Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 SEPT7P2-202ENST00000398921 823 ntBASIC3.72□□□□□ -1.81
VPS8Q8N3P4 MIR887-201ENST00000401258 79 ntBASIC3.72□□□□□ -1.81
VPS8Q8N3P4 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.72□□□□□ -1.81
VPS8Q8N3P4 ATG3P1-201ENST00000419507 911 ntBASIC3.72□□□□□ -1.81
VPS8Q8N3P4 IFNWP4-201ENST00000453148 294 ntBASIC3.72□□□□□ -1.81
VPS8Q8N3P4 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC3.72□□□□□ -1.81
VPS8Q8N3P4 AC005921.1-201ENST00000510589 286 ntBASIC3.72□□□□□ -1.81
VPS8Q8N3P4 RNA5SP24-201ENST00000516478 95 ntBASIC3.72□□□□□ -1.81
VPS8Q8N3P4 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
VPS8Q8N3P4 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.72□□□□□ -1.81
VPS8Q8N3P4 RN7SL371P-201ENST00000578099 267 ntBASIC3.72□□□□□ -1.81
VPS8Q8N3P4 MIR5007-201ENST00000583098 95 ntBASIC3.72□□□□□ -1.81
VPS8Q8N3P4 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
VPS8Q8N3P4 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC3.72□□□□□ -1.81
VPS8Q8N3P4 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
VPS8Q8N3P4 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.72□□□□□ -1.81
VPS8Q8N3P4 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
VPS8Q8N3P4 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
VPS8Q8N3P4 DYNLT3P1-201ENST00000378574 347 ntBASIC3.71□□□□□ -1.82
VPS8Q8N3P4 AL591416.1-201ENST00000404015 867 ntBASIC3.71□□□□□ -1.82
VPS8Q8N3P4 HMGN1P5-201ENST00000448591 263 ntBASIC3.71□□□□□ -1.82
VPS8Q8N3P4 AC233982.1-201ENST00000451247 436 ntBASIC3.71□□□□□ -1.82
VPS8Q8N3P4 AC021269.2-201ENST00000532318 330 ntBASIC3.71□□□□□ -1.82
VPS8Q8N3P4 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.71□□□□□ -1.82
VPS8Q8N3P4 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.71□□□□□ -1.82
VPS8Q8N3P4 AC025281.1-201ENST00000567026 265 ntBASIC3.71□□□□□ -1.82
VPS8Q8N3P4 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
VPS8Q8N3P4 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC3.71□□□□□ -1.82
VPS8Q8N3P4 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
VPS8Q8N3P4 AC066616.2-201ENST00000559334 1481 ntBASIC3.7□□□□□ -1.82
VPS8Q8N3P4 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.7□□□□□ -1.82
VPS8Q8N3P4 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.7□□□□□ -1.82
VPS8Q8N3P4 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.7□□□□□ -1.82
VPS8Q8N3P4 RPL7P53-201ENST00000421245 739 ntBASIC3.7□□□□□ -1.82
VPS8Q8N3P4 SEC63P1-201ENST00000425785 1258 ntBASIC3.7□□□□□ -1.82
VPS8Q8N3P4 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.7□□□□□ -1.82
VPS8Q8N3P4 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
VPS8Q8N3P4 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.7□□□□□ -1.82
VPS8Q8N3P4 AC008565.1-201ENST00000509046 885 ntBASIC3.7□□□□□ -1.82
VPS8Q8N3P4 AC093908.1-201ENST00000623125 8092 ntBASIC3.7□□□□□ -1.82
VPS8Q8N3P4 AC064859.1-201ENST00000624741 174 ntBASIC3.7□□□□□ -1.82
VPS8Q8N3P4 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.7□□□□□ -1.82
VPS8Q8N3P4 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
VPS8Q8N3P4 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
VPS8Q8N3P4 ELF2P3-201ENST00000445099 1506 ntBASIC3.7□□□□□ -1.82
VPS8Q8N3P4 DEFA7P-201ENST00000382676 285 ntBASIC3.7□□□□□ -1.82
VPS8Q8N3P4 RSL24D1P4-201ENST00000400938 484 ntBASIC3.7□□□□□ -1.82
VPS8Q8N3P4 MIR1261-201ENST00000408659 82 ntBASIC3.7□□□□□ -1.82
VPS8Q8N3P4 AL138785.1-201ENST00000425821 331 ntBASIC3.7□□□□□ -1.82
VPS8Q8N3P4 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC3.7□□□□□ -1.82
VPS8Q8N3P4 AL353597.2-202ENST00000434901 373 ntBASIC3.7□□□□□ -1.82
VPS8Q8N3P4 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.7□□□□□ -1.82
VPS8Q8N3P4 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.7□□□□□ -1.82
VPS8Q8N3P4 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.7□□□□□ -1.82
VPS8Q8N3P4 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.7□□□□□ -1.82
VPS8Q8N3P4 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.7□□□□□ -1.82
VPS8Q8N3P4 NF1P5-201ENST00000588287 448 ntBASIC3.7□□□□□ -1.82
VPS8Q8N3P4 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC3.7□□□□□ -1.82
VPS8Q8N3P4 AL645944.1-201ENST00000603857 493 ntBASIC3.7□□□□□ -1.82
VPS8Q8N3P4 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC3.7□□□□□ -1.82
VPS8Q8N3P4 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC3.7□□□□□ -1.82
VPS8Q8N3P4 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
VPS8Q8N3P4 ZNF658B-202ENST00000615961 3375 ntBASIC3.69□□□□□ -1.82
VPS8Q8N3P4 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
VPS8Q8N3P4 XIAPP3-201ENST00000312918 795 ntBASIC3.69□□□□□ -1.82
VPS8Q8N3P4 RNU4-53P-201ENST00000410828 140 ntBASIC3.69□□□□□ -1.82
VPS8Q8N3P4 AC105402.1-201ENST00000413336 545 ntBASIC3.69□□□□□ -1.82
VPS8Q8N3P4 SAR1AP4-201ENST00000429225 591 ntBASIC3.69□□□□□ -1.82
VPS8Q8N3P4 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.69□□□□□ -1.82
VPS8Q8N3P4 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC3.69□□□□□ -1.82
VPS8Q8N3P4 AC092013.1-201ENST00000438795 332 ntBASIC3.69□□□□□ -1.82
VPS8Q8N3P4 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.69□□□□□ -1.82
VPS8Q8N3P4 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.69□□□□□ -1.82
VPS8Q8N3P4 RN7SL499P-201ENST00000481141 276 ntBASIC3.69□□□□□ -1.82
VPS8Q8N3P4 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.69□□□□□ -1.82
VPS8Q8N3P4 COX6B1P6-201ENST00000522347 255 ntBASIC3.69□□□□□ -1.82
VPS8Q8N3P4 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.69□□□□□ -1.82
VPS8Q8N3P4 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC3.69□□□□□ -1.82
VPS8Q8N3P4 OR4H12P-201ENST00000556269 907 ntBASIC3.69□□□□□ -1.82
VPS8Q8N3P4 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.69□□□□□ -1.82
VPS8Q8N3P4 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.69□□□□□ -1.82
VPS8Q8N3P4 AC007938.3-201ENST00000604965 623 ntBASIC3.69□□□□□ -1.82
VPS8Q8N3P4 AC087241.4-201ENST00000612441 480 ntBASIC3.69□□□□□ -1.82
VPS8Q8N3P4 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC3.69□□□□□ -1.82
VPS8Q8N3P4 AC063923.1-201ENST00000478982 1619 ntBASIC3.69□□□□□ -1.82
VPS8Q8N3P4 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
VPS8Q8N3P4 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
VPS8Q8N3P4 MIR21-201ENST00000362134 72 ntBASIC3.68□□□□□ -1.82
VPS8Q8N3P4 U8.8-201ENST00000365399 135 ntBASIC3.68□□□□□ -1.82
VPS8Q8N3P4 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
VPS8Q8N3P4 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.68□□□□□ -1.82
VPS8Q8N3P4 AC243772.1-201ENST00000451620 410 ntBASIC3.68□□□□□ -1.82
VPS8Q8N3P4 HSPE1P22-201ENST00000456856 327 ntBASIC3.68□□□□□ -1.82
VPS8Q8N3P4 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.68□□□□□ -1.82
VPS8Q8N3P4 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC3.68□□□□□ -1.82
VPS8Q8N3P4 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
VPS8Q8N3P4 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC3.68□□□□□ -1.82
VPS8Q8N3P4 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.68□□□□□ -1.82
VPS8Q8N3P4 AC009452.1-201ENST00000640823 606 ntBASIC3.68□□□□□ -1.82
VPS8Q8N3P4 MTND5P6-201ENST00000422338 1798 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms