST00000604662 539 ntBASIC3.05□□□□□ -1.92
CLHC1Q8NHS4 uc_338.25-201ENST00000613756 156 ntBASIC3.05□□□□□ -1.92
CLHC1Q8NHS4 AL355365.1-201ENST00000616480 294 ntBASIC3.05□□□□□ -1.92
CLHC1Q8NHS4 AC097372.4-201ENST00000625025 466 ntBASIC3.05□□□□□ -1.92
CLHC1Q8NHS4 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.05□□□□□ -1.92
CLHC1Q8NHS4 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.05□□□□□ -1.92
CLHC1Q8NHS4 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
CLHC1Q8NHS4 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.05□□□□□ -1.92
CLHC1Q8NHS4 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CLHC1Q8NHS4 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
CLHC1Q8NHS4 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.04□□□□□ -1.92
CLHC1Q8NHS4 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CLHC1Q8NHS4 Z83843.1-201ENST00000604070 3685 ntBASIC3.04□□□□□ -1.92
CLHC1Q8NHS4 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.04□□□□□ -1.92
CLHC1Q8NHS4 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CLHC1Q8NHS4 U3.6-201ENST00000363622 211 ntBASIC3.04□□□□□ -1.92
CLHC1Q8NHS4 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CLHC1Q8NHS4 RNA5SP38-201ENST00000410750 119 ntBASIC3.04□□□□□ -1.92
CLHC1Q8NHS4 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.04□□□□□ -1.92
CLHC1Q8NHS4 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.04□□□□□ -1.92
CLHC1Q8NHS4 ARL4AP4-201ENST00000434170 518 ntBASIC3.04□□□□□ -1.92
CLHC1Q8NHS4 RPL23AP58-201ENST00000440453 469 ntBASIC3.04□□□□□ -1.92
CLHC1Q8NHS4 AL513321.1-201ENST00000441175 761 ntBASIC3.04□□□□□ -1.92
CLHC1Q8NHS4 HMGB3P6-201ENST00000444896 598 ntBASIC3.04□□□□□ -1.92
CLHC1Q8NHS4 ZNF736P6Y-201ENST00000447526 1213 ntBASIC3.04□□□□□ -1.92
CLHC1Q8NHS4 AC008280.2-201ENST00000455473 307 ntBASIC3.04□□□□□ -1.92
CLHC1Q8NHS4 ST13P14-201ENST00000474095 734 ntBASIC3.04□□□□□ -1.92
CLHC1Q8NHS4 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.04□□□□□ -1.92
CLHC1Q8NHS4 POU5F1P7-201ENST00000508759 541 ntBASIC3.04□□□□□ -1.92
CLHC1Q8NHS4 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.04□□□□□ -1.92
CLHC1Q8NHS4 AC026412.2-201ENST00000512270 1075 ntBASIC3.04□□□□□ -1.92
CLHC1Q8NHS4 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.04□□□□□ -1.92
CLHC1Q8NHS4 AC245166.1-201ENST00000521012 253 ntBASIC3.04□□□□□ -1.92
CLHC1Q8NHS4 NOP56P3-201ENST00000549457 385 ntBASIC3.04□□□□□ -1.92
CLHC1Q8NHS4 AL391156.1-201ENST00000554965 554 ntBASIC3.04□□□□□ -1.92
CLHC1Q8NHS4 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.04□□□□□ -1.92
CLHC1Q8NHS4 MIR2682-201ENST00000580305 110 ntBASIC3.04□□□□□ -1.92
CLHC1Q8NHS4 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.04□□□□□ -1.92
CLHC1Q8NHS4 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.04□□□□□ -1.92
CLHC1Q8NHS4 AC008687.2-201ENST00000597865 520 ntBASIC3.04□□□□□ -1.92
CLHC1Q8NHS4 AC078899.3-201ENST00000599065 212 ntBASIC3.04□□□□□ -1.92
CLHC1Q8NHS4 AC106791.2-201ENST00000604680 391 ntBASIC3.04□□□□□ -1.92
CLHC1Q8NHS4 AC100793.4-201ENST00000613683 429 ntBASIC3.04□□□□□ -1.92
CLHC1Q8NHS4 AC009464.1-201ENST00000615731 469 ntBASIC3.04□□□□□ -1.92
CLHC1Q8NHS4 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC3.04□□□□□ -1.92
CLHC1Q8NHS4 AC018926.3-201ENST00000618841 406 ntBASIC3.04□□□□□ -1.92
CLHC1Q8NHS4 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.04□□□□□ -1.92
CLHC1Q8NHS4 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.04□□□□□ -1.92
CLHC1Q8NHS4 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CLHC1Q8NHS4 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CLHC1Q8NHS4 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.04□□□□□ -1.92
CLHC1Q8NHS4 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CLHC1Q8NHS4 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
CLHC1Q8NHS4 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.04□□□□□ -1.92
CLHC1Q8NHS4 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.04□□□□□ -1.92
CLHC1Q8NHS4 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.04□□□□□ -1.92
CLHC1Q8NHS4 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.03□□□□□ -1.92
CLHC1Q8NHS4 AC233263.6-201ENST00000631132 1963 ntBASIC3.03□□□□□ -1.92
CLHC1Q8NHS4 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
CLHC1Q8NHS4 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.03□□□□□ -1.92
CLHC1Q8NHS4 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.03□□□□□ -1.92
CLHC1Q8NHS4 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CLHC1Q8NHS4 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3.03□□□□□ -1.92
CLHC1Q8NHS4 RNA5SP258-201ENST00000362750 119 ntBASIC3.03□□□□□ -1.92
CLHC1Q8NHS4 RNU6-40P-201ENST00000384254 107 ntBASIC3.03□□□□□ -1.92
CLHC1Q8NHS4 MIR887-201ENST00000401258 79 ntBASIC3.03□□□□□ -1.92
CLHC1Q8NHS4 SSXP9-201ENST00000417503 292 ntBASIC3.03□□□□□ -1.92
CLHC1Q8NHS4 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms