Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 AL139095.3-201ENST00000419672 1203 ntBASIC4.6□□□□□ -1.67
SLC44A3Q8N4M1 CYP4F29P-201ENST00000420685 446 ntBASIC4.6□□□□□ -1.67
SLC44A3Q8N4M1 AL139413.1-201ENST00000421309 217 ntBASIC4.6□□□□□ -1.67
SLC44A3Q8N4M1 AC012498.1-201ENST00000424037 437 ntBASIC4.6□□□□□ -1.67
SLC44A3Q8N4M1 COX6CP15-201ENST00000426313 211 ntBASIC4.6□□□□□ -1.67
SLC44A3Q8N4M1 BX890604.2-201ENST00000427883 474 ntBASIC4.6□□□□□ -1.67
SLC44A3Q8N4M1 ZYG11AP1-201ENST00000430329 837 ntBASIC4.6□□□□□ -1.67
SLC44A3Q8N4M1 AL117339.2-201ENST00000430475 180 ntBASIC4.6□□□□□ -1.67
SLC44A3Q8N4M1 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.6□□□□□ -1.67
SLC44A3Q8N4M1 MTND4LP10-201ENST00000435146 291 ntBASIC4.6□□□□□ -1.67
SLC44A3Q8N4M1 RPL37P21-201ENST00000435890 276 ntBASIC4.6□□□□□ -1.67
SLC44A3Q8N4M1 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.6□□□□□ -1.67
SLC44A3Q8N4M1 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.6□□□□□ -1.67
SLC44A3Q8N4M1 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SLC44A3Q8N4M1 DPPA3P1-201ENST00000448050 469 ntBASIC4.6□□□□□ -1.67
SLC44A3Q8N4M1 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.6□□□□□ -1.67
SLC44A3Q8N4M1 USP9YP12-201ENST00000450481 570 ntBASIC4.6□□□□□ -1.67
SLC44A3Q8N4M1 OFD1P4Y-201ENST00000455273 1179 ntBASIC4.6□□□□□ -1.67
SLC44A3Q8N4M1 RPL23AP71-201ENST00000470966 469 ntBASIC4.6□□□□□ -1.67
SLC44A3Q8N4M1 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC4.6□□□□□ -1.67
SLC44A3Q8N4M1 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC4.6□□□□□ -1.67
SLC44A3Q8N4M1 AC021678.1-201ENST00000505195 936 ntBASIC4.6□□□□□ -1.67
SLC44A3Q8N4M1 ARL4AP2-201ENST00000507378 601 ntBASIC4.6□□□□□ -1.67
SLC44A3Q8N4M1 AC108064.1-201ENST00000513791 460 ntBASIC4.6□□□□□ -1.67
SLC44A3Q8N4M1 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC4.6□□□□□ -1.67
SLC44A3Q8N4M1 RN7SKP46-201ENST00000515942 234 ntBASIC4.6□□□□□ -1.67
SLC44A3Q8N4M1 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC4.6□□□□□ -1.67
SLC44A3Q8N4M1 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.6□□□□□ -1.67
SLC44A3Q8N4M1 AC008562.1-201ENST00000521763 330 ntBASIC4.6□□□□□ -1.67
SLC44A3Q8N4M1 OR5AQ1P-201ENST00000527596 927 ntBASIC4.6□□□□□ -1.67
SLC44A3Q8N4M1 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SLC44A3Q8N4M1 RAB11AP2-201ENST00000545905 639 ntBASIC4.6□□□□□ -1.67
SLC44A3Q8N4M1 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.6□□□□□ -1.67
SLC44A3Q8N4M1 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.6□□□□□ -1.67
SLC44A3Q8N4M1 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.6□□□□□ -1.67
SLC44A3Q8N4M1 AC005730.3-201ENST00000583067 366 ntBASIC4.6□□□□□ -1.67
SLC44A3Q8N4M1 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.6□□□□□ -1.67
SLC44A3Q8N4M1 AC112187.2-201ENST00000604345 283 ntBASIC4.6□□□□□ -1.67
SLC44A3Q8N4M1 AC112191.3-201ENST00000604371 277 ntBASIC4.6□□□□□ -1.67
SLC44A3Q8N4M1 Y_RNA.804-201ENST00000615262 101 ntBASIC4.6□□□□□ -1.67
SLC44A3Q8N4M1 AC063943.3-201ENST00000615562 356 ntBASIC4.6□□□□□ -1.67
SLC44A3Q8N4M1 AC104260.1-201ENST00000616660 539 ntBASIC4.6□□□□□ -1.67
SLC44A3Q8N4M1 AC007742.2-201ENST00000618226 398 ntBASIC4.6□□□□□ -1.67
SLC44A3Q8N4M1 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SLC44A3Q8N4M1 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.6□□□□□ -1.67
SLC44A3Q8N4M1 DCAF13P1-201ENST00000495256 1330 ntBASIC4.6□□□□□ -1.67
SLC44A3Q8N4M1 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.6□□□□□ -1.67
SLC44A3Q8N4M1 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.6□□□□□ -1.67
SLC44A3Q8N4M1 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
SLC44A3Q8N4M1 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
SLC44A3Q8N4M1 MTCO1P14-201ENST00000441695 1559 ntBASIC4.6□□□□□ -1.67
SLC44A3Q8N4M1 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
SLC44A3Q8N4M1 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
SLC44A3Q8N4M1 SCN1A-220ENST00000641603 12506 ntBASIC4.6□□□□□ -1.67
SLC44A3Q8N4M1 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.59□□□□□ -1.67
SLC44A3Q8N4M1 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SLC44A3Q8N4M1 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.59□□□□□ -1.67
SLC44A3Q8N4M1 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SLC44A3Q8N4M1 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.59□□□□□ -1.67
SLC44A3Q8N4M1 AL512646.1-201ENST00000269395 1077 ntBASIC4.59□□□□□ -1.67
SLC44A3Q8N4M1 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SLC44A3Q8N4M1 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.59□□□□□ -1.67
SLC44A3Q8N4M1 RNU6-251P-201ENST00000363235 104 ntBASIC4.59□□□□□ -1.67
SLC44A3Q8N4M1 RNU4-76P-201ENST00000364509 141 ntBASIC4.59□□□□□ -1.67
SLC44A3Q8N4M1 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.59□□□□□ -1.67
SLC44A3Q8N4M1 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.59□□□□□ -1.67
SLC44A3Q8N4M1 Y_RNA.453-201ENST00000384223 109 ntBASIC4.59□□□□□ -1.67
SLC44A3Q8N4M1 MIR554-201ENST00000384874 96 ntBASIC4.59□□□□□ -1.67
SLC44A3Q8N4M1 MIR3065-201ENST00000390137 79 ntBASIC4.59□□□□□ -1.67
SLC44A3Q8N4M1 U8.14-201ENST00000390843 143 ntBASIC4.59□□□□□ -1.67
SLC44A3Q8N4M1 VN1R8P-201ENST00000407739 893 ntBASIC4.59□□□□□ -1.67
SLC44A3Q8N4M1 U3.35-201ENST00000408405 208 ntBASIC4.59□□□□□ -1.67
SLC44A3Q8N4M1 RPS3AP3-201ENST00000411933 242 ntBASIC4.59□□□□□ -1.67
SLC44A3Q8N4M1 AL445487.1-201ENST00000415694 1580 ntBASIC4.59□□□□□ -1.67
SLC44A3Q8N4M1 AC083875.1-201ENST00000419509 405 ntBASIC4.59□□□□□ -1.67
SLC44A3Q8N4M1 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC4.59□□□□□ -1.67
SLC44A3Q8N4M1 AC069157.1-201ENST00000421749 137 ntBASIC4.59□□□□□ -1.67
SLC44A3Q8N4M1 RPL36AP10-201ENST00000421785 322 ntBASIC4.59□□□□□ -1.67
SLC44A3Q8N4M1 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.59□□□□□ -1.67
SLC44A3Q8N4M1 AC073069.1-201ENST00000428657 441 ntBASIC4.59□□□□□ -1.67
SLC44A3Q8N4M1 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC4.59□□□□□ -1.67
SLC44A3Q8N4M1 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.59□□□□□ -1.67
SLC44A3Q8N4M1 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC4.59□□□□□ -1.67
SLC44A3Q8N4M1 USP9YP8-201ENST00000441913 500 ntBASIC4.59□□□□□ -1.67
SLC44A3Q8N4M1 MTCO1P48-201ENST00000448024 1096 ntBASIC4.59□□□□□ -1.67
SLC44A3Q8N4M1 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC4.59□□□□□ -1.67
SLC44A3Q8N4M1 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC4.59□□□□□ -1.67
SLC44A3Q8N4M1 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.59□□□□□ -1.67
SLC44A3Q8N4M1 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC4.59□□□□□ -1.67
SLC44A3Q8N4M1 AP000852.1-201ENST00000472460 573 ntBASIC4.59□□□□□ -1.67
SLC44A3Q8N4M1 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
SLC44A3Q8N4M1 AC114981.1-201ENST00000503897 678 ntBASIC4.59□□□□□ -1.67
SLC44A3Q8N4M1 SNORA18.6-201ENST00000516792 115 ntBASIC4.59□□□□□ -1.67
SLC44A3Q8N4M1 RN7SKP283-201ENST00000517197 270 ntBASIC4.59□□□□□ -1.67
SLC44A3Q8N4M1 OR5BC1P-201ENST00000529327 739 ntBASIC4.59□□□□□ -1.67
SLC44A3Q8N4M1 OR5AP1P-201ENST00000529730 940 ntBASIC4.59□□□□□ -1.67
SLC44A3Q8N4M1 AC022878.1-201ENST00000530684 149 ntBASIC4.59□□□□□ -1.67
SLC44A3Q8N4M1 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.59□□□□□ -1.67
SLC44A3Q8N4M1 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC4.59□□□□□ -1.67
SLC44A3Q8N4M1 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 773.6 ms