Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 EIF5P1-201ENST00000400019 1231 ntBASIC5.31□□□□□ -1.56
SMC1BQ8NDV3 AC069218.2-201ENST00000411665 344 ntBASIC5.31□□□□□ -1.56
SMC1BQ8NDV3 RPL23AP74-201ENST00000437246 471 ntBASIC5.31□□□□□ -1.56
SMC1BQ8NDV3 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC5.31□□□□□ -1.56
SMC1BQ8NDV3 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC5.31□□□□□ -1.56
SMC1BQ8NDV3 TPT1P7-201ENST00000458300 517 ntBASIC5.31□□□□□ -1.56
SMC1BQ8NDV3 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC5.31□□□□□ -1.56
SMC1BQ8NDV3 RN7SL691P-201ENST00000494487 301 ntBASIC5.31□□□□□ -1.56
SMC1BQ8NDV3 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC5.31□□□□□ -1.56
SMC1BQ8NDV3 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC5.31□□□□□ -1.56
SMC1BQ8NDV3 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC5.31□□□□□ -1.56
SMC1BQ8NDV3 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
SMC1BQ8NDV3 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC5.31□□□□□ -1.56
SMC1BQ8NDV3 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC5.31□□□□□ -1.56
SMC1BQ8NDV3 AC013828.2-201ENST00000532487 235 ntBASIC5.31□□□□□ -1.56
SMC1BQ8NDV3 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC5.31□□□□□ -1.56
SMC1BQ8NDV3 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC5.31□□□□□ -1.56
SMC1BQ8NDV3 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC5.31□□□□□ -1.56
SMC1BQ8NDV3 AL606490.9-201ENST00000603331 271 ntBASIC5.31□□□□□ -1.56
SMC1BQ8NDV3 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SMC1BQ8NDV3 AL121772.2-201ENST00000614331 297 ntBASIC5.31□□□□□ -1.56
SMC1BQ8NDV3 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.31□□□□□ -1.56
SMC1BQ8NDV3 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.31□□□□□ -1.56
SMC1BQ8NDV3 AC107027.3-201ENST00000565095 3473 ntBASIC5.31□□□□□ -1.56
SMC1BQ8NDV3 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC5.31□□□□□ -1.56
SMC1BQ8NDV3 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.31□□□□□ -1.56
SMC1BQ8NDV3 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
SMC1BQ8NDV3 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
SMC1BQ8NDV3 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
SMC1BQ8NDV3 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC5.3□□□□□ -1.56
SMC1BQ8NDV3 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SMC1BQ8NDV3 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
SMC1BQ8NDV3 AC005332.5-201ENST00000591222 2919 ntBASIC5.3□□□□□ -1.56
SMC1BQ8NDV3 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SMC1BQ8NDV3 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC5.3□□□□□ -1.56
SMC1BQ8NDV3 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SMC1BQ8NDV3 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
SMC1BQ8NDV3 SNORA51.6-201ENST00000384151 125 ntBASIC5.3□□□□□ -1.56
SMC1BQ8NDV3 RNU6-517P-201ENST00000384362 110 ntBASIC5.3□□□□□ -1.56
SMC1BQ8NDV3 RNU6-178P-201ENST00000384631 104 ntBASIC5.3□□□□□ -1.56
SMC1BQ8NDV3 ENSAP1-201ENST00000392855 326 ntBASIC5.3□□□□□ -1.56
SMC1BQ8NDV3 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC5.3□□□□□ -1.56
SMC1BQ8NDV3 UBE2V1P10-201ENST00000414685 269 ntBASIC5.3□□□□□ -1.56
SMC1BQ8NDV3 FNDC3CP-201ENST00000420795 1155 ntBASIC5.3□□□□□ -1.56
SMC1BQ8NDV3 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC5.3□□□□□ -1.56
SMC1BQ8NDV3 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC5.3□□□□□ -1.56
SMC1BQ8NDV3 RPL23AP52-201ENST00000439311 478 ntBASIC5.3□□□□□ -1.56
SMC1BQ8NDV3 AL450263.2-201ENST00000439400 589 ntBASIC5.3□□□□□ -1.56
SMC1BQ8NDV3 MTCO2P3-201ENST00000442543 421 ntBASIC5.3□□□□□ -1.56
SMC1BQ8NDV3 RPL23AP43-201ENST00000446445 471 ntBASIC5.3□□□□□ -1.56
SMC1BQ8NDV3 AL031584.1-201ENST00000447169 754 ntBASIC5.3□□□□□ -1.56
SMC1BQ8NDV3 RPL7P31-201ENST00000450192 724 ntBASIC5.3□□□□□ -1.56
SMC1BQ8NDV3 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.3□□□□□ -1.56
SMC1BQ8NDV3 NDUFAF4P4-201ENST00000454883 502 ntBASIC5.3□□□□□ -1.56
SMC1BQ8NDV3 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.3□□□□□ -1.56
SMC1BQ8NDV3 ACTR3P3-201ENST00000480448 893 ntBASIC5.3□□□□□ -1.56
SMC1BQ8NDV3 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC5.3□□□□□ -1.56
SMC1BQ8NDV3 TMEM251P1-201ENST00000503717 318 ntBASIC5.3□□□□□ -1.56
SMC1BQ8NDV3 RN7SKP298-201ENST00000515950 94 ntBASIC5.3□□□□□ -1.56
SMC1BQ8NDV3 AC104986.1-201ENST00000517978 436 ntBASIC5.3□□□□□ -1.56
SMC1BQ8NDV3 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC5.3□□□□□ -1.56
SMC1BQ8NDV3 DYNLL1P4-201ENST00000549314 266 ntBASIC5.3□□□□□ -1.56
SMC1BQ8NDV3 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC5.3□□□□□ -1.56
SMC1BQ8NDV3 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC5.3□□□□□ -1.56
SMC1BQ8NDV3 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC5.3□□□□□ -1.56
SMC1BQ8NDV3 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
SMC1BQ8NDV3 MTATP6P3-201ENST00000581686 676 ntBASIC5.3□□□□□ -1.56
SMC1BQ8NDV3 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC5.3□□□□□ -1.56
SMC1BQ8NDV3 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC5.3□□□□□ -1.56
SMC1BQ8NDV3 AL161729.3-201ENST00000603533 673 ntBASIC5.3□□□□□ -1.56
SMC1BQ8NDV3 AC080013.4-201ENST00000607624 649 ntBASIC5.3□□□□□ -1.56
SMC1BQ8NDV3 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
SMC1BQ8NDV3 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC5.3□□□□□ -1.56
SMC1BQ8NDV3 AC009093.8-201ENST00000641769 292 ntBASIC5.3□□□□□ -1.56
SMC1BQ8NDV3 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.3□□□□□ -1.56
SMC1BQ8NDV3 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
SMC1BQ8NDV3 AL592182.3-201ENST00000642132 3304 ntBASIC5.3□□□□□ -1.56
SMC1BQ8NDV3 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.3□□□□□ -1.56
SMC1BQ8NDV3 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SMC1BQ8NDV3 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC5.3□□□□□ -1.56
SMC1BQ8NDV3 Z95327.2-201ENST00000414579 1873 ntBASIC5.3□□□□□ -1.56
SMC1BQ8NDV3 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC5.3□□□□□ -1.56
SMC1BQ8NDV3 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
SMC1BQ8NDV3 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.29□□□□□ -1.56
SMC1BQ8NDV3 GHR-213ENST00000622294 4312 ntTSL 5 BASIC5.29□□□□□ -1.56
SMC1BQ8NDV3 AC097504.1-201ENST00000515103 2415 ntBASIC5.29□□□□□ -1.56
SMC1BQ8NDV3 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SMC1BQ8NDV3 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.29□□□□□ -1.56
SMC1BQ8NDV3 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SMC1BQ8NDV3 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC5.29□□□□□ -1.56
SMC1BQ8NDV3 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
SMC1BQ8NDV3 MAPK10-320ENST00000641462 6696 ntBASIC5.29□□□□□ -1.56
SMC1BQ8NDV3 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.29□□□□□ -1.56
SMC1BQ8NDV3 AL031119.1-201ENST00000404707 1879 ntBASIC5.29□□□□□ -1.56
SMC1BQ8NDV3 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
SMC1BQ8NDV3 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
SMC1BQ8NDV3 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SMC1BQ8NDV3 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC5.29□□□□□ -1.56
SMC1BQ8NDV3 RNU6-146P-201ENST00000384602 108 ntBASIC5.29□□□□□ -1.56
SMC1BQ8NDV3 SSXP10-201ENST00000402595 565 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms